CsaV3_6G023850 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G023850
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionRING-type domain-containing protein
Locationchr6: 15832718 .. 15833452 (-)
RNA-Seq ExpressionCsaV3_6G023850
SyntenyCsaV3_6G023850
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGACGACGACGACGATGCCTCCCTCTTATATCCGCCCTCCTACACACGTTACGCTCTCAGCGGCAAAATCATGCTCGGCGCAATCATTTTATTATTATTTGTCGTCATCCTCATGATTTGTCTTCATCTCTACGTTCGATTGTTCCTACTCTCCTCCACCCCCCGCCCATCTCGTATCCGCCGCCGTCGCCGCCGTCAACACTTTGTTTTCACTGCCGAGCCTCGAATCGCCGCCGCTGGTGTTCCGTCGCGTGGTTTGCCGCAGTCGATTCTCAAGTCCCTACCCGTTTTCGTTCACTCGGAGAAAACCGACCCGGATCCGATTTACTGTGCGGTTTGTTTATCGGAATTTGAAGAGAACGAAATCGGACGGAGTATTCCGAAATGCAACCATAGCTTCCACGTGGGGTGTATTGATATGTGGTTTTATTCCCACGCGACTTGCCCGCTTTGTAGATCTGAGGTGAAACCCGAACCCGAATGTGAGTCCGGCCCGCATGATGACCCGGGGGAGATTGCCATTGATGTCTGTGAACTGGGTTCGAGATCTGGTGAGGAAGAAACGGATCATCGGTGTCCGGTTGAGATGGCGGCGTCGGTGGAGGTGGTGGATGATGAGTCGAGGCATGTGAACGACATGTCGGATGATGGGACGTCGAGGGCAACGGTGAATTTTGTGAAGTCGTTGTCCGTTAAGGAGGAAATAGAAGCAGTCGGTTCAGAAAGATAA

mRNA sequence

ATGGCCGACGACGACGACGATGCCTCCCTCTTATATCCGCCCTCCTACACACGTTACGCTCTCAGCGGCAAAATCATGCTCGGCGCAATCATTTTATTATTATTTGTCGTCATCCTCATGATTTGTCTTCATCTCTACGTTCGATTGTTCCTACTCTCCTCCACCCCCCGCCCATCTCGTATCCGCCGCCGTCGCCGCCGTCAACACTTTGTTTTCACTGCCGAGCCTCGAATCGCCGCCGCTGGTGTTCCGTCGCGTGGTTTGCCGCAGTCGATTCTCAAGTCCCTACCCGTTTTCGTTCACTCGGAGAAAACCGACCCGGATCCGATTTACTGTGCGGTTTGTTTATCGGAATTTGAAGAGAACGAAATCGGACGGAGTATTCCGAAATGCAACCATAGCTTCCACGTGGGGTGTATTGATATGTGGTTTTATTCCCACGCGACTTGCCCGCTTTGTAGATCTGAGGTGAAACCCGAACCCGAATGTGAGTCCGGCCCGCATGATGACCCGGGGGAGATTGCCATTGATGTCTGTGAACTGGGTTCGAGATCTGGTGAGGAAGAAACGGATCATCGGTGTCCGGTTGAGATGGCGGCGTCGGTGGAGGTGGTGGATGATGAGTCGAGGCATGTGAACGACATGTCGGATGATGGGACGTCGAGGGCAACGGTGAATTTTGTGAAGTCGTTGTCCGTTAAGGAGGAAATAGAAGCAGTCGGTTCAGAAAGATAA

Coding sequence (CDS)

ATGGCCGACGACGACGACGATGCCTCCCTCTTATATCCGCCCTCCTACACACGTTACGCTCTCAGCGGCAAAATCATGCTCGGCGCAATCATTTTATTATTATTTGTCGTCATCCTCATGATTTGTCTTCATCTCTACGTTCGATTGTTCCTACTCTCCTCCACCCCCCGCCCATCTCGTATCCGCCGCCGTCGCCGCCGTCAACACTTTGTTTTCACTGCCGAGCCTCGAATCGCCGCCGCTGGTGTTCCGTCGCGTGGTTTGCCGCAGTCGATTCTCAAGTCCCTACCCGTTTTCGTTCACTCGGAGAAAACCGACCCGGATCCGATTTACTGTGCGGTTTGTTTATCGGAATTTGAAGAGAACGAAATCGGACGGAGTATTCCGAAATGCAACCATAGCTTCCACGTGGGGTGTATTGATATGTGGTTTTATTCCCACGCGACTTGCCCGCTTTGTAGATCTGAGGTGAAACCCGAACCCGAATGTGAGTCCGGCCCGCATGATGACCCGGGGGAGATTGCCATTGATGTCTGTGAACTGGGTTCGAGATCTGGTGAGGAAGAAACGGATCATCGGTGTCCGGTTGAGATGGCGGCGTCGGTGGAGGTGGTGGATGATGAGTCGAGGCATGTGAACGACATGTCGGATGATGGGACGTCGAGGGCAACGGTGAATTTTGTGAAGTCGTTGTCCGTTAAGGAGGAAATAGAAGCAGTCGGTTCAGAAAGATAA

