CsaV3_6G027380 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACATTGATAAGACGATCAAAGTGAAAAAATCCTCCTTAGTTGGCAAGTCTGCCATACCAACCAAGAGATTTGATCCAAGTAAGATTTACAAGGAGGATAGAAGTGGGATGCTCCTATTAGATGCCAATTCGGAGAGGAGGTAACTGCCATTTGTACTTCACATTTGGTTTTGATGCCCTCACCCTTAAAAAATGAATTAAGGAATGACAACAGTTATAAACTTCCCTAAAGTGCACGCTTGCATGTTTGGTAAAGTGGATTTGTTTCTAAAATATTCTTTCTTTTAACCTAGGTTAATGGACATGATGAAAAATGTTGCATCGTCAATTACTTTGGAAGACGTAATTAAGAAGCACAAAGTCCCATCTACTCATGCATATTCTTTAAAACATGTAGTGGACAAGACAATTAAGATGGGGAAGTTGGAAGGGTCAGTTGTGGTAAGAAAATTATTAACTTTTGTATCCTTAAAGTGATCTCGTGGTTTCTTATCCCTTAATGGTCTACTGTTTTGGTTGTTAGGCTGTTCGAGCTGCTCTGCGCAAGCTTGAGGAAGGATGTTGCATTGAGGATGCAGAAGCTGTTTGTGAGCCTGAAGTTCTTAACCACATATTTAAGTGGAAG ATGGACATTGATAAGACGATCAAAGTGAAAAAATCCTCCTTAGTTGGCAAGTCTGCCATACCAACCAAGAGATTTGATCCAAGTAAGATTTACAAGGAGGATAGAAGTGGGATGCTCCTATTAGATGCCAATTCGGAGAGGAGGTTAATGGACATGATGAAAAATGTTGCATCGTCAATTACTTTGGAAGACGTAATTAAGAAGCACAAAGTCCCATCTACTCATGCATATTCTTTAAAACATGTAGTGGACAAGACAATTAAGATGGGGAAGTTGGAAGGGTCAGTTGTGGCTGTTCGAGCTGCTCTGCGCAAGCTTGAGGAAGGATGTTGCATTGAGGATGCAGAAGCTGTTTGTGAGCCTGAAGTTCTTAACCACATATTTAAGTGGAAG ATGGACATTGATAAGACGATCAAAGTGAAAAAATCCTCCTTAGTTGGCAAGTCTGCCATACCAACCAAGAGATTTGATCCAAGTAAGATTTACAAGGAGGATAGAAGTGGGATGCTCCTATTAGATGCCAATTCGGAGAGGAGGTTAATGGACATGATGAAAAATGTTGCATCGTCAATTACTTTGGAAGACGTAATTAAGAAGCACAAAGTCCCATCTACTCATGCATATTCTTTAAAACATGTAGTGGACAAGACAATTAAGATGGGGAAGTTGGAAGGGTCAGTTGTGGCTGTTCGAGCTGCTCTGCGCAAGCTTGAGGAAGGATGTTGCATTGAGGATGCAGAAGCTGTTTGTGAGCCTGAAGTTCTTAACCACATATTTAAGTGGAAG MDIDKTIKVKKSSLVGKSAIPTKRFDPSKIYKEDRSGMLLLDANSERRLMDMMKNVASSITLEDVIKKHKVPSTHAYSLKHVVDKTIKMGKLEGSVVAVRAALRKLEEGCCIEDAEAVCEPEVLNHIFKWK Homology
BLAST of CsaV3_6G027380 vs. NCBI nr
Match: KAE8647142.1 (hypothetical protein Csa_009447, partial [Cucumis sativus]) HSP 1 Score: 258.1 bits (658), Expect = 4.2e-65 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of CsaV3_6G027380 vs. NCBI nr
Match: XP_031745059.1 (LOW QUALITY PROTEIN: protein ENHANCED DOWNY MILDEW 2-like [Cucumis sativus]) HSP 1 Score: 258.1 bits (658), Expect = 4.2e-65 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of CsaV3_6G027380 vs. NCBI nr
Match: KAE8637197.1 (hypothetical protein CSA_023064, partial [Cucumis sativus]) HSP 1 Score: 258.1 bits (658), Expect = 4.2e-65 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of CsaV3_6G027380 vs. NCBI nr
Match: KAE8645949.1 (hypothetical protein Csa_018221 [Cucumis sativus]) HSP 1 Score: 258.1 bits (658), Expect = 4.2e-65 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of CsaV3_6G027380 vs. NCBI nr
Match: KAE8646004.1 (hypothetical protein Csa_015488 [Cucumis sativus]) HSP 1 Score: 258.1 bits (658), Expect = 4.2e-65 Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0
BLAST of CsaV3_6G027380 vs. ExPASy Swiss-Prot
Match: F4K3G5 (Protein ENHANCED DOWNY MILDEW 2 OS=Arabidopsis thaliana OX=3702 GN=EDM2 PE=1 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 2.0e-22 Identity = 57/101 (56.44%), Postives = 74/101 (73.27%), Query Frame = 0
BLAST of CsaV3_6G027380 vs. ExPASy TrEMBL
Match: A0A5A7U1N2 (Protein ENHANCED DOWNY MILDEW 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G00430 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.6e-62 Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of CsaV3_6G027380 vs. ExPASy TrEMBL
Match: A0A5D3CCR5 (Protein ENHANCED DOWNY MILDEW 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002750 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.6e-62 Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of CsaV3_6G027380 vs. ExPASy TrEMBL
Match: A0A1S3BHF3 (LOW QUALITY PROTEIN: protein ENHANCED DOWNY MILDEW 2 OS=Cucumis melo OX=3656 GN=LOC103490112 PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 1.6e-62 Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of CsaV3_6G027380 vs. ExPASy TrEMBL
Match: A0A6J1ITQ9 (protein ENHANCED DOWNY MILDEW 2 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480505 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 6.1e-46 Identity = 108/148 (72.97%), Postives = 118/148 (79.73%), Query Frame = 0
BLAST of CsaV3_6G027380 vs. ExPASy TrEMBL
Match: A0A6J1IWB7 (protein ENHANCED DOWNY MILDEW 2 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480505 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 6.1e-46 Identity = 108/148 (72.97%), Postives = 118/148 (79.73%), Query Frame = 0
BLAST of CsaV3_6G027380 vs. TAIR 10
Match: AT5G55390.1 (ENHANCED DOWNY MILDEW 2 ) HSP 1 Score: 106.7 bits (265), Expect = 1.5e-23 Identity = 57/101 (56.44%), Postives = 74/101 (73.27%), Query Frame = 0
BLAST of CsaV3_6G027380 vs. TAIR 10
Match: AT5G55390.2 (ENHANCED DOWNY MILDEW 2 ) HSP 1 Score: 106.7 bits (265), Expect = 1.5e-23 Identity = 57/101 (56.44%), Postives = 74/101 (73.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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