CsaV3_6G024100 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G024100
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	UDP-glucuronate decarboxylase
Location	chr6: 15980209 .. 15983647 (+)
RNA-Seq Expression	CsaV3_6G024100
Synteny	CsaV3_6G024100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGATGAGAGGCAGAGTAAACCGATCGAGAAGAAAAAGGGGAAAGAAATTTGAAATAAAAGAGACCGTTGAGGTTGAAGAAGAGGGAAAAAAAATTGACCGTGGAGGAGAGTTATTTAATTTTTGGATTAAATATTTTCTATGAAAATTAAAAAAGAAAAAGTTAAAAGGCAAATATTTTCTACTTTTTTTTATTATTTATTCTATGAAAATTCAATAATAAAAAAGCATCTATATTTGCTTTTGGTATGGTTCACATTTTTATTTATTTGACAAAAATCTAACTAAATTATCATTCATTTTGACCTAATATTGCAAATATAAATTTATTTTTTGCATCTTAACTACTCTTTGGCATTTATAATATCATTGTTCCACACCTCAATTTTTTTATTGTTGTCAAAAATAAACCTAATCCAAAATGAATTAGCAAATTAGGGAATAAATGTAATCATTGTTTTTGGGAGTTTGAGTTCGACCGTGATTATTGTTGAATAATTTTATTTGGGATGCAAGTTTTCACTTAGACATGGACATTTTGCTATTTTAGCAATTTAAATTTAAAATTTTCTTTTATCAAAAGTAAAACTCTTGTTTTAATGTTTTTCTGGCCATCCCTTTTAAATACAACTAATGACAAATGAATATAACAATTAAGAAATTCGTAGATATATAACAACATTTTAAACTAATTGCTGCAGTTATTTTAAATCACATATGTCATTCGCTTATAAGACATAAGAGTCTATTAACGATATAAATCTATCACAAATATATTTTGCTACATTTACAATTTTTAAAAGATATTGTTATATACTTAATTATTATTCATAAAATTGCTAATCCATTATACTTACCCTAAGTTAAATGAATAATGTCAAAATTAAGTTTACTACGAAGGTAATTTGTGTGACCCTTTTATCCTAATGTAGGAAGTTTGTTCCACTCCATACCATTATTGAACTAAGAAGATTAAGTGTGTATTAGTATGTTTAAACAAGTATAATTATAGCAAATTCTATGAGTGATATATTTATATTAGCAATACAATATGTGTTACATATGCAAATATTTTGTATCTAATCGTTGTATTTGCAATTAACTCCATTAAAATATACAAATATAAACAGAACTCTTTAACCTGAGTTTAGCTAGGATCACAAACTACAAAAAGAAAGTATGGAATATGATCACACGGTTTTTGTTGATCAGTACAGCACCAACAGCATAATGCAAGGCATCGGATAAGTGAAACGAATCATGATTCGTCTGAAAATAAAATTGATCCCAACGGAGGTAGGGAAAGCCAACAGAAGACTGAATCTGATGGGAGAGGTCCCAAATTTTTTATCATTCTTCTAATGTTACCATTGTTAATTTACTTGTTGGTTTATATGCCATTTCCAGAGCCTGAATATTCTTTGCATAAAAATCAATCCTATAGTATTCCTATGGTTACAGAGAAACATGGCATGAAATTTTTTGTCAAATCATCAAATTTTGATGTAAGATATCCTCTTGGAAGCCCAGCTCGAGCTGAAATAGAGAACAGTGTGATAAGGGATTATCGAAACCTTCGCGTTATTGTGACGTAGAACTCGCGTTATTGTGACGTAGAACTCCAGAGACTCTAGTGGAATAAAAATCTCCCAACTCCTCACTGTGCAAAGCTGAATAATCTCGAGGTAGCATAAGGTGATAAAGGTAAATGTGGTTCTCTTTCTTTTCTTAGAAATGATATCCAGTTATCTTTTTGGAGATTAGTATCCATCTTCTGTTGCTTGTAACTTCACTTGTTAATTTTATAAACAATGCAAGTTTGTTATTTCTTGGTGGTCACAAAGTAATTAATTGCATAATTATTAATATATTACCCCCCAGCGTTATGTTGGATTAAAGTTTGAAAAGTATAGTAAATATTATATTGTGAAAACTCCCACATGCATTAAGAAAGGAGCCGTTGACAGTTTATGGAGATGGCAAGCAAACCCGGAGTTTTCAATACGTTTCTGATCTGGTAAAATATATACACATTTATTTATTACCACTACAAAATTAACGGACTGTTTCATCTTAATTTCGAATTTAGCAAATGTGATTTTTAAAGATAGGATATTATATAACTTTGTAATTAATTTATTATTGTGATATTGTTTAGAGTTTTACATAATAGTAATAATAATAAACTGTCACAGGTGGAGGGGCTAATGAAACTGATGGAAGGCGAGCACGTGGGGCCTTTTAATCTGGGCAACCCCGGCGAATTCACTATGCTCGAACTTGCTCAGGTCAGCTCTCTACTCCCCCATTCTCACATTTATACTCCTAAACTAATCTACTCTCTTTTAACATTTAAAATATTTAGGTTTAATCCTTTTTTTGGAACATTTACTCATCAACCCTAATTGCTTTGCCCTCTAAGTTTCTTTCACGTAAATAATTAACTTCATTCATGAAACATTTAAGTTGAGATAATTGGATGGTTAATTTGAATCTTATGAAAAAATAAACTCTAACAAAATCATAAAATTAAAATGAATATAGGTATGTATATTATTTTTTTGTAAGTAAAAAAAATATGATTTTAAAATTAATAATAAGTTTGTATTGGTGGGAGCTATTTTAGCATTTTAAGTAAATTGACCAACCAATTCAAACTATTGATATTGGTTTTAGTTATGTTACAAACACTTATTTTCAAATAGAGGATAATGAATTAAAATATTTATAAAATATAACAAAATTTTACATCAATAGATAAACACTAATAGGTTTTCTTTCCATAACAATGTTTTAAACTTTTCTTGTCTCGTAGGTTTTTTCAATAAAATATTTTGTTTTGTACAACCAAAACTGAATTCATGGAGAAGCAAAACTAATTTTAAGAATAGTCGACTTAGTTATTATCTATAGATCAAAACACTTTATAAGGTTGCGTTTCTTTATTTTCTAACAAGTTAAACTATAGACTTAAATTGTGATAAAAAAGGACATCCTAATAATTTATATGATACAGTCTATTTTAAATATAGATCCTTAATTCTATTTTATGAAGCTACCCAAATGGTTCCATATCAACAAAATAATTGTTATATATGTGTTCGCTTTTGTGCAGGTAGTGCAAGAGACAATAGATCCAAATGCAAAGATAGAGTTCAGACCGAACACGGAAGATGACCCGCATAAAAGAAAACCTGACATTTCTAAAGCTAAGGACCTTCTTGGTTGGGAGCCCACCGTGTCCCTTCGAAAGGGCCTTCCCTTATGGTTTCGGACTTTCGTCAACGCATCTTCGGTGACTCGAAAGATGACATTTCCACTGCTGCCGTCCTCTCCACCACCACCACGGTCTAGTCCCTCCTTCTTATCTCTTCTCATACCTTTTAGAATAAGAGATCTCTCAAATCACTTCCTCCCAAAGAATAACATTTGGTAG