Protein sequence

MADDDDDASLLYPPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSRIRRRRRRQHFVFTAEPRIAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSEFEENEIGRSIPKCNHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAIDVCELGSRSGEEETDHRCPVEMAASVEVVDDESRHVNDMSDDGTSRATVNFVKSLSVKEEIEAVGSER*
Homology
BLAST of CsaV3_6G023850 vs. NCBI nr
Match: XP_004150504.1 (RING-H2 finger protein ATL2 [Cucumis sativus] >KGN47424.1 hypothetical protein Csa_021711 [Cucumis sativus])

HSP 1 Score: 490.0 bits (1260), Expect = 1.2e-134
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0

Query: 1   MADDDDDASLLYPPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSR 60
           MADDDDDASLLYPPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSR
Sbjct: 1   MADDDDDASLLYPPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSR 60

Query: 61  IRRRRRRQHFVFTAEPRIAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSEFE 120
           IRRRRRRQHFVFTAEPRIAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSEFE
Sbjct: 61  IRRRRRRQHFVFTAEPRIAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSEFE 120

Query: 121 ENEIGRSIPKCNHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAIDVCE 180
           ENEIGRSIPKCNHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAIDVCE
Sbjct: 121 ENEIGRSIPKCNHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAIDVCE 180

Query: 181 LGSRSGEEETDHRCPVEMAASVEVVDDESRHVNDMSDDGTSRATVNFVKSLSVKEEIEAV 240
           LGSRSGEEETDHRCPVEMAASVEVVDDESRHVNDMSDDGTSRATVNFVKSLSVKEEIEAV
Sbjct: 181 LGSRSGEEETDHRCPVEMAASVEVVDDESRHVNDMSDDGTSRATVNFVKSLSVKEEIEAV 240

Query: 241 GSER 245
           GSER
Sbjct: 241 GSER 244

BLAST of CsaV3_6G023850 vs. NCBI nr
Match: XP_008458410.1 (PREDICTED: RING-H2 finger protein ATL2-like [Cucumis melo])

HSP 1 Score: 417.5 bits (1072), Expect = 7.7e-113
Identity = 217/247 (87.85%), Postives = 222/247 (89.88%), Query Frame = 0

Query: 1   MADDDDDASLLYPPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSST---PR 60
           MADDDDD +L  PPSY RYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSS+   P 
Sbjct: 1   MADDDDDGTLFSPPSYRRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSSTHRPS 60

Query: 61  PSRIRRRRRRQHFVFTAEPRIAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLS 120
            SRIRRRRRR+HFVFTAEPRIAAAG PSRGLPQSILKSLPVFVH  KTDPDPIYCAVCLS
Sbjct: 61  RSRIRRRRRREHFVFTAEPRIAAAGAPSRGLPQSILKSLPVFVHLAKTDPDPIYCAVCLS 120

Query: 121 EFEENEIGRSIPKCNHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAID 180
           EFEENEIGRSIPKCNH FHVGCIDMWFYSH TCPLCRSEVKPEP C SGP    GEIAID
Sbjct: 121 EFEENEIGRSIPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEPGCGSGP---CGEIAID 180

Query: 181 VCELGSRSGEEETDHRCPVEMAASVEVVDDESRHVNDMSDDGTSRATVNFVKSLSVKEEI 240
           V E+GSRSGEEE D  CPVEMAASVEVV+DESRHVNDMSDDGTSRATVNFVKSLSVKEEI
Sbjct: 181 VSEVGSRSGEEERDGGCPVEMAASVEVVEDESRHVNDMSDDGTSRATVNFVKSLSVKEEI 240

Query: 241 EAVGSER 245
           EA GSER
Sbjct: 241 EAAGSER 244

BLAST of CsaV3_6G023850 vs. NCBI nr
Match: XP_038875154.1 (RING-H2 finger protein ATL2-like [Benincasa hispida])

HSP 1 Score: 389.0 bits (998), Expect = 2.9e-104
Identity = 206/246 (83.74%), Postives = 212/246 (86.18%), Query Frame = 0

