CsaV3_6G028410 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATAAAAAATTATCTAAAGTTTCATTGGGGGAGGCTGATTTCCAACTCTTTTATGCTTTTGTCGTTGATAATGGGGACGGGGAGATTGCTTTAACCGGAATACGGGATTCTCACCCCGTGTTTTCAACGCACAGATTGAAGTTCCGACTCCCTCAGATTATCACCTCCACTCCCCAACGCCGCCGTCTTCTTCGACATTGGATTCAAGTCCACCTTCCCGCCCTCCCTCCTACTCTTTCCCTATCTCCCTACTCTTCTTCCCGGTCCTTGTTGCACAACCTAACTCTTCTTCCCCGGCTACAACTTCCTTCTTATCAACTCCACTGTCTCTGAAGATCTAGACTCGAAATTTCGTTTTCATGCTCTTATTGAGTTCTGGTTATTAGGGTTTTCTTTCGCCTTGCCTCCACTTTTCTCACTTCCATTGGCGTACTTCTGCTGAAATTAGAGGTTTAATTTTTTCATTTCTCTATCTTTTTGGCATTTTGGATTCTTCTGCTGTTTCCTTTTTCTCCTCATTCATTGGATTCTTTTTTTTTTTCTGCCTAACATCGTAAATATCGATGCTCTCTGTTTGTTTTGAATTTTTCTTGCTTCTTAACTTTTACCTAGTTTTTTGGAATACGTAACATGGATAAATCAGGAAAAAAAGAATTACGTGCTTCTCCCTGGGTATATATTGATTCGGAAAAAATGTGATTCTTGAATTACTACATGCAATCTTTTCATAGTTGGTTCGGGTTGGGAATGCATGTTAAATTAACTTTGTGATTGATCTTTGTCACTCGTATTCATCTGTCTACCACATTGGTAATGGAGATGAGGGATTTTCTTAAATATGGATTATGGACTTGTATCATCCATCAGATTGTGTTATTTTCGTTTTAGTAAACTCTATTATTTTGATTTTCTATACTCTTTTTTGCTTTTGGACGGCTCTACTTCATTGATAACGCTCTTCACCACAGCTGTACTCTGGAAAATGGGTACTCCTGTCTTGATTTTGTCTCGTTTGGGATCAAGAGATGTTTATATGTTTCTCACAAGAAGAAATACAATAAGTATAGGATTTATTACACAATTGGTCATAAAATCTAAAGAAGTACAACAATAGTTTATAGTTGTAGTCGTGCAATATAGAAGCACACCAACTTACTACATTTCCTTTTTTTTTTTCCCGCAAAGGAACCTTTTACACAACCTTGACTGCAGAAGTTAAAAGGGAAAGGATTGTGAGTGTTAGGTGCACCGTAGTGAAACCTCACCATCAAAATGTGCAAGTTTTGCCTCTAACAACACTGGTCGTGAATGTTTACAACTGATCTCTCTCAGTTATTTTTTATATTTTTATTGTTATTTTTTCTTTTTCTGCAAGGCTAGATTTCGTTTCAATCTATTAATGTGATTGGCCATATTTTGGTGAACTTATTTGTTACAAATCAAAGGGAAAAGAAATCAGCCTTGACTATATACTTCTTTTGTCTACAGGCTACAATCCTGCTTGGTTGCTCTGGACCTCGTATGGTCATTAAAAATGATTGAATTGAATATTTCTTGAAATTGTACATTAAATTCACTTTTCAATGGCTCGTAAGGGTAATCAACAGAAAACAGGGTCAGAGGCCATGCATCGAACAGTAAAAAAAAGGTTCAGATTTGCAGTCCAAGGGGCAAGGAAGAGCACGAGAAATAAAGGTATTTCCCGGAGAGGAACTACCAAATGACAACCAGCATAGTCGACCGTTCGAGGAAGGGATGATGAATAGTGACTCTGGAGAAGGTTTGAAGAATCTAAAAAAGTCTGCAAAGTCCTTGAGAAAAGAAAAACAAGGAATTGAAGGACTTCATGGTCCAGAGGAACCAAATTTTCCCTCCGAAGAATCTGAGAACTGCGATGGAAACAACGGAGGCTCTAGTGTAGGAGAACAATACAAGGGGTCTTCTGGTGATAAGGACCAGGTTCAGGTAGATGGAAGCTTCAGCTTCTTTTTGAATGGAGAACACATCAGAAGTGTGATGGCTAATCTGAATTTTTCGGATAATTTTGGTGAAAAGTTCTGTGGAATCTATGTCATCAATATTTGA