CsaV3_6G031060 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G031060
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	thioredoxin-like
Location	chr6: 17305185 .. 17308227 (-)
RNA-Seq Expression	CsaV3_6G031060
Synteny	CsaV3_6G031060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACTCGACAACTGTATACAACTGAGCACCGCCGCCACCATGTGCGCCGCCGCTTCCATACCCAAATCTCACTATTTCTCTTCAACCACAAATTACCCTCAAAAAACATCCTTCTCCACCCTCTCCCTTCAACGCCTTAACAAATCTCCCACGCCCACTTTCAGAAAACCCTTCTCCCTCACGTGCCAAGCCCGTGGAGCCGTCGACGACGGTAAGTCTTTCCATCCATTCATTTATGACTTGTTCTTACTTTCTTTGGGTTTATGGGGTTTGTGGGGTTTGTGGGGTTTGATGGGATTTTGTTGTTTGTTAGTTCAGTGAAAGAAGTAACAGAATCGAGTTGGAATAATTTGGTGGTGGAGAATCAAAAGGCTGTTTTGGTTGAATTTTGGGCACCATGGTGTGGACCTTGTAAGATAATTGAGCCAGTGATTAAGGAATTGGCAGCAGAATATGCTGGGAAGATTGTGTGTTTGAAGCTTAATACGGATCTCAGTCCAAATGTGGCTTCTAAATATGGGATTAGAAGTATTCCTACGGTTCTGTTTTTTAAGAATGGAGAGAAGAGAGAAAGTGTTATTGGGGCTGTGCCTAAATCTACTTTGACTGCCTCCATTGATAAGTATATTGAGGTTTGATTTTCAAGAATCCCCTCTTATCCAATTTCACCATATACCCTTTCTTCCAATCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCTTGTATATGTATATCATCTTGTGTAGAATTGGGAAAACTTTTTGTCCATCTCTTCTTTAATTGTTTCTGTTGTAACGATGATTTTCTTTTTCTACTTTGTGTGTTTCACTCATTAGTGTTCCAATTGTTCATTCTCAGACTCAAAAAAATTAA

mRNA sequence

ATGGCACTCGACAACTGTATACAACTGAGCACCGCCGCCACCATGTGCGCCGCCGCTTCCATACCCAAATCTCACTATTTCTCTTCAACCACAAATTACCCTCAAAAAACATCCTTCTCCACCCTCTCCCTTCAACGCCTTAACAAATCTCCCACGCCCACTTTCAGAAAACCCTTCTCCCTCACGTGCCAAGCCCGTGGAGCCGTCGACGACGTGAAAGAAGTAACAGAATCGAGTTGGAATAATTTGGTGGTGGAGAATCAAAAGGCTGTTTTGGTTGAATTTTGGGCACCATGGTGTGGACCTTGTAAGATAATTGAGCCAGTGATTAAGGAATTGGCAGCAGAATATGCTGGGAAGATTGTGTGTTTGAAGCTTAATACGGATCTCAGTCCAAATGTGGCTTCTAAATATGGGATTAGAAGTATTCCTACGGTTCTGTTTTTTAAGAATGGAGAGAAGAGAGAAAGTGTTATTGGGGCTGTGCCTAAATCTACTTTGACTGCCTCCATTGATAAGTATATTGAGACTCAAAAAAATTAA

Coding sequence (CDS)

ATGGCACTCGACAACTGTATACAACTGAGCACCGCCGCCACCATGTGCGCCGCCGCTTCCATACCCAAATCTCACTATTTCTCTTCAACCACAAATTACCCTCAAAAAACATCCTTCTCCACCCTCTCCCTTCAACGCCTTAACAAATCTCCCACGCCCACTTTCAGAAAACCCTTCTCCCTCACGTGCCAAGCCCGTGGAGCCGTCGACGACGTGAAAGAAGTAACAGAATCGAGTTGGAATAATTTGGTGGTGGAGAATCAAAAGGCTGTTTTGGTTGAATTTTGGGCACCATGGTGTGGACCTTGTAAGATAATTGAGCCAGTGATTAAGGAATTGGCAGCAGAATATGCTGGGAAGATTGTGTGTTTGAAGCTTAATACGGATCTCAGTCCAAATGTGGCTTCTAAATATGGGATTAGAAGTATTCCTACGGTTCTGTTTTTTAAGAATGGAGAGAAGAGAGAAAGTGTTATTGGGGCTGTGCCTAAATCTACTTTGACTGCCTCCATTGATAAGTATATTGAGACTCAAAAAAATTAA

