CsaV3_6G021950 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G021950
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	embryo-specific protein ATS3A-like
Location	chr6: 14949413 .. 14951396 (+)
RNA-Seq Expression	CsaV3_6G021950
Synteny	CsaV3_6G021950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTGTAATAAAGAGAAATTTAGGATTGGAAAAGCAAAATGGGAAACCTATGTTCTCAAGAAAAGAATGGCACCCTCCTCTCTCTCTCTCTCTCTCTCTTCTTTATCTAACATTTACCAATTCTGTTATCATCACAACCCATTTTCTATTTTTCTCTCCCATTCCTAACATCAGACCGGCCCTTAGTTCCCATGGCTAATTCCGGCCGAACGTCCCCCCCGTTTATCGCTCTTCTTCTCTTCTCTCTACTCTCCGCCACCCATTGTCTCCTCCATAACGATAAGGTAATCAACTTTTTTTTTAGGGCAATTACAATCAATACAAATTTTAGGGTTGGTATTATTGCTCATATTTTTCTACCCGTGAAAGACTGCTACTGATATAGTTTAGGATCTGATCATTCATACACTTCCAAAACTTTATCTTATATGTTTTGGCGTTACTTATATAATTCATATATACTTATTAATGCTTTAATATTTTTTCTTTTGCTAAATTATAAAAATTTAACTTTGCACTTTATCTAACAAAAAATACTCCTATTTTTCTTTTTAATATTTTAAGACTACTTTTACGGGTAGAAATCATTTACAAATTTCTACAACAATTGGGACTTAACATTTTATGGTAGTTAATTTCTTAGGTCTCAATTTTCTTTTTCCAAAATTGTGGAAATTTTTTACTCACAACCTTGTTGCATTAAAATGTTTTTGAAATGTAGAAAATAATATTACAATATTTTTGGAAGAAATAGGTATTTTTGTAACAAACATTAAGGTCGTGGATATTTATTATAATATATTTCTTTTGGTTAAATTTTAAATTTAGTTTTTCTAATTTAGAGAATTTAAATTAATCTTAGCAAAAACTACTTATGAACACACGCACAAAAAAAAAAAAAATTAAAAAAAATGGTATAGGTAGAATTCAACTAATTTATAATTTTATATGCATCTTAGATTATAGAGATTAAATTAATTAAGAAAAAACCAACATTATACAAATAAAAGTAAAACTCAACTTAAATTATTTCAACTCAATTAATCCATTACTTTATCTCTTTTCTTTTTTTTTAAACTATTGATAGATATTCCATTCACATAATATAAAATTTTACTATTTTCAAACAATTTTATTATTTTCAACTTTTTTAATATTTTTTTTTATATATAATTTGAAATTTAATGTTGGAGTATAATGAGACTTGTATTTATAGTAAAATAGTAATGAAATTGAGAATTATTCAATAAAACAACTAGTATAATCATCTTAATTAAATAGCAGAAAAATTGTATGTACGCGGTGACCGTGGAAACAAGTTGCACGAAAGGAGCGGACACATCAAATCACGTCAGTCTTAGATTCGGAGACACAAATTCAAACGACATTGTGGTTAGACGTTTGAATTTGAAGCACGTGAGAAGAGTGGATCCTTTAGAACCTCAAGTTCTAGACGACGTTTCCAGAAAACCATTTCAAGTTTGTATGGTTGATCAGTTTCAAGTAACCGGAAAATGCGTCACCTCACCCATATGTTACCTCTACCTTAAACTCTCTGGCACTGACGACTGGCGACCCGGATTCGTCCAAGTCCGGTCCTTGAAGGGCCCACACCTTAGCTCCAATTATTTCTATTTCCGGCGTGTATTGCCTCGTCACGTTTGGCATGGGTTTGACACGTGTCCAGGTGAAGTCACTCCTTTTGGCATGAAACGTAATAGAAAAGTTTAAATTTAGCCCTTGTTGGATTAATTTCTTTACCATGTCAATTAAACAACCAAAATATGTTATGTGGCTTCTTTTTTAATTAACGTGAGATTTTGTTTTATCATAACCCTTTTTTTAAAAATGAAAATAGCGACAATGAATCATCCTACCAAGAGTTCGCTCTTATTAAGTTTTAGTTCACACAACTATGAATAATCTATTTTTTGGTAGAATATCTCCTCCAATAAGTCTACCTAATTTAATACATCCAAATTTTGG

