CsaV3_6G022380 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G022380
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	outer envelope pore protein 16-2, chloroplastic
Location	chr6: 15318197 .. 15321107 (-)
RNA-Seq Expression	CsaV3_6G022380
Synteny	CsaV3_6G022380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCCTCGGCCCGGGAAGCGCATGCGAACATTTCTTCTCACTGACTTTAGCGATCAAATCGACAGCAGTTCCAGATTTTGCAGTTTCAATCTCTGATTCCATACAAGATTTCGAAGAAGAAATGGGGAGTAGGAGTATTGACAATCTCTCTATGGTTGATGAAATTCGATGTTCCCATGGTGGAACATTCTTGTATGACCTTGGCCATCCTCTTCTCAATCGCGTTGCTGATAGCTTCGTCAAGGCTGCTGGGGTTCGTAACCTTGTCCGATCGTATTTTCTGTTGATTTATTGATTTGGTAGTGTTTTCGCAGTGGAACTTAAATGTGGTAGCCTAAGATGTGTATGGTTTGTTTTACAGATAGGTGCATTGCAATCTGTATCTCGAGAGGCTTATTTTACGGTTGCAGGAAGTAAGATTCGTCTTCATTGAGTATTTCAATTTTGATCCTCTTGATTTTAATGGCATCTCTCTGTTTTGATTTCGTTTCGCTTTCGCGTATTCTCGTCTAGGAGACGGTTGATATGTTGAGATTAGTTAACAAAAAGTTGTAATGCTTGACGTGAAGAATGTTATCATCCGTACAGGTGTTGATTCGAACATTGCACCACCGCCTGAATTATCGAGTATGAGAAAGCAACGTTTTCCAGGTCTTAAAGGTACTCATTTTTTGTCCGAAGTAAGCTATGTTTATCCATAATCAATGTCATTCTTCATTCTGCCTATTGTGTTTGATTTTCTTTTTCTTGCCTGATGAAGATTGAACTATGTATGTTGTAAATTGAGTTCTAATAATTGTGTGTGTTTTAGATTGACACCACTTGTTTACTTATGATTGAGTTCTAAATTCTAATAATTCTTAGTCCGAAGTTAGTTTGTCCTTCGAGATGATTGAAGCTCATTTCTTCATATGACATTACAGGTGAAACCAACAAAGAGTCCCTTGAAGCCATGGTGAGTGTTTGTAACGGGTGATTGAAATGTTGGATCTGTGATTAATTATTTGCAGTGGTAGTGGCCGATAATCATCTTTTATAAATATTCATTTTATGGTATATTTCAGGTGAAGAGCGTGGGAAAAGAATCTATCCAATGGGGTCAGTTTTACCATGCTCTCTGAATTAACTGTTCAGATATATCATTCTGGCTAAATGTATTTCTTGCTTATGTGGTTCATGTTTTTATGCCGTTAGTTACACAACACATTTGGTTGAATGAGAACTTTTGCTTTTATGTTAAATGCTTTTTACAAAGGGAAGTATTTGGTTCTTCTTAAGATTTTCCCTAGATACCTTTATTGTTTCTACCCTTCCACGTTTGGAGGTTGTCAAATTTACTTAAAGGGGCCGCCGAGTTAGGTTAATAAGTCAGGTTAATTTGTTGGGGTTGACGTCAGTAAGTTGTGTTTGGGGTGATAAGATTTGAGTTCTCGATAATTGCCAAAAATTGGAGGATGAAGTTACTAAATAAACTGCAGCTGTTTACACCCAGTCGGCCAATTGGGCCAGTGTTTAAAAAAGGCCCTTGGGCACCGCCACATCAAGGTGCAGGTCTGGCGCCTAACCCTTAAAAAGTGAGCCTCATAAAACAAGGCGCGCCTTTTGTTAAGCCCGAAGGCTTAAAGCCCGTCCTGGGCCCGCCTCGGGCCTTCTTCATTACTTAACAAAAGAAGTAATAAGGAAGGGATTTCTTTCCTTATTGATGGAATCAAGTTTACTATGTCTTCTTTTCCAAGAATATTCTTTTATTTAAAGAAAAAGTGGAAGAAGCTTGCTCCTTGGAAGACTATTTTCTGTTCAAAGGATTTATGGAAAAAGGAACTACCAAGCTTTCGGTTTGGTGTTGCCTAATTTTATTTATATTGCTCTCTGCTGATATTCCTACCTTTTTCGGCTGTAGGATTAGCTGCTGGTGTTTACTCTGGTCTCACGTATGGTTTAAAGGAGGCTCGTGGAGCACACGACTGGGTAAACTTACCTTCTACAATTCACTAAGAAACATTTTGATGTTTTGATTAAAGTATGGTATTGAAAGGGAGGGATAAAACTTTTTCATTTGGTGGTAATTTCTAACTCTTGTAATGTATATCCAAAGCAAGTTTAGAGAACAAAAAAGTCTTAAGATAATATATCATATCCAATGTTCTGACCACAGTAGTGATTTCAAGTCGGGAGCGTTAAATTTTTCTTAGTAAGTGTTGGGAGAAACTTAGTAACTGTGAAACTTAATGTTTTTACCTGGGAAGTGCGGATATAGTAATATTGTCTGACGAGGTTGAGAAAAATGTAAAAGTGAACTTGAACTGGGTCTAGAGCGTTATACAAAGGGTGTATAGCTCCGGACTTGCACTGCACCGGTGTTCTGGGTTAATTGTATGAATTACAATGTAATATATACACAAAGAAGAAATACAAGAACGGAGGTAATGCACAATCTATACGGATACTTTTCTAAACAATCACGAGGAAATTTGTTTGTCTAAAATATTGAGGCCCCATTCCTTTATTCTATTGCAGAAGAATAGTGCAATCGCAGGTGCGGTGACGGGCGTAGCCGTAGCACTCACAGCAGACAAGTCTTCTCACGAGCATATCGTACAATATGCAATCACCGGTGCTGCTATGTCAACAGCTGCAAATATATTTGCGGGCATATTTTAGGGTGATCCATCAGAATATTAGGAGGAGGTATGTGTATATGGCGACCGTAGCCATTTCATAAAAACTGTGGGGTGTTGGTGACGTTCATTCCGTCTTTAATTAAACTTTCATTCTGTCTTTAATTAAGTTGACTATCTATGATGCTGTGCTTGCTTCTCTTTTGGATTCTTGGTATAATATTGAACAAGTTTGTCCCTAATGATGCTTCAATTCCTGAGTTAGACCAACAAGAAAATGCCTTTTTTTTTTT