Query: 1   MADDDDDASLLYPPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRP-- 60
           MADDDDD  L  PPSY RYA SGKIMLGAIILLLFVVILMICLHLYVRL+LLSS+ R   
Sbjct: 1   MADDDDDGGLFSPPSYKRYAFSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQSH 60

Query: 61  SRIRRRRRRQHFVFTAEPRIAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSE 120
           SRIRRRRRR+HFVFTAEPRIAAA  PS GLPQSILKSLPVFVHS K DPDPIYCAVCLSE
Sbjct: 61  SRIRRRRRREHFVFTAEPRIAAA--PSHGLPQSILKSLPVFVHSGKPDPDPIYCAVCLSE 120

Query: 121 FEENEIGRSIPKCNHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAIDV 180
           FEENEIGR IPKCNHSFHVGCIDMWFYSH TCPLCRSEVKPE    SGP DDP EIAID+
Sbjct: 121 FEENEIGRIIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPELGSGSGPFDDPVEIAIDI 180

Query: 181 CELGSRSGEEETDHRCPVEMAASVEVVDDESRHVNDMSDDGTSRATVNFVKSLSVKEEIE 240
            E GS SGEEE D  CPVEMAASVE+VD+ESR V DMSDDGTSR T NFVKSLSVKEEIE
Sbjct: 181 SEPGSSSGEEEPDRWCPVEMAASVELVDNESRQVVDMSDDGTSRITANFVKSLSVKEEIE 240

Query: 241 AVGSER 245
           AV SER
Sbjct: 241 AVHSER 244

BLAST of CsaV3_6G023850 vs. NCBI nr
Match: XP_023006465.1 (RING-H2 finger protein ATL2-like [Cucurbita maxima])

HSP 1 Score: 336.3 bits (861), Expect = 2.3e-88
Identity = 179/246 (72.76%), Postives = 196/246 (79.67%), Query Frame = 0

Query: 1   MADDDDDASLLY-PPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPS 60
           MADDDDD   L+ P S+  YALSGKIMLG +I+LLFVVILMICLHLYVRL+LLSS+ R S
Sbjct: 1   MADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQS 60

Query: 61  RI-RRRRRRQHFVFTAEPRIAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSE 120
           R  RRRRRR  F FT EPRIAAA   SRGLP SILK+LPVFVHS K DPDP+YCAVCLSE
Sbjct: 61  RSHRRRRRRVQFEFTTEPRIAAAS--SRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLSE 120

Query: 121 FEENEIGRSIPKCNHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAIDV 180
           FEENEIGR+IPKCNHSFHVGCIDMWFYSH TCPLCRSEVKPEP  ESGP DDP EI +DV
Sbjct: 121 FEENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLDV 180

Query: 181 CELGSRSGEEETDHRCPVEMAASVEVVDDESRHVNDMSDDGTSRATVNFVKSLSVKEEIE 240
           CE GSRS E+E D  CPVEMAASVE+VDD SR V D     TS  T +F+KSLS+K  + 
Sbjct: 181 CEPGSRSSEDEPDRECPVEMAASVELVDDASRPVAD-----TSETTTSFMKSLSLKRILS 239

Query: 241 AVGSER 245
              +ER
Sbjct: 241 RDATER 239

BLAST of CsaV3_6G023850 vs. NCBI nr
Match: KAG7013653.1 (RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 329.7 bits (844), Expect = 2.1e-86
Identity = 175/243 (72.02%), Postives = 193/243 (79.42%), Query Frame = 0

Query: 3   DDDDDASLLYPPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSRI- 62
           DDDD   L  P S+  YALSGKIMLGA+I+LLFVVILMICLHLYVRL+LLSS+ R SR  
Sbjct: 5   DDDDGGGLFSPSSFKSYALSGKIMLGAVIVLLFVVILMICLHLYVRLYLLSSSRRQSRSH 64

Query: 63  RRRRRRQHFVFTAEPRIAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSEFEE 122
           RRRRRR  F F  EPRIAAA   SRGLPQSILKSLPVFVHS K DPDP+YCAVCLSEFEE
Sbjct: 65  RRRRRRVQFEFPMEPRIAAAS--SRGLPQSILKSLPVFVHSMKPDPDPVYCAVCLSEFEE 124

Query: 123 NEIGRSIPKCNHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAIDVCEL 182
           NEIGR+IPKCNHSFHVGCIDMWFYSH TCPLCRSEVKPEP  ESGP +DP E+ +DVCE 
Sbjct: 125 NEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSNDPVELVLDVCEP 184

Query: 183 GSRSGEEETDHRCPVEMAASVEVVDDESRHVNDMSDDGTSRATVNFVKSLSVKEEIEAVG 242
           GSRS E+E    CPVEMAASVE+VDDESR V  MS+      T +FVKSLS+K  +    
Sbjct: 185 GSRSSEDEPVRECPVEMAASVEMVDDESRPVAGMSE-----TTTSFVKSLSLKRILSRDA 240

Query: 243 SER 245
           ++R
Sbjct: 245 TKR 240

BLAST of CsaV3_6G023850 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-40
Identity = 99/183 (54.10%), Postives = 120/183 (65.57%), Query Frame = 0

Query: 19  YALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSRIRRRRRRQHFV-FTAEPR 78
           YA+SGKIML AI++L FVVILM+ LHLY R +LL +  R  R R R RR   V FTA+P 
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 79  IAAAG-VPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSEFEENEIGRSIPKCNHSFH 138
            AA   V SRGL  +++KSLPVF  S++T  DPI CAVCLSEFEE+E GR +P C H+FH
Sbjct: 84  TAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFH 143

Query: 139 VGCIDMWFYSHATCPLCRSEVKPEPECES--GPHDDPGEIAID-----VCELGSRSGEEE 193
           V CIDMWF+SH+TCPLCRS V+     ES     +    IA+D     V E  S SG  +
Sbjct: 144 VDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPSSSSGLTD 203

BLAST of CsaV3_6G023850 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 8.0e-28
Identity = 68/144 (47.22%), Postives = 88/144 (61.11%), Query Frame = 0

Query: 19  YALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSRIRRRRRRQHFVFTAEPRI 78
           YAL+GKIML ++I+L   VI+++C H Y R           RIRRR R      +A PR 
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHN---RRIRRRIRSHLRTLSASPR- 81

Query: 79  AAAGVPSRGLPQSILKSLPVFVHSEKTDPDP---IYCAVCLSEFEENEIGRSIPKCNHSF 138
                  + L Q++L  +P+FV+S K  P P     C+VCLSEFEE + GR +PKC HSF
Sbjct: 82  ------DQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSF 141

Query: 139 HVGCIDMWFYSHATCPLCRSEVKP 160
           HV CID WF S +TCPLCR+ V+P
Sbjct: 142 HVDCIDTWFRSRSTCPLCRAPVQP 155

BLAST of CsaV3_6G023850 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.0e-27
Identity = 78/190 (41.05%), Postives = 108/190 (56.84%), Query Frame = 0

Query: 17  TRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSRIRRRRRRQHFVFTAEP 76
           +RY+L+GKIML ++I+L   VIL++C H Y R        R +R  RRR   H    A  
Sbjct: 20  SRYSLNGKIMLASVIILFVAVILILCFHSYARWLF----RRQNRRIRRRISAHLRSLAAA 79

Query: 77  RIAAAGVPSRG-LPQSILKSLPVFVHSEKTDPDPI-YCAVCLSEFEENEIGRSIPKCNHS 136
           R       S   L  ++L+ +P+FV+S KT   P+  C+VCLSEFEE++ GR +PKC H 
Sbjct: 80  RDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHV 139

Query: 137 FHVGCIDMWFYSHATCPLCRSEVKP-EPECESGPHDD--PGEIAIDVCELGSRSGEEETD 196
           FHV CID WF S ++CPLCR+ V+P +P  E  P     P    I+  E GS S  +E++
Sbjct: 140 FHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTEAGSSSSSDESE 199

Query: 197 HRCPVEMAAS 202
              P   + S
Sbjct: 200 SSTPSSSSGS 205

BLAST of CsaV3_6G023850 vs. ExPASy Swiss-Prot
Match: Q8LF65 (RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 6.7e-27
Identity = 75/198 (37.88%), Postives = 107/198 (54.04%), Query Frame = 0

Query: 26  MLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSRIRRRRRRQHFVFTAEPRIAAAGVPS 85
           ML   IL+L +VILM+ LHLY R +LL S+P        R      F  +P    +  P 
Sbjct: 1   MLTTTILILLIVILMVSLHLYYRWYLLRSSP------FNRTTAASTFFTDP----SSTPG 60

Query: 86  RGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSEFEENEIGRSIPKCNHSFHVGCIDMWFY 145
            GL  SI+KSLP+F  S  T    + C+VCLSEF++NE GR +P C H+FHV CIDMWF+
Sbjct: 61  -GLNPSIIKSLPIFTFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFH 120

Query: 146 SHATCPLCRSEVKPEPECESGPHDDPGEIAIDVC-----ELGSRSGEEETDHRCPVEMAA 205
           SH++CPLCRS+++P      G      E+AI +      +     G E T    P +   
Sbjct: 121 SHSSCPLCRSQIEP---FAGGVKSSMDEVAISISDPVYGDTNHHEGTETTGDSVPEDSQR 180