mRNA sequence

ATGGCTAATTCCGGCCGAACGTCCCCCCCGTTTATCGCTCTTCTTCTCTTCTCTCTACTCTCCGCCACCCATTGTCTCCTCCATAACGATAAGAAAAATTGTATGTACGCGGTGACCGTGGAAACAAGTTGCACGAAAGGAGCGGACACATCAAATCACGTCAGTCTTAGATTCGGAGACACAAATTCAAACGACATTGTGGTTAGACGTTTGAATTTGAAGCACGTGAGAAGAGTGGATCCTTTAGAACCTCAAGTTCTAGACGACGTTTCCAGAAAACCATTTCAAGTTTGTATGGTTGATCAGTTTCAAGTAACCGGAAAATGCGTCACCTCACCCATATGTTACCTCTACCTTAAACTCTCTGGCACTGACGACTGGCGACCCGGATTCGTCCAAGTCCGGTCCTTGAAGGGCCCACACCTTAGCTCCAATTATTTCTATTTCCGGCGTGTATTGCCTCGTCACGTTTGGCATGGGTTTGACACGTGTCCAGGTGAAGTCACTCCTTTTGGCATGAAACGTAATAGAAAAGTTTAA

Coding sequence (CDS)

ATGGCTAATTCCGGCCGAACGTCCCCCCCGTTTATCGCTCTTCTTCTCTTCTCTCTACTCTCCGCCACCCATTGTCTCCTCCATAACGATAAGAAAAATTGTATGTACGCGGTGACCGTGGAAACAAGTTGCACGAAAGGAGCGGACACATCAAATCACGTCAGTCTTAGATTCGGAGACACAAATTCAAACGACATTGTGGTTAGACGTTTGAATTTGAAGCACGTGAGAAGAGTGGATCCTTTAGAACCTCAAGTTCTAGACGACGTTTCCAGAAAACCATTTCAAGTTTGTATGGTTGATCAGTTTCAAGTAACCGGAAAATGCGTCACCTCACCCATATGTTACCTCTACCTTAAACTCTCTGGCACTGACGACTGGCGACCCGGATTCGTCCAAGTCCGGTCCTTGAAGGGCCCACACCTTAGCTCCAATTATTTCTATTTCCGGCGTGTATTGCCTCGTCACGTTTGGCATGGGTTTGACACGTGTCCAGGTGAAGTCACTCCTTTTGGCATGAAACGTAATAGAAAAGTTTAA

Protein sequence

MANSGRTSPPFIALLLFSLLSATHCLLHNDKKNCMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGMKRNRKV*

Homology

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BLAST of CsaV3_6G021950 vs. NCBI nr
Match: XP_011657238.1 (embryo-specific protein ATS3A isoform X2 [Cucumis sativus] >KGN47335.1 hypothetical protein Csa_022990 [Cucumis sativus])

HSP 1 Score: 381.7 bits (979), Expect = 3.5e-102
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MANSGRTSPPFIALLLFSLLSATHCLLHNDKKNCMYAVTVETSCTKGADTSNHVSLRFGD 60
           MANSGRTSPPFIALLLFSLLSATHCLLHNDKKNCMYAVTVETSCTKGADTSNHVSLRFGD
Sbjct: 1   MANSGRTSPPFIALLLFSLLSATHCLLHNDKKNCMYAVTVETSCTKGADTSNHVSLRFGD 60

Query: 61  TNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKPFQVCMVDQFQVTGKCVTSPICYLYLK 120
           TNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKPFQVCMVDQFQVTGKCVTSPICYLYLK
Sbjct: 61  TNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKPFQVCMVDQFQVTGKCVTSPICYLYLK 120

Query: 121 LSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGMKRNRKV 180
           LSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGMKRNRKV
Sbjct: 121 LSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGMKRNRKV 179

[Close]

BLAST of CsaV3_6G021950 vs. NCBI nr
Match: XP_004148245.1 (embryo-specific protein ATS3A isoform X1 [Cucumis sativus])