Protein sequence

MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPTFRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIETQKN*

Homology

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BLAST of CsaV3_6G031060 vs. NCBI nr
Match: XP_004150725.2 (thioredoxin M-type, chloroplastic [Cucumis sativus] >KAE8647190.1 hypothetical protein Csa_019038 [Cucumis sativus])

HSP 1 Score: 362.5 bits (929), Expect = 2.2e-96
Identity = 180/180 (100.00%), Postives = 180/180 (100.00%), Query Frame = 0


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPTFRKPFS 60
           MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPTFRKPFS
Sbjct: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPTFRKPFS 60

Query: 61  LTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK 120
           LTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK
Sbjct: 61  LTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK 120

Query: 121 IVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIETQKN 180
           IVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIETQKN
Sbjct: 121 IVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIETQKN 180

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BLAST of CsaV3_6G031060 vs. NCBI nr
Match: XP_016899386.1 (PREDICTED: thioredoxin-like [Cucumis melo] >KAA0058857.1 thioredoxin-like [Cucumis melo var. makuwa] >TYK23765.1 thioredoxin-like [Cucumis melo var. makuwa])

HSP 1 Score: 339.3 bits (869), Expect = 2.0e-89
Identity = 168/176 (95.45%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPTFRKPFS 60
           MALDNCIQLSTAATMCAAASIPKSHYFSST N+PQK SFSTLSLQRLNK PTPTFRKPFS
Sbjct: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTANFPQKLSFSTLSLQRLNKFPTPTFRKPFS 60

Query: 61  LTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK 120
           +TCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK
Sbjct: 61  VTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK 120

Query: 121 IVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIE 177
           I CLKLNTD+SPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTL ASIDKYIE
Sbjct: 121 IECLKLNTDVSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLAASIDKYIE 176

[Close]

BLAST of CsaV3_6G031060 vs. NCBI nr
Match: XP_038884238.1 (thioredoxin M-type, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 291.2 bits (744), Expect = 6.2e-75
Identity = 151/180 (83.89%), Postives = 159/180 (88.33%), Query Frame = 0


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFS----TLSLQRLNKSPTPTFR 60
           MALDNCIQLSTAA MCA  S PKSH F S  N+PQKTSFS    TL L R +   + TFR
Sbjct: 1   MALDNCIQLSTAAAMCATTSRPKSHLFPS--NFPQKTSFSNKLPTLRL-RFSTPSSSTFR 60

Query: 61  KPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAE 120
           K FS+TCQARGAVDDVKEVTESSWNNLVVE+QKAVLVEFWAPWCGPCKIIEPVIKELAAE
Sbjct: 61  KSFSVTCQARGAVDDVKEVTESSWNNLVVESQKAVLVEFWAPWCGPCKIIEPVIKELAAE 120

Query: 121 YAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIE 177
           YAGKIVCLKLNTD+SPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTL A+IDKY+E
Sbjct: 121 YAGKIVCLKLNTDVSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLAATIDKYVE 177

[Close]

BLAST of CsaV3_6G031060 vs. NCBI nr
Match: XP_022989806.1 (uncharacterized protein LOC111486882 [Cucurbita maxima])

HSP 1 Score: 268.9 bits (686), Expect = 3.3e-68
Identity = 143/190 (75.26%), Postives = 154/190 (81.05%), Query Frame = 0


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPT-------- 60
           MALDNCIQLSTAA M    SIPKSH FSST  + QKT   TLSLQRLNK PT        
Sbjct: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSST--FHQKT---TLSLQRLNKFPTSIARFKSF 60