mRNA sequence

ATGGGAGATGAGAGGCAGATACAGCACCAACAGCATAATGCAAGGCATCGGATAAGTGAAACGAATCATGATTCGTCTGAAAATAAAATTGATCCCAACGGAGGTAGGGAAAGCCAACAGAAGACTGAATCTGATGGGAGAGAGCCTGAATATTCTTTGCATAAAAATCAATCCTATAGTATTCCTATGGTTACAGAGAAACATGGCATGAAATTTTTTGTCAAATCATCAAATTTTGATGTAAGATATCCTCTTGGAAGCCCAGCTCGAGCTGAAATAGAGAACAGTGTGATAAGGGATTATCGAAACCTTCGCGTTATTGTGACAAAGGAGCCGTTGACAGTTTATGGAGATGGCAAGCAAACCCGGAGTTTTCAATACGTTTCTGATCTGGTGGAGGGGCTAATGAAACTGATGGAAGGCGAGCACGTGGGGCCTTTTAATCTGGGCAACCCCGGCGAATTCACTATGCTCGAACTTGCTCAGGTAGTGCAAGAGACAATAGATCCAAATGCAAAGATAGAGTTCAGACCGAACACGGAAGATGACCCGCATAAAAGAAAACCTGACATTTCTAAAGCTAAGGACCTTCTTGGTTGGGAGCCCACCGTGTCCCTTCGAAAGGGCCTTCCCTTATGGTTTCGGACTTTCGTCAACGCATCTTCGGTGACTCGAAAGATGACATTTCCACTGCTGCCGTCCTCTCCACCACCACCACGGTCTAGTCCCTCCTTCTTATCTCTTCTCATACCTTTTAGAATAAGAGATCTCTCAAATCACTTCCTCCCAAAGAATAACATTTGGTAG

Coding sequence (CDS)

ATGGGAGATGAGAGGCAGATACAGCACCAACAGCATAATGCAAGGCATCGGATAAGTGAAACGAATCATGATTCGTCTGAAAATAAAATTGATCCCAACGGAGGTAGGGAAAGCCAACAGAAGACTGAATCTGATGGGAGAGAGCCTGAATATTCTTTGCATAAAAATCAATCCTATAGTATTCCTATGGTTACAGAGAAACATGGCATGAAATTTTTTGTCAAATCATCAAATTTTGATGTAAGATATCCTCTTGGAAGCCCAGCTCGAGCTGAAATAGAGAACAGTGTGATAAGGGATTATCGAAACCTTCGCGTTATTGTGACAAAGGAGCCGTTGACAGTTTATGGAGATGGCAAGCAAACCCGGAGTTTTCAATACGTTTCTGATCTGGTGGAGGGGCTAATGAAACTGATGGAAGGCGAGCACGTGGGGCCTTTTAATCTGGGCAACCCCGGCGAATTCACTATGCTCGAACTTGCTCAGGTAGTGCAAGAGACAATAGATCCAAATGCAAAGATAGAGTTCAGACCGAACACGGAAGATGACCCGCATAAAAGAAAACCTGACATTTCTAAAGCTAAGGACCTTCTTGGTTGGGAGCCCACCGTGTCCCTTCGAAAGGGCCTTCCCTTATGGTTTCGGACTTTCGTCAACGCATCTTCGGTGACTCGAAAGATGACATTTCCACTGCTGCCGTCCTCTCCACCACCACCACGGTCTAGTCCCTCCTTCTTATCTCTTCTCATACCTTTTAGAATAAGAGATCTCTCAAATCACTTCCTCCCAAAGAATAACATTTGGTAG

Protein sequence

MGDERQIQHQQHNARHRISETNHDSSENKIDPNGGRESQQKTESDGREPEYSLHKNQSYSIPMVTEKHGMKFFVKSSNFDVRYPLGSPARAEIENSVIRDYRNLRVIVTKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTFVNASSVTRKMTFPLLPSSPPPPRSSPSFLSLLIPFRIRDLSNHFLPKNNIW*

Homology

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BLAST of CsaV3_6G024100 vs. NCBI nr
Match: KAE8647114.1 (hypothetical protein Csa_021705 [Cucumis sativus])

HSP 1 Score: 542.0 bits (1395), Expect = 3.0e-150
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0


Query: 1   MGDERQIQHQQHNARHRISETNHDSSENKIDPNGGRESQQKTESDGREPEYSLHKNQSYS 60
           MGDERQIQHQQHNARHRISETNHDSSENKIDPNGGRESQQKTESDGREPEYSLHKNQSYS
Sbjct: 1   MGDERQIQHQQHNARHRISETNHDSSENKIDPNGGRESQQKTESDGREPEYSLHKNQSYS 60