ATGAATAAAAAATTATCTAAAGTTTCATTGGGGGAGGCTGATTTCCAACTCTTTTATGCTTTTGTCGTTGATAATGGGGACGGGGAGATTGCTTTAACCGGAATACGGGATTCTCACCCCGTGTTTTCAACGCACAGATTGAAGTTCCGACTCCCTCAGATTATCACCTCCACTCCCCAACGCCGCCGTCTTCTTCGACATTGGATTCAAGTCCACCTTCCCGCCCTCCCTCCTACTCTTTCCCTATCTCCCTACTCTTCTTCCCGGGTTTTCTTTCGCCTTGCCTCCACTTTTCTCACTTCCATTGGCGTACTTCTGCTGAAATTAGAGGCTACAATCCTGCTTGGTTGCTCTGGACCTCGTATGTCCAAGGGGCAAGGAAGAGCACGAGAAATAAAGGTATTTCCCGGAGAGGAACTACCAAATGACAACCAGCATAGTCGACCGTTCGAGGAAGGGATGATGAATAGTGACTCTGGAGAAGGTTTGAAGAATCTAAAAAAGTCTGCAAAGTCCTTGAGAAAAGAAAAACAAGGAATTGAAGGACTTCATGGTCCAGAGGAACCAAATTTTCCCTCCGAAGAATCTGAGAACTGCGATGGAAACAACGGAGGCTCTAGTGTAGGAGAACAATACAAGGGGTCTTCTGGTGATAAGGACCAGGTTCAGGTAGATGGAAGCTTCAGCTTCTTTTTGAATGGAGAACACATCAGAAGTGTGATGGCTAATCTGAATTTTTCGGATAATTTTGGTGAAAAGTTCTGTGGAATCTATGTCATCAATATTTGA ATGAATAAAAAATTATCTAAAGTTTCATTGGGGGAGGCTGATTTCCAACTCTTTTATGCTTTTGTCGTTGATAATGGGGACGGGGAGATTGCTTTAACCGGAATACGGGATTCTCACCCCGTGTTTTCAACGCACAGATTGAAGTTCCGACTCCCTCAGATTATCACCTCCACTCCCCAACGCCGCCGTCTTCTTCGACATTGGATTCAAGTCCACCTTCCCGCCCTCCCTCCTACTCTTTCCCTATCTCCCTACTCTTCTTCCCGGGTTTTCTTTCGCCTTGCCTCCACTTTTCTCACTTCCATTGGCGTACTTCTGCTGAAATTAGAGGCTACAATCCTGCTTGGTTGCTCTGGACCTCGTATGTCCAAGGGGCAAGGAAGAGCACGAGAAATAAAGGTATTTCCCGGAGAGGAACTACCAAATGACAACCAGCATAGTCGACCGTTCGAGGAAGGGATGATGAATAGTGACTCTGGAGAAGGTTTGAAGAATCTAAAAAAGTCTGCAAAGTCCTTGAGAAAAGAAAAACAAGGAATTGAAGGACTTCATGGTCCAGAGGAACCAAATTTTCCCTCCGAAGAATCTGAGAACTGCGATGGAAACAACGGAGGCTCTAGTGTAGGAGAACAATACAAGGGGTCTTCTGGTGATAAGGACCAGGTTCAGGTAGATGGAAGCTTCAGCTTCTTTTTGAATGGAGAACACATCAGAAGTGTGATGGCTAATCTGAATTTTTCGGATAATTTTGGTGAAAAGTTCTGTGGAATCTATGTCATCAATATTTGA MNKKLSKVSLGEADFQLFYAFVVDNGDGEIALTGIRDSHPVFSTHRLKFRLPQIITSTPQRRRLLRHWIQVHLPALPPTLSLSPYSSSRVFFRLASTFLTSIGVLLLKLEATILLGCSGPRMSKGQGRAREIKVFPGEELPNDNQHSRPFEEGMMNSDSGEGLKNLKKSAKSLRKEKQGIEGLHGPEEPNFPSEESENCDGNNGGSSVGEQYKGSSGDKDQVQVDGSFSFFLNGEHIRSVMANLNFSDNFGEKFCGIYVINI* Homology
BLAST of CsaV3_6G028410 vs. NCBI nr
Match: KAE8637117.1 (hypothetical protein CSA_004594 [Cucumis sativus] >KAE8647145.1 hypothetical protein Csa_021772 [Cucumis sativus]) HSP 1 Score: 517.7 bits (1332), Expect = 5.9e-143 Identity = 262/262 (100.00%), Postives = 262/262 (100.00%), Query Frame = 0
BLAST of CsaV3_6G028410 vs. NCBI nr
Match: TYK02968.1 (DnaJ-like protein subfamily C member 14 [Cucumis melo var. makuwa]) HSP 1 Score: 220.3 bits (560), Expect = 1.9e-53 Identity = 115/127 (90.55%), Postives = 120/127 (94.49%), Query Frame = 0