Query: 206 SVEVVDDESRHVNDMSDD 219
               ++   R++ ++ +D
Sbjct: 181 KPAAIEISQRNLGEIEND 184

BLAST of CsaV3_6G023850 vs. ExPASy Swiss-Prot
Match: Q9SLC3 (E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.6e-20
Identity = 58/160 (36.25%), Postives = 83/160 (51.88%), Query Frame = 0

Query: 14  PSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSRIRRRRRRQHFVFT 73
           P+ + Y L+ KIML A+  L  V++++  LHLY R  L            RRRR+ F   
Sbjct: 20  PNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVL------------RRRREAFRGL 79

Query: 74  AEPRIAAAGVPSRGLPQSILKSLPVFV--HSEKTDPDPIYCAVCLSEFEENEIGRSIPKC 133
                    +P RGL  +++ SLP F    ++        CAVCLS  +E +  R +P C
Sbjct: 80  PVIFRHPFEMPKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNC 139

Query: 134 NHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDP 172
            H FHV C+D W  + +TCP+CR+EV+P P  E  P + P
Sbjct: 140 KHIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEPEPREGP 167

BLAST of CsaV3_6G023850 vs. ExPASy TrEMBL
Match: A0A0A0KF25 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G318710 PE=4 SV=1)

HSP 1 Score: 490.0 bits (1260), Expect = 5.9e-135
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0

Query: 1   MADDDDDASLLYPPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSR 60
           MADDDDDASLLYPPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSR
Sbjct: 1   MADDDDDASLLYPPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSR 60

Query: 61  IRRRRRRQHFVFTAEPRIAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSEFE 120
           IRRRRRRQHFVFTAEPRIAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSEFE
Sbjct: 61  IRRRRRRQHFVFTAEPRIAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSEFE 120

Query: 121 ENEIGRSIPKCNHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAIDVCE 180
           ENEIGRSIPKCNHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAIDVCE
Sbjct: 121 ENEIGRSIPKCNHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAIDVCE 180

Query: 181 LGSRSGEEETDHRCPVEMAASVEVVDDESRHVNDMSDDGTSRATVNFVKSLSVKEEIEAV 240
           LGSRSGEEETDHRCPVEMAASVEVVDDESRHVNDMSDDGTSRATVNFVKSLSVKEEIEAV
Sbjct: 181 LGSRSGEEETDHRCPVEMAASVEVVDDESRHVNDMSDDGTSRATVNFVKSLSVKEEIEAV 240

Query: 241 GSER 245
           GSER
Sbjct: 241 GSER 244

BLAST of CsaV3_6G023850 vs. ExPASy TrEMBL
Match: A0A1S3C7X4 (RING-H2 finger protein ATL2-like OS=Cucumis melo OX=3656 GN=LOC103497834 PE=4 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 3.7e-113
Identity = 217/247 (87.85%), Postives = 222/247 (89.88%), Query Frame = 0

Query: 1   MADDDDDASLLYPPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSST---PR 60
           MADDDDD +L  PPSY RYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSS+   P 
Sbjct: 1   MADDDDDGTLFSPPSYRRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSSTHRPS 60

Query: 61  PSRIRRRRRRQHFVFTAEPRIAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLS 120
            SRIRRRRRR+HFVFTAEPRIAAAG PSRGLPQSILKSLPVFVH  KTDPDPIYCAVCLS
Sbjct: 61  RSRIRRRRRREHFVFTAEPRIAAAGAPSRGLPQSILKSLPVFVHLAKTDPDPIYCAVCLS 120

Query: 121 EFEENEIGRSIPKCNHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAID 180
           EFEENEIGRSIPKCNH FHVGCIDMWFYSH TCPLCRSEVKPEP C SGP    GEIAID
Sbjct: 121 EFEENEIGRSIPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEPGCGSGP---CGEIAID 180

Query: 181 VCELGSRSGEEETDHRCPVEMAASVEVVDDESRHVNDMSDDGTSRATVNFVKSLSVKEEI 240
           V E+GSRSGEEE D  CPVEMAASVEVV+DESRHVNDMSDDGTSRATVNFVKSLSVKEEI
Sbjct: 181 VSEVGSRSGEEERDGGCPVEMAASVEVVEDESRHVNDMSDDGTSRATVNFVKSLSVKEEI 240

Query: 241 EAVGSER 245
           EA GSER
Sbjct: 241 EAAGSER 244

BLAST of CsaV3_6G023850 vs. ExPASy TrEMBL
Match: A0A6J1L074 (RING-H2 finger protein ATL2-like OS=Cucurbita maxima OX=3661 GN=LOC111499181 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 1.1e-88
Identity = 179/246 (72.76%), Postives = 196/246 (79.67%), Query Frame = 0