Query: 61  IPMVTEKHGMKFFVKSSNFDVRYPLGSPARAEIENSVIRDYRNLRVIVTKEPLTVYGDGK 120
           IPMVTEKHGMKFFVKSSNFDVRYPLGSPARAEIENSVIRDYRNLRVIVTKEPLTVYGDGK
Sbjct: 61  IPMVTEKHGMKFFVKSSNFDVRYPLGSPARAEIENSVIRDYRNLRVIVTKEPLTVYGDGK 120

Query: 121 QTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNT 180
           QTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNT
Sbjct: 121 QTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNT 180

Query: 181 EDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTFVNASSVTRKMTFPLLPSSPPPPR 240
           EDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTFVNASSVTRKMTFPLLPSSPPPPR
Sbjct: 181 EDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTFVNASSVTRKMTFPLLPSSPPPPR 240

Query: 241 SSPSFLSLLIPFRIRDLSNHFLPKNNIW 269
           SSPSFLSLLIPFRIRDLSNHFLPKNNIW
Sbjct: 241 SSPSFLSLLIPFRIRDLSNHFLPKNNIW 268

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BLAST of CsaV3_6G024100 vs. NCBI nr
Match: KAE8647100.1 (hypothetical protein Csa_021733 [Cucumis sativus])

HSP 1 Score: 330.9 bits (847), Expect = 1.0e-86
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 110 KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID 169
           KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID
Sbjct: 99  KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID 158

Query: 170 PNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTFVNASSVTRKMTF 229
           PNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTFVNASSVTRKMTF
Sbjct: 159 PNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTFVNASSVTRKMTF 218

Query: 230 PLLPSSPPPPRSSPSFLSLLIPFRIRDLSNHFLPKNNIW 269
           PLLPSSPPPPRSSPSFLSLLIPFRIRDLSNHFLPKNNIW
Sbjct: 219 PLLPSSPPPPRSSPSFLSLLIPFRIRDLSNHFLPKNNIW 257

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BLAST of CsaV3_6G024100 vs. NCBI nr
Match: KAE8637389.1 (hypothetical protein CSA_018332 [Cucumis sativus])

HSP 1 Score: 284.6 bits (727), Expect = 8.6e-73
Identity = 147/194 (75.77%), Postives = 153/194 (78.87%), Query Frame = 0


Query: 48  EPEYSLHKNQSYSIPMVTEKHGMKFFVKSSNFDVRYPLGSPARAEIENSVIRDYRNL--- 107
           EPEYSLHKNQSYSIPMVTEKHG++FFVKSSNFDVRYPLGSPARAEIENSVIRDYRNL   
Sbjct: 5   EPEYSLHKNQSYSIPMVTEKHGVEFFVKSSNFDVRYPLGSPARAEIENSVIRDYRNLVSH 64

Query: 108 --------------RVIVTKEPLTVYGDG-------KQTRSFQYVSDLVEGLMKLMEGEH 167
                         +  + K P  +           +   SFQYVSDLVEGLMKLMEGEH
Sbjct: 65  YCDRYVGLKFEKYSKYYIVKTPTGIKKGAVDSLWRWQANPSFQYVSDLVEGLMKLMEGEH 124

Query: 168 VGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPT 218
           VGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPT
Sbjct: 125 VGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPT 184

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BLAST of CsaV3_6G024100 vs. NCBI nr
Match: XP_031745338.1 (UDP-glucuronic acid decarboxylase 2-like [Cucumis sativus])

HSP 1 Score: 241.9 bits (616), Expect = 6.4e-60
Identity = 123/155 (79.35%), Postives = 128/155 (82.58%), Query Frame = 0


Query: 63  MVTEKHGMKFFVKSSNFDVRYPLGSPARAEIENSVIRDYRNLRVIVTKEPLTVYGDGKQT 122
           MVTEKHG++FFVKSSNFDVRYPLGSPARAEIENS           + K  +      +  
Sbjct: 1   MVTEKHGVEFFVKSSNFDVRYPLGSPARAEIENS-----------IKKGAVDSLWRWQAN 60

Query: 123 RSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTED 182
            SFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTED
Sbjct: 61  PSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDPNAKIEFRPNTED 120

Query: 183 DPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTF 218
           DPHKRKPDISKAKDLLGWEPTVSLRKGLPL    F
Sbjct: 121 DPHKRKPDISKAKDLLGWEPTVSLRKGLPLMVSDF 144

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BLAST of CsaV3_6G024100 vs. NCBI nr
Match: XP_038875623.1 (UDP-glucuronic acid decarboxylase 2-like [Benincasa hispida])

HSP 1 Score: 216.5 bits (550), Expect = 2.9e-52
Identity = 104/108 (96.30%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 110 KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID 169
           KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID
Sbjct: 321 KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID 380

Query: 170 PNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTF 218
           PNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPL    F
Sbjct: 381 PNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLMVSDF 428

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BLAST of CsaV3_6G024100 vs. ExPASy Swiss-Prot
Match: Q8S8T4 (UDP-glucuronic acid decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=UXS4 PE=2 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 6.6e-52
Identity = 96/108 (88.89%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 110 KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID 169
           KEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA+VVQETID
Sbjct: 316 KEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETID 375

Query: 170 PNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTF 218
           PNAKIEFRPNTEDDPHKRKPDI+KAK+LLGWEP V+LR+GLPL  + F
Sbjct: 376 PNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVALRQGLPLMVKDF 423

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BLAST of CsaV3_6G024100 vs. ExPASy Swiss-Prot
Match: Q9LZI2 (UDP-glucuronic acid decarboxylase 2 OS=Arabidopsis thaliana OX=3702 GN=UXS2 PE=1 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.1e-51
Identity = 96/108 (88.89%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 110 KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID 169
           KEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA+VVQETID
Sbjct: 314 KEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETID 373

Query: 170 PNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTF 218
           PNA IEFRPNTEDDPHKRKPDI+KAK+LLGWEP VSLR+GLPL  + F
Sbjct: 374 PNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDF 421

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BLAST of CsaV3_6G024100 vs. ExPASy Swiss-Prot
Match: Q8VZC0 (UDP-glucuronic acid decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=UXS1 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.7e-45
Identity = 85/112 (75.89%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 108 VTKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQET 167
           + K P+TVYGDGKQTRSFQYVSDLVEGL+ LME +HVGPFNLGNPGEFTMLELA+VV+E 
Sbjct: 313 IRKHPMTVYGDGKQTRSFQYVSDLVEGLVALMENDHVGPFNLGNPGEFTMLELAEVVKEV 372

Query: 168 IDPNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTFVN 220
           IDP+A IEF+PNT DDPHKRKPDISKAK+ L WEP +SLR+GLP     F N
Sbjct: 373 IDPSATIEFKPNTADDPHKRKPDISKAKEQLNWEPKISLREGLPRMVSDFRN 424

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BLAST of CsaV3_6G024100 vs. ExPASy Swiss-Prot
Match: Q9ZV36 (UDP-glucuronic acid decarboxylase 6 OS=Arabidopsis thaliana OX=3702 GN=UXS6 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 4.8e-34
Identity = 71/116 (61.21%), Postives = 86/116 (74.14%), Query Frame = 0


Query: 111 EPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDP 170
           E LTV   G QTRSF YVSD+VEGLM+LMEG+  GP N+GNPGEFTM+ELA+ V+E I P
Sbjct: 228 EALTVQKPGTQTRSFCYVSDMVEGLMRLMEGDQTGPINIGNPGEFTMVELAETVKELIKP 287

Query: 171 NAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTFVNASSVTRK 227
           + +I+   NT DDP +RKPDISKAK++LGWEP V LR+GLPL    F     V +K
Sbjct: 288 DVEIKMVENTPDDPRQRKPDISKAKEVLGWEPKVKLREGLPLMEEDFRLRLGVPKK 343

[Close]

BLAST of CsaV3_6G024100 vs. ExPASy Swiss-Prot
Match: Q9SN95 (UDP-glucuronic acid decarboxylase 5 OS=Arabidopsis thaliana OX=3702 GN=UXS5 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 4.1e-33
Identity = 67/107 (62.62%), Postives = 84/107 (78.50%), Query Frame = 0