mRNA sequence

ATGGGGAGTAGGAGTATTGACAATCTCTCTATGGTTGATGAAATTCGATGTTCCCATGGTGGAACATTCTTGTATGACCTTGGCCATCCTCTTCTCAATCGCGTTGCTGATAGCTTCGTCAAGGCTGCTGGGATAGGTGCATTGCAATCTGTATCTCGAGAGGCTTATTTTACGGTTGCAGGAAGTGTTGATTCGAACATTGCACCACCGCCTGAATTATCGAGTATGAGAAAGCAACGTTTTCCAGGTCTTAAAGGTGAAACCAACAAAGAGTCCCTTGAAGCCATGGTGAAGAGCGTGGGAAAAGAATCTATCCAATGGGGATTAGCTGCTGGTGTTTACTCTGGTCTCACGTATGGTTTAAAGGAGGCTCGTGGAGCACACGACTGGAAGAATAGTGCAATCGCAGGTGCGGTGACGGGCGTAGCCGTAGCACTCACAGCAGACAAGTCTTCTCACGAGCATATCGTACAATATGCAATCACCGGTGCTGCTATGTCAACAGCTGCAAATATATTTGCGGGCATATTTTAG

Coding sequence (CDS)

ATGGGGAGTAGGAGTATTGACAATCTCTCTATGGTTGATGAAATTCGATGTTCCCATGGTGGAACATTCTTGTATGACCTTGGCCATCCTCTTCTCAATCGCGTTGCTGATAGCTTCGTCAAGGCTGCTGGGATAGGTGCATTGCAATCTGTATCTCGAGAGGCTTATTTTACGGTTGCAGGAAGTGTTGATTCGAACATTGCACCACCGCCTGAATTATCGAGTATGAGAAAGCAACGTTTTCCAGGTCTTAAAGGTGAAACCAACAAAGAGTCCCTTGAAGCCATGGTGAAGAGCGTGGGAAAAGAATCTATCCAATGGGGATTAGCTGCTGGTGTTTACTCTGGTCTCACGTATGGTTTAAAGGAGGCTCGTGGAGCACACGACTGGAAGAATAGTGCAATCGCAGGTGCGGTGACGGGCGTAGCCGTAGCACTCACAGCAGACAAGTCTTCTCACGAGCATATCGTACAATATGCAATCACCGGTGCTGCTATGTCAACAGCTGCAAATATATTTGCGGGCATATTTTAG

Protein sequence

MGSRSIDNLSMVDEIRCSHGGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVAGSVDSNIAPPPELSSMRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTADKSSHEHIVQYAITGAAMSTAANIFAGIF*

Homology

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BLAST of CsaV3_6G022380 vs. NCBI nr
Match: XP_011657265.1 (outer envelope pore protein 16-2, chloroplastic [Cucumis sativus] >KAE8647078.1 hypothetical protein Csa_022916 [Cucumis sativus])

HSP 1 Score: 347.4 bits (890), Expect = 7.1e-92
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MGSRSIDNLSMVDEIRCSHGGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA 60
           MGSRSIDNLSMVDEIRCSHGGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA
Sbjct: 1   MGSRSIDNLSMVDEIRCSHGGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA 60

Query: 61  GSVDSNIAPPPELSSMRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYG 120
           GSVDSNIAPPPELSSMRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYG
Sbjct: 61  GSVDSNIAPPPELSSMRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYG 120

Query: 121 LKEARGAHDWKNSAIAGAVTGVAVALTADKSSHEHIVQYAITGAAMSTAANIFAGIF 178
           LKEARGAHDWKNSAIAGAVTGVAVALTADKSSHEHIVQYAITGAAMSTAANIFAGIF
Sbjct: 121 LKEARGAHDWKNSAIAGAVTGVAVALTADKSSHEHIVQYAITGAAMSTAANIFAGIF 177

[Close]

BLAST of CsaV3_6G022380 vs. NCBI nr
Match: XP_008458360.1 (PREDICTED: outer envelope pore protein 16-2, chloroplastic [Cucumis melo])

HSP 1 Score: 332.4 bits (851), Expect = 2.4e-87
Identity = 168/177 (94.92%), Postives = 173/177 (97.74%), Query Frame = 0


Query: 1   MGSRSIDNLSMVDEIRCSHGGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA 60
           MGSRSIDNLS+VDEIRC+H G FLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA
Sbjct: 1   MGSRSIDNLSLVDEIRCTHSGPFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA 60

Query: 61  GSVDSNIAPPPELSSMRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYG 120
           GSVDSN  PPPELSS+RKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYG
Sbjct: 61  GSVDSNSVPPPELSSIRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYG 120

Query: 121 LKEARGAHDWKNSAIAGAVTGVAVALTADKSSHEHIVQYAITGAAMSTAANIFAGIF 178
           LKEARGAHDWKNSAIAGAVTGVAVALT+D+SSHEHIVQYAITGAAMSTAANIFAGIF
Sbjct: 121 LKEARGAHDWKNSAIAGAVTGVAVALTSDESSHEHIVQYAITGAAMSTAANIFAGIF 177

[Close]

BLAST of CsaV3_6G022380 vs. NCBI nr
Match: XP_038875334.1 (outer envelope pore protein 16-2, chloroplastic [Benincasa hispida])

HSP 1 Score: 324.7 bits (831), Expect = 5.0e-85
Identity = 162/174 (93.10%), Postives = 172/174 (98.85%), Query Frame = 0


Query: 4   RSIDNLSMVDEIRCSHGGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVAGSV 63
           RS++NLS+VDEIRCSHGG+FLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVAGSV
Sbjct: 3   RSLENLSLVDEIRCSHGGSFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVAGSV 62

Query: 64  DSNIAPPPELSSMRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYGLKE 123
           DSN  PPPEL+S+RKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYGLKE
Sbjct: 63  DSNSVPPPELASIRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYGLKE 122

Query: 124 ARGAHDWKNSAIAGAVTGVAVALTADKSSHEHIVQYAITGAAMSTAANIFAGIF 178
           ARGAHDWKNSAIAGA+TGVAVALT+D+SSHEHIVQYAITGAA+STAANIFAGIF
Sbjct: 123 ARGAHDWKNSAIAGAMTGVAVALTSDESSHEHIVQYAITGAAVSTAANIFAGIF 176

[Close]

BLAST of CsaV3_6G022380 vs. NCBI nr
Match: TYK02947.1 (outer envelope pore protein 16-2 [Cucumis melo var. makuwa])

HSP 1 Score: 319.3 bits (817), Expect = 2.1e-83
Identity = 168/200 (84.00%), Postives = 173/200 (86.50%), Query Frame = 0


Query: 1   MGSRSIDNLSMVDEIRCSHGGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA 60
           MGSRSIDNLS+VDEIRC+H G FLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA
Sbjct: 1   MGSRSIDNLSLVDEIRCTHSGPFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA 60

Query: 61  GSVDSNIAPPPELSSMRKQRFPGLKGETNKESLEAMVKSVGKESIQWG------------ 120
           GSVDSN  PPPELSS+RKQRFPGLKGETNKESLEAMVKSVGKESIQWG            
Sbjct: 61  GSVDSNSVPPPELSSIRKQRFPGLKGETNKESLEAMVKSVGKESIQWGRYTGHLVECDLL 120

Query: 121 -----------LAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTADKSSHEHIV 178
                      LAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALT+D+SSHEHIV
Sbjct: 121 LSCPMLFANGRLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTSDESSHEHIV 180

[Close]

BLAST of CsaV3_6G022380 vs. NCBI nr
Match: XP_023514075.1 (outer envelope pore protein 16-2, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 302.4 bits (773), Expect = 2.6e-78
Identity = 153/177 (86.44%), Postives = 164/177 (92.66%), Query Frame = 0


Query: 1   MGSRSIDNLSMVDEIRCSHGGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA 60
           MGSRS++N S+VDEI+CS GGTFLYD GHPLLNRVADSF+KAAGIGALQSVSREAYFTVA
Sbjct: 1   MGSRSLENRSVVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60

Query: 61  GSVDSNIAPPPELSSMRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYG 120
           GS+DS+  PPPELSS RK+  PGLKGETNKESLEAMVKSVG+ESIQWGLAAGVYSGLTYG
Sbjct: 61  GSLDSDNGPPPELSSARKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120

Query: 121 LKEARGAHDWKNSAIAGAVTGVAVALTADKSSHEHIVQYAITGAAMSTAANIFAGIF 178
           LKEARGAHDWKNSAIAGAVTGVAVAL +D SSHE IVQ AITGAA+S AANIFAGIF
Sbjct: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIVQSAITGAAVSAAANIFAGIF 177

[Close]

BLAST of CsaV3_6G022380 vs. ExPASy Swiss-Prot
Match: Q0WMZ5 (Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP162 PE=2 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 3.0e-53
Identity = 107/172 (62.21%), Postives = 143/172 (83.14%), Query Frame = 0


Query: 11  MVDEIRCSHGGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTV---AGSVDSNI 70
           ++DEIR S     L+DLGHPLLNR+ADSFVKAAG+GALQ+VSREAYFTV   AG   +N+
Sbjct: 9   VMDEIR-SFEKAHLFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNV 68

Query: 71  APPPELSSMRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYGLKEAR-G 130
            PP E++  +K RFP L+GE++K SL+A+VK+ GKES+QWGLAAG+YSG+TYG+ E R G
Sbjct: 69  GPPSEITGNKKHRFPNLRGESSK-SLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGG 128

Query: 131 AHDWKNSAIAGAVTGVAVAL-TADKSSHEHIVQYAITGAAMSTAANIFAGIF 178
           AHDW+NSA+AGA+TG A+A+ T++++SHE +VQ A+TGAA+STAAN+ + +F
Sbjct: 129 AHDWRNSAVAGALTGAAMAMTTSERTSHEQVVQSALTGAAISTAANLLSSVF 178