Query: 1   MADDDDDASLLY-PPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPS 60
           MADDDDD   L+ P S+  YALSGKIMLG +I+LLFVVILMICLHLYVRL+LLSS+ R S
Sbjct: 1   MADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQS 60

Query: 61  RI-RRRRRRQHFVFTAEPRIAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSE 120
           R  RRRRRR  F FT EPRIAAA   SRGLP SILK+LPVFVHS K DPDP+YCAVCLSE
Sbjct: 61  RSHRRRRRRVQFEFTTEPRIAAAS--SRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLSE 120

Query: 121 FEENEIGRSIPKCNHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAIDV 180
           FEENEIGR+IPKCNHSFHVGCIDMWFYSH TCPLCRSEVKPEP  ESGP DDP EI +DV
Sbjct: 121 FEENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLDV 180

Query: 181 CELGSRSGEEETDHRCPVEMAASVEVVDDESRHVNDMSDDGTSRATVNFVKSLSVKEEIE 240
           CE GSRS E+E D  CPVEMAASVE+VDD SR V D     TS  T +F+KSLS+K  + 
Sbjct: 181 CEPGSRSSEDEPDRECPVEMAASVELVDDASRPVAD-----TSETTTSFMKSLSLKRILS 239

Query: 241 AVGSER 245
              +ER
Sbjct: 241 RDATER 239

BLAST of CsaV3_6G023850 vs. ExPASy TrEMBL
Match: A0A6J1H376 (RING-H2 finger protein ATL2-like OS=Cucurbita moschata OX=3662 GN=LOC111459976 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 1.0e-86
Identity = 175/243 (72.02%), Postives = 193/243 (79.42%), Query Frame = 0

Query: 3   DDDDDASLLYPPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSRI- 62
           DDDD   L  P S+  YALSGKIMLGA+I+LLFVVILMICLHLYVRL+LLSS+ R SR  
Sbjct: 5   DDDDGGGLFSPSSFKSYALSGKIMLGAVIVLLFVVILMICLHLYVRLYLLSSSRRQSRSH 64

Query: 63  RRRRRRQHFVFTAEPRIAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSEFEE 122
           RRRRRR  F FT EPRIAAA   SRGLPQSILKSLPVFVHS K DPDP+YCAVCLSEFEE
Sbjct: 65  RRRRRRVQFEFTTEPRIAAAS--SRGLPQSILKSLPVFVHSMKPDPDPVYCAVCLSEFEE 124

Query: 123 NEIGRSIPKCNHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAIDVCEL 182
           NEIGR+IPKCNHSFHVGCIDMWFYSH TCPLCRSEVKPEP  ESGP +DP E+ +DVCE 
Sbjct: 125 NEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSNDPVELVLDVCEP 184

Query: 183 GSRSGEEETDHRCPVEMAASVEVVDDESRHVNDMSDDGTSRATVNFVKSLSVKEEIEAVG 242
           GSRS E+E    C VEMAASVE+VDDESR   DMS+      T +FVKSLS+K  +    
Sbjct: 185 GSRSSEDEPVRECLVEMAASVELVDDESRPAADMSE-----TTTSFVKSLSLKRILSRDA 240

Query: 243 SER 245
           ++R
Sbjct: 245 TKR 240

BLAST of CsaV3_6G023850 vs. ExPASy TrEMBL
Match: A0A6J1CAT0 (RING-H2 finger protein ATL2-like OS=Momordica charantia OX=3673 GN=LOC111009784 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 2.0e-74
Identity = 164/248 (66.13%), Postives = 178/248 (71.77%), Query Frame = 0

Query: 1   MADDDDDASLLYPPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSR 60
           MADDDDD     PPSY RYALSGKIMLGAII+LLFVVILMICLHLYVRL+LLSS  R + 
Sbjct: 1   MADDDDD-GFFSPPSYKRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAP 60

Query: 61  IRRRRRRQHFVFTAEPR-IAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSEF 120
            RRR RR HFVFTAEPR  AAA  PSRGLPQSILKSLPVFVHS K DPDPI CAVCLSEF
Sbjct: 61  RRRRHRRAHFVFTAEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCLSEF 120

Query: 121 EENEIGRSIPKCNHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAIDVC 180
           EENEIGR IPKC HSFHVGCIDMWFYSH TCPLCRSEV+PE   ++ P         D+ 
Sbjct: 121 EENEIGRIIPKCKHSFHVGCIDMWFYSHVTCPLCRSEVQPETGSDNPPDVSVSIHDPDIP 180