Query: 61  ------PTFRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKII 120
                  TF K  S+TC+ARGAVDDVKEVTESSWN LVVE++K VLVEFWAPWCGPCK+I
Sbjct: 61  SPSTSVSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMI 120

Query: 121 EPVIKELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKST 177
           EPVI+ELA +YAGKIVCLKLNTD SPNVASKYGIRSIPTVLFFKNG+KRE VIGAVPKST
Sbjct: 121 EPVIRELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKST 180

[Close]

BLAST of CsaV3_6G031060 vs. NCBI nr
Match: KAG6602152.1 (hypothetical protein SDJN03_07385, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 266.5 bits (680), Expect = 1.6e-67
Identity = 142/190 (74.74%), Postives = 153/190 (80.53%), Query Frame = 0


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPT------ 60
           MALDNCIQLSTAA M    SIPKSH FSST  + QK    TLSLQRLNK PT T      
Sbjct: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSST--FHQK---PTLSLQRLNKFPTTTARFKSF 60

Query: 61  --------FRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKII 120
                   F K  S+TC+ARGAVDDVKEVTESSWN LVVE++K VLVEFWAPWCGPCK+I
Sbjct: 61  SPSTSVSSFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMI 120

Query: 121 EPVIKELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKST 177
           EPVI+ELA +YAGKIVCLKLNTD SPNVASKYGIRSIPTVLFFKNG+KRE VIGAVPKST
Sbjct: 121 EPVIRELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKST 180

[Close]

BLAST of CsaV3_6G031060 vs. ExPASy Swiss-Prot
Match: P07591 (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=2)

HSP 1 Score: 183.7 bits (465), Expect = 1.8e-45
Identity = 98/181 (54.14%), Postives = 128/181 (70.72%), Query Frame = 0


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYF--SSTTNYPQ----KTSFSTLSLQRLNKSPTPT 60
           MA++NC+QLST+A++   A     H+   SS  N P     K SF  LS    + SP   
Sbjct: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPR-Q 60

Query: 61  FRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELA 120
           FR   S+ C+A  AV +V++V +SSW   V+E++  V+V+FWAPWCGPCK+I PVI ELA
Sbjct: 61  FRYS-SVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELA 120

Query: 121 AEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKY 176
            EY+GKI   KLNTD +P +A++Y IRSIPTVLFFKNGE++ES+IGAVPKSTLT SI+KY
Sbjct: 121 KEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKY 179

[Close]

BLAST of CsaV3_6G031060 vs. ExPASy Swiss-Prot
Match: Q41864 (Thioredoxin M-type, chloroplastic OS=Zea mays OX=4577 GN=TRM1 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.6e-41
Identity = 92/175 (52.57%), Postives = 114/175 (65.14%), Query Frame = 0


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPTFRKPFS 60
           MA++ C +    A    A +  K          P K + + LS+ R+        R+P  
Sbjct: 1   MAMETCFR----AWALHAPAGSKDRLLVGNLVLPSKRALAPLSVGRV------ATRRPRH 60

Query: 61  LTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK 120
           + CQ++ AVD+V    E +W+ LV+  +  VLVEFWAPWCGPC++I PVI ELA +YAGK
Sbjct: 61  V-CQSKNAVDEVVVADEKNWDGLVMACETPVLVEFWAPWCGPCRMIAPVIDELAKDYAGK 120

Query: 121 IVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYI 176
           I C K+NTD SPNVAS YGIRSIPTVL FK GEK+ESVIGAVPKSTLT  IDKYI
Sbjct: 121 ITCCKVNTDDSPNVASTYGIRSIPTVLIFKGGEKKESVIGAVPKSTLTTLIDKYI 164

[Close]

BLAST of CsaV3_6G031060 vs. ExPASy Swiss-Prot
Match: P48384 (Thioredoxin M-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 4.6e-41
Identity = 75/111 (67.57%), Postives = 95/111 (85.59%), Query Frame = 0


