CsaV3_6G022250 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G022250
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 15207061 .. 15207372 (-)
RNA-Seq ExpressionCsaV3_6G022250
SyntenyCsaV3_6G022250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGGAAGAAGGAAGAATAAAGAATGAAGAGGAGAAGATTCTTCTGTGTCTGATCGTGCTTAGTCGTGTCAGGTGGCCACGTCTTTCTTCCTCATTATCTTTGTTTTATACTAATTTTCAAATTTGCAGTGTTGCCAAAATAAGTACTTCTGATCTCTTTCAGCTTTGCTGTGTTCTTCATGGACTTATGTTTTCCCAACCTGACTTTCTAACCTTGTTGGGCCCGAGATGGGTGTTTGGAGATGTTAGGGTTCTTAGTTGTATTTTCAAAAAAATAAAAACTATTAACCTAACTTCTTCGTTATAG

mRNA sequence

ATGAAGAAGGAAGAAGGAAGAATAAAGAATGAAGAGGAGAAGATTCTTCTGTGTCTGATCGTGCTTAGTCGTGTCAGGTGGCCACGTCTTTCTTCCTCATTATCTTTGTTTTATACTAATTTTCAAATTTGCAGTGTTGCCAAAATAAGTACTTCTGATCTCTTTCAGCTTTGCTGTGTTCTTCATGGACTTATGTTTTCCCAACCTGACTTTCTAACCTTGTTGGGCCCGAGATGGGTGTTTGGAGATGTTAGGGTTCTTAGTTGTATTTTCAAAAAAATAAAAACTATTAACCTAACTTCTTCGTTATAG

Coding sequence (CDS)

ATGAAGAAGGAAGAAGGAAGAATAAAGAATGAAGAGGAGAAGATTCTTCTGTGTCTGATCGTGCTTAGTCGTGTCAGGTGGCCACGTCTTTCTTCCTCATTATCTTTGTTTTATACTAATTTTCAAATTTGCAGTGTTGCCAAAATAAGTACTTCTGATCTCTTTCAGCTTTGCTGTGTTCTTCATGGACTTATGTTTTCCCAACCTGACTTTCTAACCTTGTTGGGCCCGAGATGGGTGTTTGGAGATGTTAGGGTTCTTAGTTGTATTTTCAAAAAAATAAAAACTATTAACCTAACTTCTTCGTTATAG

Protein sequence

MKKEEGRIKNEEEKILLCLIVLSRVRWPRLSSSLSLFYTNFQICSVAKISTSDLFQLCCVLHGLMFSQPDFLTLLGPRWVFGDVRVLSCIFKKIKTINLTSSL*
Homology
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BLAST of CsaV3_6G022250 vs. NCBI nr
Match: KAE8647071.1 (hypothetical protein Csa_022949 [Cucumis sativus])

HSP 1 Score: 207.2 bits (526), Expect = 6.7e-50
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MKKEEGRIKNEEEKILLCLIVLSRVRWPRLSSSLSLFYTNFQICSVAKISTSDLFQLCCV 60
           MKKEEGRIKNEEEKILLCLIVLSRVRWPRLSSSLSLFYTNFQICSVAKISTSDLFQLCCV
Sbjct: 1   MKKEEGRIKNEEEKILLCLIVLSRVRWPRLSSSLSLFYTNFQICSVAKISTSDLFQLCCV 60

Query: 61  LHGLMFSQPDFLTLLGPRWVFGDVRVLSCIFKKIKTINLTSSL 104
           LHGLMFSQPDFLTLLGPRWVFGDVRVLSCIFKKIKTINLTSSL
Sbjct: 61  LHGLMFSQPDFLTLLGPRWVFGDVRVLSCIFKKIKTINLTSSL 103

The following BLAST results are available for this feature:
BLAST of CsaV3_6G022250 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647071.16.7e-50100.00hypothetical protein Csa_022949 [Cucumis sativus][more]
BLAST of CsaV3_6G022250 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G022250 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G022250 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G022250.1CsaV3_6G022250.1mRNA