Query: 181 ELGSRSGE----EETDHRCPVEMAASVEVV---------DDESRHVNDMSDDGTSRATVN 235
           E G  SG     EE     P E+ + VE+V         ++  R ++DMS  GTSR T N
Sbjct: 181 EPGPSSGSTRSGEEPGCPSPSELPSLVELVVASSEESISEEGLRQIDDMSVHGTSRTTAN 240

BLAST of CsaV3_6G023850 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 168.3 bits (425), Expect = 7.6e-42
Identity = 99/183 (54.10%), Postives = 120/183 (65.57%), Query Frame = 0

Query: 19  YALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSRIRRRRRRQHFV-FTAEPR 78
           YA+SGKIML AI++L FVVILM+ LHLY R +LL +  R  R R R RR   V FTA+P 
Sbjct: 24  YAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVFFTADPS 83

Query: 79  IAAAG-VPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSEFEENEIGRSIPKCNHSFH 138
            AA   V SRGL  +++KSLPVF  S++T  DPI CAVCLSEFEE+E GR +P C H+FH
Sbjct: 84  TAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFH 143

Query: 139 VGCIDMWFYSHATCPLCRSEVKPEPECES--GPHDDPGEIAID-----VCELGSRSGEEE 193
           V CIDMWF+SH+TCPLCRS V+     ES     +    IA+D     V E  S SG  +
Sbjct: 144 VDCIDMWFHSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPSSSSGLTD 203

BLAST of CsaV3_6G023850 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 5.7e-29
Identity = 68/144 (47.22%), Postives = 88/144 (61.11%), Query Frame = 0

Query: 19  YALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSRIRRRRRRQHFVFTAEPRI 78
           YAL+GKIML ++I+L   VI+++C H Y R           RIRRR R      +A PR 
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHN---RRIRRRIRSHLRTLSASPR- 81

Query: 79  AAAGVPSRGLPQSILKSLPVFVHSEKTDPDP---IYCAVCLSEFEENEIGRSIPKCNHSF 138
                  + L Q++L  +P+FV+S K  P P     C+VCLSEFEE + GR +PKC HSF
Sbjct: 82  ------DQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSF 141

Query: 139 HVGCIDMWFYSHATCPLCRSEVKP 160
           HV CID WF S +TCPLCR+ V+P
Sbjct: 142 HVDCIDTWFRSRSTCPLCRAPVQP 155

BLAST of CsaV3_6G023850 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 125.2 bits (313), Expect = 7.4e-29
Identity = 78/190 (41.05%), Postives = 108/190 (56.84%), Query Frame = 0

Query: 17  TRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSRIRRRRRRQHFVFTAEP 76
           +RY+L+GKIML ++I+L   VIL++C H Y R        R +R  RRR   H    A  
Sbjct: 20  SRYSLNGKIMLASVIILFVAVILILCFHSYARWLF----RRQNRRIRRRISAHLRSLAAA 79

Query: 77  RIAAAGVPSRG-LPQSILKSLPVFVHSEKTDPDPI-YCAVCLSEFEENEIGRSIPKCNHS 136
           R       S   L  ++L+ +P+FV+S KT   P+  C+VCLSEFEE++ GR +PKC H 
Sbjct: 80  RDPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHV 139

Query: 137 FHVGCIDMWFYSHATCPLCRSEVKP-EPECESGPHDD--PGEIAIDVCELGSRSGEEETD 196
           FHV CID WF S ++CPLCR+ V+P +P  E  P     P    I+  E GS S  +E++
Sbjct: 140 FHVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDTEAGSSSSSDESE 199

Query: 197 HRCPVEMAAS 202
              P   + S
Sbjct: 200 SSTPSSSSGS 205

BLAST of CsaV3_6G023850 vs. TAIR 10
Match: AT4G15975.1 (RING/U-box superfamily protein )

HSP 1 Score: 120.6 bits (301), Expect = 1.8e-27
Identity = 75/198 (37.88%), Postives = 106/198 (53.54%), Query Frame = 0

Query: 26  MLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSRIRRRRRRQHFVFTAEPRIAAAGVPS 85
           ML   IL+L +VILM+ LHLY R +LL S+P        R      F  +P    +  P 
Sbjct: 1   MLTTTILILLIVILMVSLHLYYRWYLLRSSP------FNRTTAASTFFTDP----SSTPG 60

Query: 86  RGLPQSILKSLPVFVHSEKTDPDPIYCAVCLSEFEENEIGRSIPKCNHSFHVGCIDMWFY 145
            GL  SI+KSLP+F  S  T    + C+VCLSEF++NE GR +P C H+FHV CIDMWF+
Sbjct: 61  -GLNPSIIKSLPIFTFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVDCIDMWFH 120