Query: 65  ARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGKIVCL 124
           AR AV++V+ V +SSW+ LV+ ++  VLV+FWAPWCGPC++I P+I ELA EYAGKI C 
Sbjct: 62  AREAVNEVQVVNDSSWDELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCY 121

Query: 125 KLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYI 176
           KLNTD SPN A+KYGIRSIPTVLFFKNGE+++SVIGAVPK+TL+  ++KYI
Sbjct: 122 KLNTDESPNTATKYGIRSIPTVLFFKNGERKDSVIGAVPKATLSEKVEKYI 172

[Close]

BLAST of CsaV3_6G031060 vs. ExPASy Swiss-Prot
Match: Q9ZP20 (Thioredoxin M5, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TRXM PE=2 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.3e-40
Identity = 78/138 (56.52%), Postives = 98/138 (71.01%), Query Frame = 0


Query: 40  STLSLQRLNKSPTPTFRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPW 99
           S+ S  RL+ +     R      CQ    VD+V    E +W+++V+ ++  VLVEFWAPW
Sbjct: 35  SSQSKPRLSVASPSPLRPASRFACQCSNVVDEVVVADEKNWDSMVLGSEAPVLVEFWAPW 94

Query: 100 CGPCKIIEPVIKELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVI 159
           CGPC++I PVI ELA EY GKI C K+NTD SPN+A+ YGIRSIPTVL FKNGEK+ESVI
Sbjct: 95  CGPCRMIAPVIDELAKEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKKESVI 154

Query: 160 GAVPKSTLTASIDKYIET 178
           GAVPK+TL   IDKY+ +
Sbjct: 155 GAVPKTTLATIIDKYVSS 172

[Close]

BLAST of CsaV3_6G031060 vs. ExPASy Swiss-Prot
Match: Q9ZP21 (Thioredoxin M-type, chloroplastic OS=Triticum aestivum OX=4565 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.9e-40
Identity = 76/127 (59.84%), Postives = 93/127 (73.23%), Query Frame = 0


Query: 49  KSPTPTFRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEP 108
           KS     R+P    C+ +  VD+V    E +W+N+V+  +  VLVEFWAPWCGPC++I P
Sbjct: 47  KSALVAARRPSRFVCKCKNVVDEVIVADEKNWDNMVIACESPVLVEFWAPWCGPCRMIAP 106

Query: 109 VIKELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLT 168
           VI ELA +Y GKI C K+NTD  PN+AS YGIRSIPTVL FK+GEK+ESVIGAVPK+TL 
Sbjct: 107 VIDELAKDYVGKIKCCKVNTDDCPNIASTYGIRSIPTVLMFKDGEKKESVIGAVPKTTLC 166

Query: 169 ASIDKYI 176
             IDKYI
Sbjct: 167 TIIDKYI 173

[Close]

BLAST of CsaV3_6G031060 vs. ExPASy TrEMBL
Match: A0A0A0KIC1 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G343710 PE=4 SV=1)

HSP 1 Score: 354.0 bits (907), Expect = 3.8e-94
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPTFRKPFS 60
           MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPTFRKPFS
Sbjct: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPTFRKPFS 60

Query: 61  LTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK 120
           LTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK
Sbjct: 61  LTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK 120

Query: 121 IVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIE 177
           IVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIE
Sbjct: 121 IVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIE 176

[Close]

BLAST of CsaV3_6G031060 vs. ExPASy TrEMBL
Match: A0A5D3DJJ9 (Thioredoxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00860 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 9.6e-90
Identity = 168/176 (95.45%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPTFRKPFS 60
           MALDNCIQLSTAATMCAAASIPKSHYFSST N+PQK SFSTLSLQRLNK PTPTFRKPFS
Sbjct: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTANFPQKLSFSTLSLQRLNKFPTPTFRKPFS 60

Query: 61  LTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK 120
           +TCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK
Sbjct: 61  VTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK 120

Query: 121 IVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIE 177
           I CLKLNTD+SPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTL ASIDKYIE
Sbjct: 121 IECLKLNTDVSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLAASIDKYIE 176

[Close]