BLAST of CsaV3_6G028410 vs. NCBI nr
Match: XP_038906525.1 (uncharacterized protein LOC120092502 [Benincasa hispida]) HSP 1 Score: 204.9 bits (520), Expect = 8.5e-49 Identity = 102/127 (80.31%), Postives = 115/127 (90.55%), Query Frame = 0
BLAST of CsaV3_6G028410 vs. NCBI nr
Match: KAG6575141.1 (Beta-glucosidase-like SFR2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 183.0 bits (463), Expect = 3.4e-42 Identity = 95/127 (74.80%), Postives = 105/127 (82.68%), Query Frame = 0
BLAST of CsaV3_6G028410 vs. NCBI nr
Match: XP_022959130.1 (uncharacterized protein LOC111460216 [Cucurbita moschata]) HSP 1 Score: 183.0 bits (463), Expect = 3.4e-42 Identity = 95/127 (74.80%), Postives = 105/127 (82.68%), Query Frame = 0
BLAST of CsaV3_6G028410 vs. ExPASy TrEMBL
Match: A0A0A0KGB7 (J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G324860 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 2.9e-63 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of CsaV3_6G028410 vs. ExPASy TrEMBL
Match: A0A5D3BVE8 (DnaJ-like protein subfamily C member 14 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00520 PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 9.4e-54 Identity = 115/127 (90.55%), Postives = 120/127 (94.49%), Query Frame = 0
BLAST of CsaV3_6G028410 vs. ExPASy TrEMBL
Match: A0A6J1H5F2 (uncharacterized protein LOC111460216 OS=Cucurbita moschata OX=3662 GN=LOC111460216 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 1.7e-42 Identity = 95/127 (74.80%), Postives = 105/127 (82.68%), Query Frame = 0
BLAST of CsaV3_6G028410 vs. ExPASy TrEMBL
Match: A0A6J1L0C6 (uncharacterized protein LOC111499224 OS=Cucurbita maxima OX=3661 GN=LOC111499224 PE=4 SV=1) HSP 1 Score: 180.3 bits (456), Expect = 1.1e-41 Identity = 95/127 (74.80%), Postives = 103/127 (81.10%), Query Frame = 0
BLAST of CsaV3_6G028410 vs. ExPASy TrEMBL
Match: A0A6J1CA88 (uncharacterized protein LOC111009645 OS=Momordica charantia OX=3673 GN=LOC111009645 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 5.0e-39 Identity = 90/127 (70.87%), Postives = 108/127 (85.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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