HSP 1 Score: 377.1 bits (967), Expect = 8.5e-101
Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MANSGRTSPPFIALLLFSLLSATHCLLHNDK-KNCMYAVTVETSCTKGADTSNHVSLRFG 60
           MANSGRTSPPFIALLLFSLLSATHCLLHNDK KNCMYAVTVETSCTKGADTSNHVSLRFG
Sbjct: 1   MANSGRTSPPFIALLLFSLLSATHCLLHNDKQKNCMYAVTVETSCTKGADTSNHVSLRFG 60

Query: 61  DTNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKPFQVCMVDQFQVTGKCVTSPICYLYL 120
           DTNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKPFQVCMVDQFQVTGKCVTSPICYLYL
Sbjct: 61  DTNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKPFQVCMVDQFQVTGKCVTSPICYLYL 120

Query: 121 KLSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGMKRNRKV 180
           KLSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGMKRNRKV
Sbjct: 121 KLSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGMKRNRKV 180

[Close]

BLAST of CsaV3_6G021950 vs. NCBI nr
Match: XP_008463858.1 (PREDICTED: uncharacterized protein LOC103501893 [Cucumis melo])

HSP 1 Score: 351.3 bits (900), Expect = 5.0e-93
Identity = 167/180 (92.78%), Postives = 171/180 (95.00%), Query Frame = 0


Query: 1   MANSGRTSPPFIALLLFSLLSATHCLLHNDK-KNCMYAVTVETSCTKGADTSNHVSLRFG 60
           MA +  T PPF ALLLFSLLSATHCLL NDK KNCMYAVTVETSCTKGADTSNHVSLRFG
Sbjct: 1   MAYTRGTWPPFFALLLFSLLSATHCLLGNDKEKNCMYAVTVETSCTKGADTSNHVSLRFG 60

Query: 61  DTNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKPFQVCMVDQFQVTGKCVTSPICYLYL 120
           DTNSNDIVVRRLN KHVRRVDPLEPQVLDD+SRKPFQVCMVDQFQVTGKCVTSPICYLYL
Sbjct: 61  DTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKPFQVCMVDQFQVTGKCVTSPICYLYL 120

Query: 121 KLSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGMKRNRKV 180
           KLSG DDWRPGFVQVRSL+GPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFG+KRNRKV
Sbjct: 121 KLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV 180

[Close]

BLAST of CsaV3_6G021950 vs. NCBI nr
Match: XP_038902188.1 (embryo-specific protein ATS3A-like [Benincasa hispida])

HSP 1 Score: 335.5 bits (859), Expect = 2.8e-88
Identity = 158/181 (87.29%), Postives = 167/181 (92.27%), Query Frame = 0


Query: 1   MANSGRTSPPF--IALLLFSLLSATHCLLHNDKKNCMYAVTVETSCTKGADTSNHVSLRF 60
           MA+SG TS  F  + LLLFSLLS THC + +DKKNCMYAVTVET+CTKGADTSNHVSLRF
Sbjct: 1   MADSGGTSSTFYVLLLLLFSLLSTTHCFVPDDKKNCMYAVTVETTCTKGADTSNHVSLRF 60

Query: 61  GDTNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKPFQVCMVDQFQVTGKCVTSPICYLY 120
           GDTNSNDIVVRRLN K VRRVDPL+PQVLDD+SRKPFQ CMVDQFQVTGKCVTSPICYLY
Sbjct: 61  GDTNSNDIVVRRLNSKQVRRVDPLQPQVLDDMSRKPFQACMVDQFQVTGKCVTSPICYLY 120

Query: 121 LKLSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGMKRNRK 180
           LKL G DDWRPGFVQVRSL+GPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFG+KRNRK
Sbjct: 121 LKLVGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRK 180

[Close]

BLAST of CsaV3_6G021950 vs. NCBI nr
Match: XP_022146261.1 (embryo-specific protein ATS3A-like [Momordica charantia])

HSP 1 Score: 318.5 bits (815), Expect = 3.6e-83
Identity = 147/179 (82.12%), Postives = 160/179 (89.39%), Query Frame = 0


