CsaV3_6G028520 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G028520
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 16794943 .. 16795126 (-)
RNA-Seq ExpressionCsaV3_6G028520
SyntenyCsaV3_6G028520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGACACGTAGAAGACAGGGTAAGAGGAAAGATGTGGGAAGGGTGGGCAGACGTGTAAGTCAGGGATTGGTTATTTTTTGTTGAATTCAAACTTTGGGCGGTGGGGACGGCGGCCATGTATTGTGGCAAAGATCAATGCGCTTCACGTACCCACTCCCGAGGTCCGCCGGAAACCAAAATAA

mRNA sequence

ATGAGACACGTAGAAGACAGGACGTGTAAGTCAGGGATTGGTTATTTTTTGTTGAATTCAAACTTTGGGCGGTGGGGACGGCGGCCATGTATTGTGGCAAAGATCAATGCGCTTCACGTACCCACTCCCGAGGTCCGCCGGAAACCAAAATAA

Coding sequence (CDS)

ATGAGACACGTAGAAGACAGGACGTGTAAGTCAGGGATTGGTTATTTTTTGTTGAATTCAAACTTTGGGCGGTGGGGACGGCGGCCATGTATTGTGGCAAAGATCAATGCGCTTCACGTACCCACTCCCGAGGTCCGCCGGAAACCAAAATAA

Protein sequence

MRHVEDRTCKSGIGYFLLNSNFGRWGRRPCIVAKINALHVPTPEVRRKPK*
Homology
[Close]
BLAST of CsaV3_6G028520 vs. NCBI nr
Match: KGN47454.1 (hypothetical protein Csa_021769 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 2.9e-22
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 1  MRHVEDRTCKSGIGYFLLNSNFGRWGRRPCIVAKINALHVPTPEVRRKPK 51
          MRHVEDRTCKSGIGYFLLNSNFGRWGRRPCIVAKINALHVPTPEVRRKPK
Sbjct: 1  MRHVEDRTCKSGIGYFLLNSNFGRWGRRPCIVAKINALHVPTPEVRRKPK 50

[Close]
BLAST of CsaV3_6G028520 vs. ExPASy TrEMBL
Match: A0A0A0KF62 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327440 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-22
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0 

Query: 1  MRHVEDRTCKSGIGYFLLNSNFGRWGRRPCIVAKINALHVPTPEVRRKPK 51
          MRHVEDRTCKSGIGYFLLNSNFGRWGRRPCIVAKINALHVPTPEVRRKPK
Sbjct: 1  MRHVEDRTCKSGIGYFLLNSNFGRWGRRPCIVAKINALHVPTPEVRRKPK 50

The following BLAST results are available for this feature:
BLAST of CsaV3_6G028520 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47454.12.9e-22100.00hypothetical protein Csa_021769 [Cucumis sativus][more]
BLAST of CsaV3_6G028520 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G028520 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KF621.4e-22100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327440 PE=4 SV=1[more]
BLAST of CsaV3_6G028520 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G028520.1CsaV3_6G028520.1mRNA