BLAST of CsaV3_6G031060 vs. ExPASy TrEMBL
Match: A0A1S4DTR8 (thioredoxin-like OS=Cucumis melo OX=3656 GN=LOC107990489 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 9.6e-90
Identity = 168/176 (95.45%), Postives = 171/176 (97.16%), Query Frame = 0


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPTFRKPFS 60
           MALDNCIQLSTAATMCAAASIPKSHYFSST N+PQK SFSTLSLQRLNK PTPTFRKPFS
Sbjct: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTANFPQKLSFSTLSLQRLNKFPTPTFRKPFS 60

Query: 61  LTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK 120
           +TCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK
Sbjct: 61  VTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK 120

Query: 121 IVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIE 177
           I CLKLNTD+SPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTL ASIDKYIE
Sbjct: 121 IECLKLNTDVSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLAASIDKYIE 176

[Close]

BLAST of CsaV3_6G031060 vs. ExPASy TrEMBL
Match: A0A6J1JL70 (uncharacterized protein LOC111486882 OS=Cucurbita maxima OX=3661 GN=LOC111486882 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.6e-68
Identity = 143/190 (75.26%), Postives = 154/190 (81.05%), Query Frame = 0


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPT-------- 60
           MALDNCIQLSTAA M    SIPKSH FSST  + QKT   TLSLQRLNK PT        
Sbjct: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSST--FHQKT---TLSLQRLNKFPTSIARFKSF 60

Query: 61  ------PTFRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKII 120
                  TF K  S+TC+ARGAVDDVKEVTESSWN LVVE++K VLVEFWAPWCGPCK+I
Sbjct: 61  SPSTSVSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMI 120

Query: 121 EPVIKELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKST 177
           EPVI+ELA +YAGKIVCLKLNTD SPNVASKYGIRSIPTVLFFKNG+KRE VIGAVPKST
Sbjct: 121 EPVIRELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKST 180

[Close]

BLAST of CsaV3_6G031060 vs. ExPASy TrEMBL
Match: A0A6J1GXN7 (uncharacterized protein LOC111457772 OS=Cucurbita moschata OX=3662 GN=LOC111457772 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 7.9e-68
Identity = 142/190 (74.74%), Postives = 153/190 (80.53%), Query Frame = 0


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPT-------- 60
           MALDNCIQLSTAA M    SIPKSH FSST  + QK    TLSLQRLNK PT        
Sbjct: 1   MALDNCIQLSTAAAMYGTTSIPKSHPFSST--FHQK---PTLSLQRLNKFPTSTARFKSF 60

Query: 61  ------PTFRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKII 120
                  TF K  S+TC+ARGAVDDVKEVTESSWN LVVE++K VLVEFWAPWCGPCK+I
Sbjct: 61  SPSTSVSTFGKSRSVTCKARGAVDDVKEVTESSWNELVVESEKTVLVEFWAPWCGPCKMI 120

Query: 121 EPVIKELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKST 177
           EPVI+ELA +YAGKIVCLKLNTD SPNVASKYGIRSIPTVLFFKNG+KRE VIGAVPKST
Sbjct: 121 EPVIRELAQDYAGKIVCLKLNTDASPNVASKYGIRSIPTVLFFKNGQKREGVIGAVPKST 180

[Close]

BLAST of CsaV3_6G031060 vs. TAIR 10
Match: AT4G03520.1 (Thioredoxin superfamily protein )

HSP 1 Score: 148.3 bits (373), Expect = 6.0e-36
Identity = 64/140 (45.71%), Postives = 101/140 (72.14%), Query Frame = 0


Query: 36  KTSFSTLSLQRLNKSPTPTFRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEF 95
           + S S  SL  +++      R+  ++ C+A+    D++ V +S+W++LV++    V+V+F
Sbjct: 48  RLSLSPASLTSIHQPRVSRLRR--AVVCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDF 107

Query: 96  WAPWCGPCKIIEPVIKELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKR 155
           WAPWCGPCK+I+P++ +LA  Y GKI   KLNTD SPN   +YG+RSIPT++ F  GEK+
Sbjct: 108 WAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKK 167