Query: 1   MANSGRTSPPFIALLLFSLLSATHCLLHNDKKNCMYAVTVETSCTKGADTSNHVSLRFGD 60
           M NSG T P F A+LL SLLSA   L+ ND K CMYAVTVET+CTKGADTSNHVSLRFGD
Sbjct: 1   MGNSGGTPPSFYAVLLISLLSAGESLVSNDTKTCMYAVTVETTCTKGADTSNHVSLRFGD 60

Query: 61  TNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKPFQVCMVDQFQVTGKCVTSPICYLYLK 120
           TNSNDIVVRRLN  HV+RVDPLEP+VLDD+SRKPFQ CMVDQFQVTGKCVTSP+CY+YLK
Sbjct: 61  TNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLK 120

Query: 121 LSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGMKRNRKV 180
           L+G DDWRPGFV+VRSL+GPHLSS YFYFRRVLPRHVWHGFDTC GEVTPFG+K +RKV
Sbjct: 121 LAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV 179

[Close]

BLAST of CsaV3_6G021950 vs. ExPASy Swiss-Prot
Match: Q681K2 (Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 7.2e-18
Identity = 45/133 (33.83%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 34  CMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRK 93
           C Y V ++TSC+  + T + +S+ FGD   N++ V+R                LDD S +
Sbjct: 48  CSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKR----------------LDDPSSR 107

Query: 94  PFQVCMVDQFQVTGKCVTSPICYLYLKLSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVL 153
            F+ C  D ++++G C+   +CYLYL   G+D W+P  V++    G  + S  FY+   L
Sbjct: 108 TFEKCSSDTYKISGPCMRD-VCYLYLLRQGSDGWKPENVKI---YGSSIRSVTFYYNLFL 160

Query: 154 PRHVWHGFDTCPG 167
           P  VW+GF+ C G
Sbjct: 168 PNSVWYGFNVCNG 160

[Close]

BLAST of CsaV3_6G021950 vs. ExPASy Swiss-Prot
Match: Q6NPM5 (Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.0e-15
Identity = 49/147 (33.33%), Postives = 68/147 (46.26%), Query Frame = 0


Query: 34  CMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRK 93
           C Y V + TSC+    T + +S+ FGD   N I   R                LDD S K
Sbjct: 48  CAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPR----------------LDDPSTK 107

Query: 94  PFQVCMVDQFQVTGKCVTSPICYLYLKLSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVL 153
            F+ C  D FQ+ G C T  ICY+YL  SG D W P  V++ S     ++   F +   +
Sbjct: 108 TFEQCSSDTFQINGPC-TYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVT---FPYNTYV 167

Query: 154 PRHVWHGFDTC----PGEVTPFGMKRN 177
           P  VW+GF+ C       V   G++R+
Sbjct: 168 PESVWYGFNYCNSASDSNVLAIGLRRS 174

[Close]

BLAST of CsaV3_6G021950 vs. ExPASy Swiss-Prot
Match: Q9LYP6 (Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.8e-11
Identity = 43/160 (26.88%), Postives = 71/160 (44.38%), Query Frame = 0


Query: 12  IALLLFSLLSATHC----LLHNDKKNCMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIV 71
           ++ L F+ +  TH     ++   +  C Y V V TSC     T + +S+ FGD + N + 
Sbjct: 8   VSFLFFAFIFVTHAFDLSIIQMQQGTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVY 67

Query: 72  VRRLNLKHVRRVDPLEPQVLDDVSRKP--FQVCMVDQFQVTGKCVTSPICYLYLKLSGTD 131
             +L                  + R P     C  + FQV G+C+  PIC LY+  +G D
Sbjct: 68  APKLG----------------GLVRGPGGLGKCSTNTFQVRGQCLNDPICSLYINRNGPD 127

Query: 132 DWRPGFVQVRSLKGPHLSSNYFYFRRVLPR-HVWHGFDTC 165
            W P  +++ S       S  F F + +P+ + W+G + C
Sbjct: 128 GWVPESIEIYS---EGSKSVKFDFSKSVPQLNTWYGHNNC 148

[Close]

BLAST of CsaV3_6G021950 vs. ExPASy TrEMBL
Match: A0A0A0KC84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301050 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.7e-102
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MANSGRTSPPFIALLLFSLLSATHCLLHNDKKNCMYAVTVETSCTKGADTSNHVSLRFGD 60
           MANSGRTSPPFIALLLFSLLSATHCLLHNDKKNCMYAVTVETSCTKGADTSNHVSLRFGD
Sbjct: 1   MANSGRTSPPFIALLLFSLLSATHCLLHNDKKNCMYAVTVETSCTKGADTSNHVSLRFGD 60