Query: 111 EPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETIDP 170
           E LTV   G QTRSF YVSD+V+GLM+LMEG+  GP N+GNPGEFTM+ELA+ V+E I+P
Sbjct: 226 EALTVQKPGTQTRSFCYVSDMVDGLMRLMEGDDTGPINIGNPGEFTMVELAETVKELINP 285

Query: 171 NAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTF 218
           + +I+   NT DDP +RKPDI+KAK++LGWEP V LR+GLPL    F
Sbjct: 286 SIEIKMVENTPDDPRQRKPDITKAKEVLGWEPKVKLREGLPLMEEDF 332

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BLAST of CsaV3_6G024100 vs. ExPASy TrEMBL
Match: A0A1S3C7Y3 (UDP-glucuronate decarboxylase OS=Cucumis melo OX=3656 GN=LOC103497844 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 3.1e-52
Identity = 103/108 (95.37%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 110 KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID 169
           KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID
Sbjct: 316 KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID 375

Query: 170 PNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTF 218
           PNA+IEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPL    F
Sbjct: 376 PNARIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLMVSDF 423

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BLAST of CsaV3_6G024100 vs. ExPASy TrEMBL
Match: A0A4Y1S172 (UDP-glucuronate decarboxylase OS=Prunus dulcis OX=3755 GN=Prudu_023231 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 1.5e-51
Identity = 104/137 (75.91%), Postives = 114/137 (83.21%), Query Frame = 0


Query: 110 KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID 169
           KEP+TVYGDGKQTRSFQYVSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA+VVQETID
Sbjct: 35  KEPMTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETID 94

Query: 170 PNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTFVNASSVTRKMTF 229
           P+AKIE+RPNTEDDPHKRKPDI+KAKDLLGW+P VSL+KGLPL    F        K   
Sbjct: 95  PDAKIEYRPNTEDDPHKRKPDITKAKDLLGWQPKVSLQKGLPLMVSDFRKRIFGDHKEAG 154

Query: 230 PLLPSSPPPPRSSPSFL 247
                 PPPP ++PSFL
Sbjct: 155 STTTPPPPPPCNNPSFL 171

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BLAST of CsaV3_6G024100 vs. ExPASy TrEMBL
Match: A0A6V7PR07 (UDP-glucuronate decarboxylase OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS16500 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.0e-51
Identity = 102/130 (78.46%), Postives = 113/130 (86.92%), Query Frame = 0


Query: 110 KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID 169
           KEPLTVYGDGKQTRSFQYVSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA+VVQ+TID
Sbjct: 171 KEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQDTID 230

Query: 170 PNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTFVNASSVTRKMTF 229
           PNA+IEFR NTEDDPHKRKPDI++AK+LLGWEP +SLR+GLP W  T  +ASS T     
Sbjct: 231 PNARIEFRANTEDDPHKRKPDITRAKELLGWEPKISLRQGLPSWSPTSASASSAT----- 290

Query: 230 PLLPSSPPPP 240
              P+ PPPP
Sbjct: 291 --TPTPPPPP 293

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BLAST of CsaV3_6G024100 vs. ExPASy TrEMBL
Match: A0A6J1L4B9 (UDP-glucuronate decarboxylase OS=Cucurbita maxima OX=3661 GN=LOC111499022 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 2.6e-51
Identity = 101/108 (93.52%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 110 KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID 169
           KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID
Sbjct: 321 KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID 380

Query: 170 PNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTF 218
           PNA+IEFRPNTEDDPHKRKPDISKAK+LLGWEP+VSLRKGLPL    F
Sbjct: 381 PNARIEFRPNTEDDPHKRKPDISKAKELLGWEPSVSLRKGLPLMVSDF 428

[Close]

BLAST of CsaV3_6G024100 vs. ExPASy TrEMBL
Match: A0A6J1H7L0 (UDP-glucuronate decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111460303 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 2.6e-51
Identity = 101/108 (93.52%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 110 KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID 169
           KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID
Sbjct: 321 KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID 380