Query: 156 ESVIGAVPKSTLTASIDKYI 176
           +++IGAVPK+TLT+S+DK++
Sbjct: 168 DTIIGAVPKTTLTSSLDKFL 185

[Close]

BLAST of CsaV3_6G031060 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 140.2 bits (352), Expect = 1.6e-33
Identity = 58/118 (49.15%), Postives = 88/118 (74.58%), Query Frame = 0


Query: 61  LTCQAR---GAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEY 120
           + C+A+    A  +V  +++S W   V+E+   VLVEFWAPWCGPC++I P++ +LA ++
Sbjct: 74  IACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDF 133

Query: 121 AGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYI 176
           AGK    K+NTD SPN A++YGIRS+PTV+ FK GEK++S+IGAVP+ TL  +I++++
Sbjct: 134 AGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191

[Close]

BLAST of CsaV3_6G031060 vs. TAIR 10
Match: AT1G03680.1 (thioredoxin M-type 1 )

HSP 1 Score: 137.9 bits (346), Expect = 8.1e-33
Identity = 63/143 (44.06%), Postives = 98/143 (68.53%), Query Frame = 0


Query: 34  PQKTSFST-LSLQRLNKSPTPTFRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVL 93
           P+ +   T +SL  L+K+ +   R    + C+A+     +  V +S+W++LV++  + V 
Sbjct: 38  PESSGLRTRVSLSSLSKN-SRVSRLRRGVICEAQDTATGIPVVNDSTWDSLVLKADEPVF 97

Query: 94  VEFWAPWCGPCKIIEPVIKELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNG 153
           V+FWAPWCGPCK+I+P++ ELA +YAG+    KLNTD SP    +YG+RSIPT++ F NG
Sbjct: 98  VDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQYGVRSIPTIMIFVNG 157

Query: 154 EKRESVIGAVPKSTLTASIDKYI 176
           EK++++IGAV K TL  SI+K++
Sbjct: 158 EKKDTIIGAVSKDTLATSINKFL 179

[Close]

BLAST of CsaV3_6G031060 vs. TAIR 10
Match: AT2G15570.2 (Thioredoxin superfamily protein )

HSP 1 Score: 112.5 bits (280), Expect = 3.7e-25
Identity = 61/159 (38.36%), Postives = 95/159 (59.75%), Query Frame = 0


Query: 24  SHYFSSTTNYPQKTSFSTLSLQ---RLNKSPTPTFRKPFSLTC--QARGAVDDVKEVTES 83
           + + SS +     TSFS  SL+   R +   +   R   S  C   +R A     EVT+ 
Sbjct: 20  ARHISSPSRLFPVTSFSPRSLRFSDRRSLLSSSASRLRLSPLCVRDSRAAA----EVTQR 79

Query: 84  SWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGKIVCLKLNTDLSPNVASKY 143
           SW + V++++  VLVEF+  WCGPC+++  +I E+A +YAGK+ C  LN D    VA +Y
Sbjct: 80  SWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEY 139

Query: 144 GIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIET 178
            I+++P VL FKNGEKRES++G +PK    ++I++ + +
Sbjct: 140 EIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVLNS 174

[Close]

BLAST of CsaV3_6G031060 vs. TAIR 10
Match: AT2G15570.1 (Thioredoxin superfamily protein )

HSP 1 Score: 112.1 bits (279), Expect = 4.8e-25
Identity = 61/159 (38.36%), Postives = 95/159 (59.75%), Query Frame = 0


Query: 24  SHYFSSTTNYPQKTSFSTLSLQ---RLNKSPTPTFRKPFSLTC--QARGAVDDVKEVTES 83
           + + SS +     TSFS  SL+   R +   +   R   S  C   +R A     EVT+ 
Sbjct: 20  ARHISSPSRLFPVTSFSPRSLRFSDRRSLLSSSASRLRLSPLCVRDSRAA-----EVTQR 79