Query: 61  TNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKPFQVCMVDQFQVTGKCVTSPICYLYLK 120
           TNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKPFQVCMVDQFQVTGKCVTSPICYLYLK
Sbjct: 61  TNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKPFQVCMVDQFQVTGKCVTSPICYLYLK 120

Query: 121 LSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGMKRNRKV 180
           LSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGMKRNRKV
Sbjct: 121 LSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGMKRNRKV 179

[Close]

BLAST of CsaV3_6G021950 vs. ExPASy TrEMBL
Match: A0A1S3CK61 (uncharacterized protein LOC103501893 OS=Cucumis melo OX=3656 GN=LOC103501893 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 2.4e-93
Identity = 167/180 (92.78%), Postives = 171/180 (95.00%), Query Frame = 0


Query: 1   MANSGRTSPPFIALLLFSLLSATHCLLHNDK-KNCMYAVTVETSCTKGADTSNHVSLRFG 60
           MA +  T PPF ALLLFSLLSATHCLL NDK KNCMYAVTVETSCTKGADTSNHVSLRFG
Sbjct: 1   MAYTRGTWPPFFALLLFSLLSATHCLLGNDKEKNCMYAVTVETSCTKGADTSNHVSLRFG 60

Query: 61  DTNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKPFQVCMVDQFQVTGKCVTSPICYLYL 120
           DTNSNDIVVRRLN KHVRRVDPLEPQVLDD+SRKPFQVCMVDQFQVTGKCVTSPICYLYL
Sbjct: 61  DTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKPFQVCMVDQFQVTGKCVTSPICYLYL 120

Query: 121 KLSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGMKRNRKV 180
           KLSG DDWRPGFVQVRSL+GPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFG+KRNRKV
Sbjct: 121 KLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGIKRNRKV 180

[Close]

BLAST of CsaV3_6G021950 vs. ExPASy TrEMBL
Match: A0A6J1CYS2 (embryo-specific protein ATS3A-like OS=Momordica charantia OX=3673 GN=LOC111015516 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 1.7e-83
Identity = 147/179 (82.12%), Postives = 160/179 (89.39%), Query Frame = 0


Query: 1   MANSGRTSPPFIALLLFSLLSATHCLLHNDKKNCMYAVTVETSCTKGADTSNHVSLRFGD 60
           M NSG T P F A+LL SLLSA   L+ ND K CMYAVTVET+CTKGADTSNHVSLRFGD
Sbjct: 1   MGNSGGTPPSFYAVLLISLLSAGESLVSNDTKTCMYAVTVETTCTKGADTSNHVSLRFGD 60

Query: 61  TNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKPFQVCMVDQFQVTGKCVTSPICYLYLK 120
           TNSNDIVVRRLN  HV+RVDPLEP+VLDD+SRKPFQ CMVDQFQVTGKCVTSP+CY+YLK
Sbjct: 61  TNSNDIVVRRLNSMHVKRVDPLEPEVLDDMSRKPFQACMVDQFQVTGKCVTSPVCYVYLK 120

Query: 121 LSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGMKRNRKV 180
           L+G DDWRPGFV+VRSL+GPHLSS YFYFRRVLPRHVWHGFDTC GEVTPFG+K +RKV
Sbjct: 121 LAGADDWRPGFVKVRSLEGPHLSSGYFYFRRVLPRHVWHGFDTCGGEVTPFGIKHHRKV 179

[Close]

BLAST of CsaV3_6G021950 vs. ExPASy TrEMBL
Match: A0A5D3CVS5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00990 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 5.8e-79
Identity = 139/144 (96.53%), Postives = 142/144 (98.61%), Query Frame = 0


Query: 35  MYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKP 94
           MYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLN KHVRRVDPLEPQVLDD+SRKP
Sbjct: 1   MYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNSKHVRRVDPLEPQVLDDISRKP 60