Query: 170 PNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTF 218
           PNA+IEFRPNTEDDPHKRKPDISKAK+LLGWEP+VSLRKGLPL    F
Sbjct: 381 PNARIEFRPNTEDDPHKRKPDISKAKELLGWEPSVSLRKGLPLMVSDF 428

[Close]

BLAST of CsaV3_6G024100 vs. TAIR 10
Match: AT2G47650.1 (UDP-xylose synthase 4 )

HSP 1 Score: 205.7 bits (522), Expect = 4.7e-53
Identity = 96/108 (88.89%), Postives = 104/108 (96.30%), Query Frame = 0


Query: 110 KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID 169
           KEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA+VVQETID
Sbjct: 316 KEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETID 375

Query: 170 PNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTF 218
           PNAKIEFRPNTEDDPHKRKPDI+KAK+LLGWEP V+LR+GLPL  + F
Sbjct: 376 PNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVALRQGLPLMVKDF 423

[Close]

BLAST of CsaV3_6G024100 vs. TAIR 10
Match: AT3G62830.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 204.9 bits (520), Expect = 8.1e-53
Identity = 96/108 (88.89%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 110 KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID 169
           KEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA+VVQETID
Sbjct: 314 KEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETID 373

Query: 170 PNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTF 218
           PNA IEFRPNTEDDPHKRKPDI+KAK+LLGWEP VSLR+GLPL  + F
Sbjct: 374 PNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDF 421

[Close]

BLAST of CsaV3_6G024100 vs. TAIR 10
Match: AT3G62830.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 204.9 bits (520), Expect = 8.1e-53
Identity = 96/108 (88.89%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 110 KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQETID 169
           KEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA+VVQETID
Sbjct: 314 KEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETID 373

Query: 170 PNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTF 218
           PNA IEFRPNTEDDPHKRKPDI+KAK+LLGWEP VSLR+GLPL  + F
Sbjct: 374 PNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSLRQGLPLMVKDF 421

[Close]

BLAST of CsaV3_6G024100 vs. TAIR 10
Match: AT2G47650.2 (UDP-xylose synthase 4 )

HSP 1 Score: 200.7 bits (509), Expect = 1.5e-51
Identity = 97/114 (85.09%), Postives = 104/114 (91.23%), Query Frame = 0


Query: 110 KEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELA------QV 169
           KEPLTVYGDGKQTRSFQ+VSDLVEGLM+LMEGEHVGPFNLGNPGEFTMLELA      QV
Sbjct: 316 KEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKWMVGEQV 375

Query: 170 VQETIDPNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTF 218
           VQETIDPNAKIEFRPNTEDDPHKRKPDI+KAK+LLGWEP V+LR+GLPL  + F
Sbjct: 376 VQETIDPNAKIEFRPNTEDDPHKRKPDITKAKELLGWEPKVALRQGLPLMVKDF 429

[Close]

BLAST of CsaV3_6G024100 vs. TAIR 10
Match: AT3G53520.1 (UDP-glucuronic acid decarboxylase 1 )

HSP 1 Score: 183.7 bits (465), Expect = 1.9e-46
Identity = 85/112 (75.89%), Postives = 96/112 (85.71%), Query Frame = 0


Query: 108 VTKEPLTVYGDGKQTRSFQYVSDLVEGLMKLMEGEHVGPFNLGNPGEFTMLELAQVVQET 167
           + K P+TVYGDGKQTRSFQYVSDLVEGL+ LME +HVGPFNLGNPGEFTMLELA+VV+E 
Sbjct: 313 IRKHPMTVYGDGKQTRSFQYVSDLVEGLVALMENDHVGPFNLGNPGEFTMLELAEVVKEV 372

Query: 168 IDPNAKIEFRPNTEDDPHKRKPDISKAKDLLGWEPTVSLRKGLPLWFRTFVN 220
           IDP+A IEF+PNT DDPHKRKPDISKAK+ L WEP +SLR+GLP     F N
Sbjct: 373 IDPSATIEFKPNTADDPHKRKPDISKAKEQLNWEPKISLREGLPRMVSDFRN 424