Query: 146 SHATCPLCRSEVKPEPECESGPHDDPGEIAIDVC-----ELGSRSGEEETDHRCPVEMAA 205
           SH++CPLCRS ++P      G      E+AI +      +     G E T    P +   
Sbjct: 121 SHSSCPLCRSLIEP---FAGGVKSTMDEVAISISDPVYGDTNHHEGTETTGDSVPEDSQR 180

Query: 206 SVEVVDDESRHVNDMSDD 219
               ++   R++ ++ +D
Sbjct: 181 KPAAIEISQRNLGEIEND 184

BLAST of CsaV3_6G023850 vs. TAIR 10
Match: AT2G42360.1 (RING/U-box superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 2.5e-21
Identity = 58/160 (36.25%), Postives = 83/160 (51.88%), Query Frame = 0

Query: 14  PSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSRIRRRRRRQHFVFT 73
           P+ + Y L+ KIML A+  L  V++++  LHLY R  L            RRRR+ F   
Sbjct: 20  PNPSTYDLNSKIMLAAVASLSGVILIVFALHLYARFVL------------RRRREAFRGL 79

Query: 74  AEPRIAAAGVPSRGLPQSILKSLPVFV--HSEKTDPDPIYCAVCLSEFEENEIGRSIPKC 133
                    +P RGL  +++ SLP F    ++        CAVCLS  +E +  R +P C
Sbjct: 80  PVIFRHPFEMPKRGLNPTVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNC 139

Query: 134 NHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDP 172
            H FHV C+D W  + +TCP+CR+EV+P P  E  P + P
Sbjct: 140 KHIFHVDCVDTWLTTCSTCPVCRTEVEPRPRLEPEPREGP 167

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004150504.11.2e-134100.00RING-H2 finger protein ATL2 [Cucumis sativus] >KGN47424.1 hypothetical protein C... [more]
XP_008458410.17.7e-11387.85PREDICTED: RING-H2 finger protein ATL2-like [Cucumis melo][more]
XP_038875154.12.9e-10483.74RING-H2 finger protein ATL2-like [Benincasa hispida][more]
XP_023006465.12.3e-8872.76RING-H2 finger protein ATL2-like [Cucurbita maxima][more]
KAG7013653.12.1e-8672.02RING-H2 finger protein ATL2, partial [Cucurbita argyrosperma subsp. argyrosperma... [more]
Match NameE-valueIdentityDescription
Q8L9T51.1e-4054.10RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2[more]
O222558.0e-2847.22RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1[more]
Q9LZJ61.0e-2741.05RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1[more]
Q8LF656.7e-2737.88RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2[more]
Q9SLC33.6e-2036.25E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana OX=3702 GN=ATL41 PE=1 ... [more]
Match NameE-valueIdentityDescription
A0A0A0KF255.9e-135100.00RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G318710 P... [more]
A0A1S3C7X43.7e-11387.85RING-H2 finger protein ATL2-like OS=Cucumis melo OX=3656 GN=LOC103497834 PE=4 SV... [more]
A0A6J1L0741.1e-8872.76RING-H2 finger protein ATL2-like OS=Cucurbita maxima OX=3661 GN=LOC111499181 PE=... [more]
A0A6J1H3761.0e-8672.02RING-H2 finger protein ATL2-like OS=Cucurbita moschata OX=3662 GN=LOC111459976 P... [more]
A0A6J1CAT02.0e-7466.13RING-H2 finger protein ATL2-like OS=Momordica charantia OX=3673 GN=LOC111009784 ... [more]
Match NameE-valueIdentityDescription
AT3G16720.17.6e-4254.10TOXICOS EN LEVADURA 2 [more]
AT2G47560.15.7e-2947.22RING/U-box superfamily protein [more]
AT3G62690.17.4e-2941.05AtL5 [more]
AT4G15975.11.8e-2737.88RING/U-box superfamily protein [more]
AT2G42360.12.5e-2136.25RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 112..153
e-value: 6.8E-6
score: 35.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 111..154
e-value: 2.6E-11
score: 43.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 112..154
score: 12.40076
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 78..160
e-value: 5.2E-19
score: 69.7
NoneNo IPR availablePANTHERPTHR45768E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKEcoord: 17..194
NoneNo IPR availablePANTHERPTHR45768:SF34RING-H2 FINGER PROTEIN ATL64coord: 17..194
NoneNo IPR availableCDDcd16461RING-H2_EL5_likecoord: 112..154
e-value: 1.75278E-16
score: 68.8759
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 92..160

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G023850.1CsaV3_6G023850.1mRNA