Query: 95  FQVCMVDQFQVTGKCVTSPICYLYLKLSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLP 154
           FQVCMVDQFQVTGKCVTSPICYLYLKLSG DDWRPGFVQVRSL+GPHLSSNYFYFRRVLP
Sbjct: 61  FQVCMVDQFQVTGKCVTSPICYLYLKLSGADDWRPGFVQVRSLEGPHLSSNYFYFRRVLP 120

Query: 155 RHVWHGFDTCPGEVTPFGMKRNRK 179
           RHVWHGFDTCPGEVTPFG+KRNRK
Sbjct: 121 RHVWHGFDTCPGEVTPFGIKRNRK 144

[Close]

BLAST of CsaV3_6G021950 vs. ExPASy TrEMBL
Match: A0A6J1L2N6 (embryo-specific protein ATS3A-like OS=Cucurbita maxima OX=3661 GN=LOC111499859 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.9e-78
Identity = 141/179 (78.77%), Postives = 153/179 (85.47%), Query Frame = 0


Query: 1   MANSGRTSPPFIALLLFSLLSATHCLLHNDKKNCMYAVTVETSCTKGADTSNHVSLRFGD 60
           M  SG T+PPF ALLL SLL+A +CL    +K CMYAVTVET+CTKGADTSNHVSLRFGD
Sbjct: 1   MPFSGGTAPPFCALLLLSLLAAGNCLASTHEKACMYAVTVETTCTKGADTSNHVSLRFGD 60

Query: 61  TNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRKPFQVCMVDQFQVTGKCVTSPICYLYLK 120
           TNSNDIVV  LN KHVRRVD LEPQVLDD+ RKPFQ CMVD FQVT KCVTSPICYLYLK
Sbjct: 61  TNSNDIVVGHLNSKHVRRVDSLEPQVLDDMPRKPFQACMVDHFQVTAKCVTSPICYLYLK 120

Query: 121 LSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVLPRHVWHGFDTCPGEVTPFGMKRNRKV 180
           ++G DDWRPGFV VR L+ PHLSSN FYFRRVLPRHVWHG DTC G+VTPFG+KR+RKV
Sbjct: 121 VAGADDWRPGFVHVRLLESPHLSSNNFYFRRVLPRHVWHGLDTCRGDVTPFGIKRSRKV 179

[Close]

BLAST of CsaV3_6G021950 vs. TAIR 10
Match: AT2G41475.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 92.0 bits (227), Expect = 5.1e-19
Identity = 45/133 (33.83%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 34  CMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRK 93
           C Y V ++TSC+  + T + +S+ FGD   N++ V+R                LDD S +
Sbjct: 48  CSYTVIIKTSCSSVSYTRDKISISFGDVYGNEVYVKR----------------LDDPSSR 107

Query: 94  PFQVCMVDQFQVTGKCVTSPICYLYLKLSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVL 153
            F+ C  D ++++G C+   +CYLYL   G+D W+P  V++    G  + S  FY+   L
Sbjct: 108 TFEKCSSDTYKISGPCMRD-VCYLYLLRQGSDGWKPENVKI---YGSSIRSVTFYYNLFL 160

Query: 154 PRHVWHGFDTCPG 167
           P  VW+GF+ C G
Sbjct: 168 PNSVWYGFNVCNG 160

[Close]

BLAST of CsaV3_6G021950 vs. TAIR 10
Match: AT5G62200.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-16
Identity = 49/147 (33.33%), Postives = 68/147 (46.26%), Query Frame = 0


Query: 34  CMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRK 93
           C Y V + TSC+    T + +S+ FGD   N I   R                LDD S K
Sbjct: 48  CAYTVIISTSCSSTRYTRDQISVAFGDGYGNQIYAPR----------------LDDPSTK 107

Query: 94  PFQVCMVDQFQVTGKCVTSPICYLYLKLSGTDDWRPGFVQVRSLKGPHLSSNYFYFRRVL 153
            F+ C  D FQ+ G C T  ICY+YL  SG D W P  V++ S     ++   F +   +
Sbjct: 108 TFEQCSSDTFQINGPC-TYQICYVYLYRSGPDGWIPNTVKIYSHGSKAVT---FPYNTYV 167

Query: 154 PRHVWHGFDTC----PGEVTPFGMKRN 177
           P  VW+GF+ C       V   G++R+
Sbjct: 168 PESVWYGFNYCNSASDSNVLAIGLRRS 174