[Close]

BLAST of CsaV3_6G022380 vs. ExPASy Swiss-Prot
Match: Q9ZV24 (Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP161 PE=1 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.0e-16
Identity = 50/145 (34.48%), Postives = 74/145 (51.03%), Query Frame = 0


Query: 26  DLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVAGSVDSNIAPPPELSSMRKQRFPGLK 85
           D+G+P LN   D+F+K   +G  +S++ + Y  +                         K
Sbjct: 20  DMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAID------------------------K 79

Query: 86  GETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVA 145
           G  +K +LE  +K + KE + WG A GVY G  YG++  RG+ DWKN+ +AGA TG AV 
Sbjct: 80  GSLSKSTLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATG-AVL 139

Query: 146 LTADKSSHEHIVQYAITGAAMSTAA 171
               K   + IV  AI G A++TA+
Sbjct: 140 SAVGKKGKDTIVIDAILGGALATAS 139

[Close]

BLAST of CsaV3_6G022380 vs. ExPASy Swiss-Prot
Match: Q41050 (Outer envelope pore protein 16, chloroplastic OS=Pisum sativum OX=3888 GN=OEP16 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 8.7e-16
Identity = 49/145 (33.79%), Postives = 70/145 (48.28%), Query Frame = 0


Query: 26  DLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVAGSVDSNIAPPPELSSMRKQRFPGLK 85
           D+G+P LN   D F+K   + A +SV+ + +  +                         K
Sbjct: 20  DMGNPFLNLTVDGFLKIGAVAATRSVAEDTFHIIR------------------------K 79

Query: 86  GETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVA 145
           G  +    E  +K + KE   WG  AGVY G+ YG++  RG  DWKN+   GAVTG  V+
Sbjct: 80  GSISSNDFEKSLKKMCKEGAYWGAIAGVYVGMEYGVERIRGTRDWKNAMFGGAVTGALVS 139

Query: 146 LTADKSSHEHIVQYAITGAAMSTAA 171
             A  +  + I   AITGAA++TAA
Sbjct: 140 -AASNNKKDKIAVDAITGAAIATAA 139

[Close]

BLAST of CsaV3_6G022380 vs. ExPASy Swiss-Prot
Match: Q9LZH8 (Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP164 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-04
Identity = 28/76 (36.84%), Postives = 43/76 (56.58%), Query Frame = 0


Query: 96  MVKSVGKESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTADKSSHEH 155
           + KS+G+   Q GL +GV++    GL+  RG +DW N+ + GAV G AVA++    +   
Sbjct: 52  VAKSIGRFGFQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAIST--RNWTQ 111

Query: 156 IVQYAITGAAMSTAAN 172
           +V  A   +A S  AN
Sbjct: 112 VVGMAGLVSAFSVLAN 125

[Close]

BLAST of CsaV3_6G022380 vs. ExPASy TrEMBL
Match: A0A0A0KCC7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G307410 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.5e-92
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MGSRSIDNLSMVDEIRCSHGGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA 60
           MGSRSIDNLSMVDEIRCSHGGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA
Sbjct: 50  MGSRSIDNLSMVDEIRCSHGGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA 109

Query: 61  GSVDSNIAPPPELSSMRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYG 120
           GSVDSNIAPPPELSSMRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYG
Sbjct: 110 GSVDSNIAPPPELSSMRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYG 169

Query: 121 LKEARGAHDWKNSAIAGAVTGVAVALTADKSSHEHIVQYAITGAAMSTAANIFAGIF 178
           LKEARGAHDWKNSAIAGAVTGVAVALTADKSSHEHIVQYAITGAAMSTAANIFAGIF
Sbjct: 170 LKEARGAHDWKNSAIAGAVTGVAVALTADKSSHEHIVQYAITGAAMSTAANIFAGIF 226

[Close]

BLAST of CsaV3_6G022380 vs. ExPASy TrEMBL
Match: A0A1S3C7N2 (outer envelope pore protein 16-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497794 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 1.2e-87
Identity = 168/177 (94.92%), Postives = 173/177 (97.74%), Query Frame = 0


