CsaV3_6G023990 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGGGCTGGGCCACCTCGAATGGCGTGAGCCGCATGCGGGGAGACCCGCACGTACGGTTTTTAGGGGGATCTGGTCGAAAGACCGGCGCCCACCCGACTAGAGGGACTGAGAAATTAATAGAGTACAAAACTTATCTTCAAGCTTTACCTTATTCTGATCGTTCAGAGGGCGATCGCGGAGTCACTGAATGA ATGCTGGGCTGGGCCACCTCGAATGGCGTGAGCCGCATGCGGGGAGACCCGCACGTACGGTTTTTAGGGGGATCTGGTCGAAAGACCGGCGCCCACCCGACTAGAGGGACTGAGAAATTAATAGAGTACAAAACTTATCTTCAAGCTTTACCTTATTCTGATCGTTCAGAGGGCGATCGCGGAGTCACTGAATGA ATGCTGGGCTGGGCCACCTCGAATGGCGTGAGCCGCATGCGGGGAGACCCGCACGTACGGTTTTTAGGGGGATCTGGTCGAAAGACCGGCGCCCACCCGACTAGAGGGACTGAGAAATTAATAGAGTACAAAACTTATCTTCAAGCTTTACCTTATTCTGATCGTTCAGAGGGCGATCGCGGAGTCACTGAATGA MLGWATSNGVSRMRGDPHVRFLGGSGRKTGAHPTRGTEKLIEYKTYLQALPYSDRSEGDRGVTE* Homology
BLAST of CsaV3_6G023990 vs. NCBI nr
Match: KAE8647103.1 (hypothetical protein Csa_021706 [Cucumis sativus] >KAE8647119.1 hypothetical protein Csa_021741 [Cucumis sativus] >KAE8647130.1 hypothetical protein Csa_021543 [Cucumis sativus]) HSP 1 Score: 138.3 bits (347), Expect = 2.4e-29 Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0
BLAST of CsaV3_6G023990 vs. NCBI nr
Match: GFQ01817.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 [Phtheirospermum japonicum]) HSP 1 Score: 127.9 bits (320), Expect = 3.2e-26 Identity = 62/65 (95.38%), Postives = 62/65 (95.38%), Query Frame = 0
BLAST of CsaV3_6G023990 vs. NCBI nr
Match: AZP40280.1 (NADH dehydrogenase subunit 7 [Cucumis melo var. momordica]) HSP 1 Score: 107.8 bits (268), Expect = 3.5e-20 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of CsaV3_6G023990 vs. NCBI nr
Match: KAG4199295.1 (hypothetical protein ERO13_A05G138400v2 [Gossypium hirsutum]) HSP 1 Score: 78.2 bits (191), Expect = 2.9e-11 Identity = 41/60 (68.33%), Postives = 45/60 (75.00%), Query Frame = 0
BLAST of CsaV3_6G023990 vs. NCBI nr
Match: TYH16843.1 (hypothetical protein ES288_A05G147500v1 [Gossypium darwinii]) HSP 1 Score: 76.6 bits (187), Expect = 8.6e-11 Identity = 40/60 (66.67%), Postives = 45/60 (75.00%), Query Frame = 0
BLAST of CsaV3_6G023990 vs. ExPASy Swiss-Prot
Match: Q36450 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris OX=4096 GN=NAD7 PE=2 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 4.6e-07 Identity = 29/50 (58.00%), Postives = 31/50 (62.00%), Query Frame = 0
BLAST of CsaV3_6G023990 vs. ExPASy Swiss-Prot
Match: P93306 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Arabidopsis thaliana OX=3702 GN=NAD7 PE=1 SV=2) HSP 1 Score: 50.8 bits (120), Expect = 6.6e-06 Identity = 27/50 (54.00%), Postives = 30/50 (60.00%), Query Frame = 0
BLAST of CsaV3_6G023990 vs. ExPASy Swiss-Prot
Match: Q37619 (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Prototheca wickerhamii OX=3111 GN=NAD7 PE=3 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 2.5e-05 Identity = 26/48 (54.17%), Postives = 27/48 (56.25%), Query Frame = 0
BLAST of CsaV3_6G023990 vs. ExPASy Swiss-Prot
Match: Q2RU37 (NADH-quinone oxidoreductase subunit D OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=nuoD PE=3 SV=1) HSP 1 Score: 48.9 bits (115), Expect = 2.5e-05 Identity = 25/42 (59.52%), Postives = 26/42 (61.90%), Query Frame = 0
BLAST of CsaV3_6G023990 vs. ExPASy Swiss-Prot
Match: Q9TC96 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nephroselmis olivacea OX=31312 GN=NAD7 PE=3 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 3.3e-05 Identity = 26/48 (54.17%), Postives = 27/48 (56.25%), Query Frame = 0
BLAST of CsaV3_6G023990 vs. ExPASy TrEMBL
Match: A0A3Q7EEY5 (Uncharacterized protein OS=Solanum lycopersicum OX=4081 PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 8.1e-23 Identity = 57/65 (87.69%), Postives = 57/65 (87.69%), Query Frame = 0
BLAST of CsaV3_6G023990 vs. ExPASy TrEMBL
Match: A0A3S9JIE4 (NADH dehydrogenase subunit 7 OS=Cucumis melo var. momordica OX=2034244 GN=nad7 PE=3 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.7e-20 Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
BLAST of CsaV3_6G023990 vs. ExPASy TrEMBL
Match: A0A4D8YFM0 (Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_047296 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 9.9e-13 Identity = 41/59 (69.49%), Postives = 44/59 (74.58%), Query Frame = 0
BLAST of CsaV3_6G023990 vs. ExPASy TrEMBL
Match: A0A0E0DVR6 (Uncharacterized protein OS=Oryza meridionalis OX=40149 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 3.2e-11 Identity = 35/38 (92.11%), Postives = 35/38 (92.11%), Query Frame = 0
BLAST of CsaV3_6G023990 vs. ExPASy TrEMBL
Match: A0A5D2GG31 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_A05G147500v1 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 4.2e-11 Identity = 40/60 (66.67%), Postives = 45/60 (75.00%), Query Frame = 0
BLAST of CsaV3_6G023990 vs. TAIR 10
Match: ATMG00510.1 (NADH dehydrogenase subunit 7 ) HSP 1 Score: 52.4 bits (124), Expect = 1.6e-07 Identity = 28/50 (56.00%), Postives = 31/50 (62.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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