Query: 84  SWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGKIVCLKLNTDLSPNVASKY 143
           SW + V++++  VLVEF+  WCGPC+++  +I E+A +YAGK+ C  LN D    VA +Y
Sbjct: 80  SWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEY 139

Query: 144 GIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIET 178
            I+++P VL FKNGEKRES++G +PK    ++I++ + +
Sbjct: 140 EIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVLNS 173

The following BLAST results are available for this feature:

BLAST of CsaV3_6G031060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150725.2	2.2e-96	100.00	thioredoxin M-type, chloroplastic [Cucumis sativus] >KAE8647190.1 hypothetical p...	[more]
XP_016899386.1	2.0e-89	95.45	PREDICTED: thioredoxin-like [Cucumis melo] >KAA0058857.1 thioredoxin-like [Cucum...	[more]
XP_038884238.1	6.2e-75	83.89	thioredoxin M-type, chloroplastic-like [Benincasa hispida]	[more]
XP_022989806.1	3.3e-68	75.26	uncharacterized protein LOC111486882 [Cucurbita maxima]	[more]
KAG6602152.1	1.6e-67	74.74	hypothetical protein SDJN03_07385, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CsaV3_6G031060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P07591	1.8e-45	54.14	Thioredoxin M-type, chloroplastic OS=Spinacia oleracea OX=3562 PE=1 SV=2	[more]
Q41864	4.6e-41	52.57	Thioredoxin M-type, chloroplastic OS=Zea mays OX=4577 GN=TRM1 PE=2 SV=1	[more]
P48384	4.6e-41	67.57	Thioredoxin M-type, chloroplastic OS=Pisum sativum OX=3888 PE=2 SV=1	[more]
Q9ZP20	2.3e-40	56.52	Thioredoxin M5, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TRXM P...	[more]
Q9ZP21	3.9e-40	59.84	Thioredoxin M-type, chloroplastic OS=Triticum aestivum OX=4565 PE=2 SV=1	[more]

BLAST of CsaV3_6G031060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIC1	3.8e-94	100.00	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G343710...	[more]
A0A5D3DJJ9	9.6e-90	95.45	Thioredoxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1607G00...	[more]
A0A1S4DTR8	9.6e-90	95.45	thioredoxin-like OS=Cucumis melo OX=3656 GN=LOC107990489 PE=4 SV=1	[more]
A0A6J1JL70	1.6e-68	75.26	uncharacterized protein LOC111486882 OS=Cucurbita maxima OX=3661 GN=LOC111486882...	[more]
A0A6J1GXN7	7.9e-68	74.74	uncharacterized protein LOC111457772 OS=Cucurbita moschata OX=3662 GN=LOC1114577...	[more]

BLAST of CsaV3_6G031060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03520.1	6.0e-36	45.71	Thioredoxin superfamily protein	[more]
AT3G15360.1	1.6e-33	49.15	thioredoxin M-type 4	[more]
AT1G03680.1	8.1e-33	44.06	thioredoxin M-type 1	[more]
AT2G15570.2	3.7e-25	38.36	Thioredoxin superfamily protein	[more]
AT2G15570.1	4.8e-25	38.36	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 139..150 score: 44.63 coord: 99..108 score: 63.28 coord: 91..99 score: 64.57
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 71..180 e-value: 2.7E-35 score: 122.6
None	No IPR available	PANTHER	PTHR45663:SF34	THIOREDOXIN M-TYPE PROTEIN	coord: 26..175
None	No IPR available	PANTHER	PTHR45663	GEO12009P1	coord: 26..175
None	No IPR available	CDD	cd02947	TRX_family	coord: 84..172 e-value: 7.775E-38 score: 123.437
IPR005746	Thioredoxin	TIGRFAM	TIGR01068	TIGR01068	coord: 76..173 e-value: 1.1E-35 score: 119.8
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 72..173 e-value: 3.6E-31 score: 107.2
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 50..176 score: 14.917579
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 92..110
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 60..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G031060.1	CsaV3_6G031060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006662	glycerol ether metabolic process
molecular_function	GO:0015035	protein-disulfide reductase activity