Query: 1   MGSRSIDNLSMVDEIRCSHGGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA 60
           MGSRSIDNLS+VDEIRC+H G FLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA
Sbjct: 1   MGSRSIDNLSLVDEIRCTHSGPFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA 60

Query: 61  GSVDSNIAPPPELSSMRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYG 120
           GSVDSN  PPPELSS+RKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYG
Sbjct: 61  GSVDSNSVPPPELSSIRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYG 120

Query: 121 LKEARGAHDWKNSAIAGAVTGVAVALTADKSSHEHIVQYAITGAAMSTAANIFAGIF 178
           LKEARGAHDWKNSAIAGAVTGVAVALT+D+SSHEHIVQYAITGAAMSTAANIFAGIF
Sbjct: 121 LKEARGAHDWKNSAIAGAVTGVAVALTSDESSHEHIVQYAITGAAMSTAANIFAGIF 177

[Close]

BLAST of CsaV3_6G022380 vs. ExPASy TrEMBL
Match: A0A5D3BTY5 (Outer envelope pore protein 16-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00290 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.0e-83
Identity = 168/200 (84.00%), Postives = 173/200 (86.50%), Query Frame = 0


Query: 1   MGSRSIDNLSMVDEIRCSHGGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA 60
           MGSRSIDNLS+VDEIRC+H G FLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA
Sbjct: 1   MGSRSIDNLSLVDEIRCTHSGPFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA 60

Query: 61  GSVDSNIAPPPELSSMRKQRFPGLKGETNKESLEAMVKSVGKESIQWG------------ 120
           GSVDSN  PPPELSS+RKQRFPGLKGETNKESLEAMVKSVGKESIQWG            
Sbjct: 61  GSVDSNSVPPPELSSIRKQRFPGLKGETNKESLEAMVKSVGKESIQWGRYTGHLVECDLL 120

Query: 121 -----------LAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTADKSSHEHIV 178
                      LAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALT+D+SSHEHIV
Sbjct: 121 LSCPMLFANGRLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTSDESSHEHIV 180

[Close]

BLAST of CsaV3_6G022380 vs. ExPASy TrEMBL
Match: A0A6J1KKF2 (outer envelope pore protein 16-2, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494835 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 6.3e-78
Identity = 153/177 (86.44%), Postives = 163/177 (92.09%), Query Frame = 0


Query: 1   MGSRSIDNLSMVDEIRCSHGGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA 60
           MGSRS++N SMVDEI+CS GGTFLYD GHPLLNRVADSF+KAAGIGALQSVSREAYFTVA
Sbjct: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60

Query: 61  GSVDSNIAPPPELSSMRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYG 120
           GS+DS+  PP ELSS RK+  PGLKGETNKESLEAMVKSVG+ESIQWGLAAGVYSGLTYG
Sbjct: 61  GSLDSSNGPPLELSSARKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120

Query: 121 LKEARGAHDWKNSAIAGAVTGVAVALTADKSSHEHIVQYAITGAAMSTAANIFAGIF 178
           LKEARGAHDWKNSAIAGAVTGVAVAL +D SSHE IVQ AITGAA+S AANIFAGIF
Sbjct: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIVQSAITGAAVSAAANIFAGIF 177

[Close]

BLAST of CsaV3_6G022380 vs. ExPASy TrEMBL
Match: A0A6J1EQH2 (outer envelope pore protein 16-2, chloroplastic-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436880 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 5.4e-77
Identity = 151/177 (85.31%), Postives = 161/177 (90.96%), Query Frame = 0


Query: 1   MGSRSIDNLSMVDEIRCSHGGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVA 60
           MGSRS++N SMVDEI+CS GGTFLYD GHPLLNRVADSF+KAAGIGALQSVSREAYFTVA
Sbjct: 1   MGSRSLENRSMVDEIKCSQGGTFLYDFGHPLLNRVADSFIKAAGIGALQSVSREAYFTVA 60