The following BLAST results are available for this feature:

BLAST of CsaV3_6G024100 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8647114.1	3.0e-150	100.00	hypothetical protein Csa_021705 [Cucumis sativus]	[more]
KAE8647100.1	1.0e-86	100.00	hypothetical protein Csa_021733 [Cucumis sativus]	[more]
KAE8637389.1	8.6e-73	75.77	hypothetical protein CSA_018332 [Cucumis sativus]	[more]
XP_031745338.1	6.4e-60	79.35	UDP-glucuronic acid decarboxylase 2-like [Cucumis sativus]	[more]
XP_038875623.1	2.9e-52	96.30	UDP-glucuronic acid decarboxylase 2-like [Benincasa hispida]	[more]

BLAST of CsaV3_6G024100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8T4	6.6e-52	88.89	UDP-glucuronic acid decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=UXS4 PE=2...	[more]
Q9LZI2	1.1e-51	88.89	UDP-glucuronic acid decarboxylase 2 OS=Arabidopsis thaliana OX=3702 GN=UXS2 PE=1...	[more]
Q8VZC0	2.7e-45	75.89	UDP-glucuronic acid decarboxylase 1 OS=Arabidopsis thaliana OX=3702 GN=UXS1 PE=1...	[more]
Q9ZV36	4.8e-34	61.21	UDP-glucuronic acid decarboxylase 6 OS=Arabidopsis thaliana OX=3702 GN=UXS6 PE=2...	[more]
Q9SN95	4.1e-33	62.62	UDP-glucuronic acid decarboxylase 5 OS=Arabidopsis thaliana OX=3702 GN=UXS5 PE=2...	[more]

BLAST of CsaV3_6G024100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C7Y3	3.1e-52	95.37	UDP-glucuronate decarboxylase OS=Cucumis melo OX=3656 GN=LOC103497844 PE=3 SV=1	[more]
A0A4Y1S172	1.5e-51	75.91	UDP-glucuronate decarboxylase OS=Prunus dulcis OX=3755 GN=Prudu_023231 PE=3 SV=1	[more]
A0A6V7PR07	2.0e-51	78.46	UDP-glucuronate decarboxylase OS=Ananas comosus var. bracteatus OX=296719 GN=CB5...	[more]
A0A6J1L4B9	2.6e-51	93.52	UDP-glucuronate decarboxylase OS=Cucurbita maxima OX=3661 GN=LOC111499022 PE=3 S...	[more]
A0A6J1H7L0	2.6e-51	93.52	UDP-glucuronate decarboxylase OS=Cucurbita moschata OX=3662 GN=LOC111460303 PE=3...	[more]

BLAST of CsaV3_6G024100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47650.1	4.7e-53	88.89	UDP-xylose synthase 4	[more]
AT3G62830.1	8.1e-53	88.89	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G62830.2	8.1e-53	88.89	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G47650.2	1.5e-51	85.09	UDP-xylose synthase 4	[more]
AT3G53520.1	1.9e-46	75.89	UDP-glucuronic acid decarboxylase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015399	Domain of unknown function DUF1977, DnaJ-like	PFAM	PF09320	DUF1977	coord: 47..102 e-value: 3.1E-5 score: 24.1
None	No IPR available	GENE3D	3.40.50.720		coord: 84..221 e-value: 3.4E-36 score: 127.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..54
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52
None	No IPR available	PANTHER	PTHR43078:SF16	UDP-GLUCURONATE DECARBOXYLASE-RELATED	coord: 108..217
IPR016040	NAD(P)-binding domain	PFAM	PF16363	GDP_Man_Dehyd	coord: 105..210 e-value: 1.6E-12 score: 47.5
IPR044516	UDP-glucuronic acid decarboxylase	PANTHER	PTHR43078	UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED	coord: 108..217
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 104..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G024100.1	CsaV3_6G024100.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042732	D-xylose metabolic process
molecular_function	GO:0070403	NAD+ binding
molecular_function	GO:0048040	UDP-glucuronate decarboxylase activity