Query: 61  GSVDSNIAPPPELSSMRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYG 120
           GS+DS+  P PEL   RK+  PGLKGETNKESLEAMVKSVG+ESIQWGLAAGVYSGLTYG
Sbjct: 61  GSLDSDNGPRPELPGARKRHVPGLKGETNKESLEAMVKSVGQESIQWGLAAGVYSGLTYG 120

Query: 121 LKEARGAHDWKNSAIAGAVTGVAVALTADKSSHEHIVQYAITGAAMSTAANIFAGIF 178
           LKEARGAHDWKNSAIAGAVTGVAVAL +D SSHE IVQ AITGAA+S AANIFAGIF
Sbjct: 121 LKEARGAHDWKNSAIAGAVTGVAVALASDDSSHERIVQSAITGAAVSAAANIFAGIF 177

[Close]

BLAST of CsaV3_6G022380 vs. TAIR 10
Match: AT4G16160.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 211.1 bits (536), Expect = 7.4e-55
Identity = 107/170 (62.94%), Postives = 142/170 (83.53%), Query Frame = 0


Query: 11  MVDEIRCSHGGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVAGSVDS-NIAP 70
           ++DEIR S     L+DLGHPLLNR+ADSFVKAAG+GALQ+VSREAYFTV    DS N+ P
Sbjct: 9   VMDEIR-SFEKAHLFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGFDSNNVGP 68

Query: 71  PPELSSMRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYGLKEAR-GAH 130
           P E++  +K RFP L+GE++K SL+A+VK+ GKES+QWGLAAG+YSG+TYG+ E R GAH
Sbjct: 69  PSEITGNKKHRFPNLRGESSK-SLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAH 128

Query: 131 DWKNSAIAGAVTGVAVAL-TADKSSHEHIVQYAITGAAMSTAANIFAGIF 178
           DW+NSA+AGA+TG A+A+ T++++SHE +VQ A+TGAA+STAAN+ + +F
Sbjct: 129 DWRNSAVAGALTGAAMAMTTSERTSHEQVVQSALTGAAISTAANLLSSVF 176

[Close]

BLAST of CsaV3_6G022380 vs. TAIR 10
Match: AT4G16160.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 209.5 bits (532), Expect = 2.2e-54
Identity = 107/172 (62.21%), Postives = 143/172 (83.14%), Query Frame = 0


Query: 11  MVDEIRCSHGGTFLYDLGHPLLNRVADSFVKAAGIGALQSVSREAYFTV---AGSVDSNI 70
           ++DEIR S     L+DLGHPLLNR+ADSFVKAAG+GALQ+VSREAYFTV   AG   +N+
Sbjct: 9   VMDEIR-SFEKAHLFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNV 68

Query: 71  APPPELSSMRKQRFPGLKGETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYGLKEAR-G 130
            PP E++  +K RFP L+GE++K SL+A+VK+ GKES+QWGLAAG+YSG+TYG+ E R G
Sbjct: 69  GPPSEITGNKKHRFPNLRGESSK-SLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGG 128

Query: 131 AHDWKNSAIAGAVTGVAVAL-TADKSSHEHIVQYAITGAAMSTAANIFAGIF 178
           AHDW+NSA+AGA+TG A+A+ T++++SHE +VQ A+TGAA+STAAN+ + +F
Sbjct: 129 AHDWRNSAVAGALTGAAMAMTTSERTSHEQVVQSALTGAAISTAANLLSSVF 178

[Close]

BLAST of CsaV3_6G022380 vs. TAIR 10
Match: AT2G28900.1 (outer plastid envelope protein 16-1 )

HSP 1 Score: 88.2 bits (217), Expect = 7.3e-18
Identity = 50/145 (34.48%), Postives = 74/145 (51.03%), Query Frame = 0


Query: 26  DLGHPLLNRVADSFVKAAGIGALQSVSREAYFTVAGSVDSNIAPPPELSSMRKQRFPGLK 85
           D+G+P LN   D+F+K   +G  +S++ + Y  +                         K
Sbjct: 20  DMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAID------------------------K 79

Query: 86  GETNKESLEAMVKSVGKESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVA 145
           G  +K +LE  +K + KE + WG A GVY G  YG++  RG+ DWKN+ +AGA TG AV 
Sbjct: 80  GSLSKSTLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATG-AVL 139

Query: 146 LTADKSSHEHIVQYAITGAAMSTAA 171
               K   + IV  AI G A++TA+
Sbjct: 140 SAVGKKGKDTIVIDAILGGALATAS 139

[Close]

BLAST of CsaV3_6G022380 vs. TAIR 10
Match: AT3G62880.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 48.1 bits (113), Expect = 8.3e-06
Identity = 28/76 (36.84%), Postives = 43/76 (56.58%), Query Frame = 0


Query: 96  MVKSVGKESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTADKSSHEH 155
           + KS+G+   Q GL +GV++    GL+  RG +DW N+ + GAV G AVA++    +   
Sbjct: 52  VAKSIGRFGFQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAIST--RNWTQ 111

Query: 156 IVQYAITGAAMSTAAN 172
           +V  A   +A S  AN
Sbjct: 112 VVGMAGLVSAFSVLAN 125

[Close]

BLAST of CsaV3_6G022380 vs. TAIR 10
Match: AT3G62880.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 48.1 bits (113), Expect = 8.3e-06
Identity = 28/76 (36.84%), Postives = 43/76 (56.58%), Query Frame = 0


Query: 96  MVKSVGKESIQWGLAAGVYSGLTYGLKEARGAHDWKNSAIAGAVTGVAVALTADKSSHEH 155
           + KS+G+   Q GL +GV++    GL+  RG +DW N+ + GAV G AVA++    +   
Sbjct: 52  VAKSIGRFGFQCGLVSGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAVAIST--RNWTQ 111

Query: 156 IVQYAITGAAMSTAAN 172
           +V  A   +A S  AN
Sbjct: 112 VVGMAGLVSAFSVLAN 125

The following BLAST results are available for this feature:

BLAST of CsaV3_6G022380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657265.1	7.1e-92	100.00	outer envelope pore protein 16-2, chloroplastic [Cucumis sativus] >KAE8647078.1 ...	[more]
XP_008458360.1	2.4e-87	94.92	PREDICTED: outer envelope pore protein 16-2, chloroplastic [Cucumis melo]	[more]
XP_038875334.1	5.0e-85	93.10	outer envelope pore protein 16-2, chloroplastic [Benincasa hispida]	[more]
TYK02947.1	2.1e-83	84.00	outer envelope pore protein 16-2 [Cucumis melo var. makuwa]	[more]
XP_023514075.1	2.6e-78	86.44	outer envelope pore protein 16-2, chloroplastic-like isoform X2 [Cucurbita pepo ...	[more]

BLAST of CsaV3_6G022380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WMZ5	3.0e-53	62.21	Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9ZV24	1.0e-16	34.48	Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q41050	8.7e-16	33.79	Outer envelope pore protein 16, chloroplastic OS=Pisum sativum OX=3888 GN=OEP16 ...	[more]
Q9LZH8	1.2e-04	36.84	Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CsaV3_6G022380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCC7	3.5e-92	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G307410 PE=4 SV=1	[more]
A0A1S3C7N2	1.2e-87	94.92	outer envelope pore protein 16-2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3BTY5	1.0e-83	84.00	Outer envelope pore protein 16-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A6J1KKF2	6.3e-78	86.44	outer envelope pore protein 16-2, chloroplastic-like isoform X1 OS=Cucurbita max...	[more]
A0A6J1EQH2	5.4e-77	85.31	outer envelope pore protein 16-2, chloroplastic-like isoform X1 OS=Cucurbita mos...	[more]

BLAST of CsaV3_6G022380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16160.1	7.4e-55	62.94	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT4G16160.2	2.2e-54	62.21	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT2G28900.1	7.3e-18	34.48	outer plastid envelope protein 16-1	[more]
AT3G62880.1	8.3e-06	36.84	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT3G62880.2	8.3e-06	36.84	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 32..167 e-value: 1.6E-15 score: 57.5
None	No IPR available	PANTHER	PTHR15371:SF1	OUTER ENVELOPE PORE PROTEIN 16-2, CHLOROPLASTIC	coord: 8..177
None	No IPR available	PANTHER	PTHR15371	TIM23	coord: 8..177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G022380.1	CsaV3_6G022380.1	mRNA