[Close]

BLAST of CsaV3_6G021950 vs. TAIR 10
Match: AT5G62210.1 (Embryo-specific protein 3, (ATS3) )

HSP 1 Score: 69.7 bits (169), Expect = 2.7e-12
Identity = 42/136 (30.88%), Postives = 67/136 (49.26%), Query Frame = 0


Query: 29  NDKKNCMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNLKHVRRVDPLEPQVLD 88
           +++++C Y V V TSC     + + V++  GD + N +V  RL+        PL      
Sbjct: 35  HEEESCPYTVIVTTSCFSPDWSRDQVTIALGDADDNQVVAPRLD-------KPLS----- 94

Query: 89  DVSRKPFQVCMVDQFQVTGKCVTSPICYLYLKLSGTDDWRPGFVQVRSLKGPHLSSNYFY 148
                 F+ C  D FQV GKC+ + IC +Y+  SGTD W P  V++         S  F 
Sbjct: 95  --GGGGFEKCSSDTFQVKGKCLNT-ICSVYIYRSGTDGWIPETVEIYK---EGSKSVKFD 152

Query: 149 FRRVLPRHVWHGFDTC 165
           F + +P ++W+G + C
Sbjct: 155 FNKNVPENIWYGNNYC 152

[Close]

BLAST of CsaV3_6G021950 vs. TAIR 10
Match: AT5G07190.1 (seed gene 3 )

HSP 1 Score: 69.7 bits (169), Expect = 2.7e-12
Identity = 43/160 (26.88%), Postives = 71/160 (44.38%), Query Frame = 0


Query: 12  IALLLFSLLSATHC----LLHNDKKNCMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIV 71
           ++ L F+ +  TH     ++   +  C Y V V TSC     T + +S+ FGD + N + 
Sbjct: 8   VSFLFFAFIFVTHAFDLSIIQMQQGTCPYTVVVMTSCLSPESTRDQISIVFGDADGNKVY 67

Query: 72  VRRLNLKHVRRVDPLEPQVLDDVSRKP--FQVCMVDQFQVTGKCVTSPICYLYLKLSGTD 131
             +L                  + R P     C  + FQV G+C+  PIC LY+  +G D
Sbjct: 68  APKLG----------------GLVRGPGGLGKCSTNTFQVRGQCLNDPICSLYINRNGPD 127

Query: 132 DWRPGFVQVRSLKGPHLSSNYFYFRRVLPR-HVWHGFDTC 165
            W P  +++ S       S  F F + +P+ + W+G + C
Sbjct: 128 GWVPESIEIYS---EGSKSVKFDFSKSVPQLNTWYGHNNC 148

[Close]

BLAST of CsaV3_6G021950 vs. TAIR 10
Match: AT5G07190.2 (seed gene 3 )

HSP 1 Score: 65.5 bits (158), Expect = 5.1e-11
Identity = 39/134 (29.10%), Postives = 60/134 (44.78%), Query Frame = 0


Query: 34  CMYAVTVETSCTKGADTSNHVSLRFGDTNSNDIVVRRLNLKHVRRVDPLEPQVLDDVSRK 93
           C Y V V TSC     T + +S+ FGD + N +   +L                  + R 
Sbjct: 6   CPYTVVVMTSCLSPESTRDQISIVFGDADGNKVYAPKLG----------------GLVRG 65

Query: 94  P--FQVCMVDQFQVTGKCVTSPICYLYLKLSGTDDWRPGFVQVRSLKGPHLSSNYFYFRR 153
           P     C  + FQV G+C+  PIC LY+  +G D W P  +++ S       S  F F +
Sbjct: 66  PGGLGKCSTNTFQVRGQCLNDPICSLYINRNGPDGWVPESIEIYS---EGSKSVKFDFSK 120

Query: 154 VLPR-HVWHGFDTC 165
            +P+ + W+G + C
Sbjct: 126 SVPQLNTWYGHNNC 120

The following BLAST results are available for this feature:

BLAST of CsaV3_6G021950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657238.1	3.5e-102	100.00	embryo-specific protein ATS3A isoform X2 [Cucumis sativus] >KGN47335.1 hypotheti...	[more]
XP_004148245.1	8.5e-101	99.44	embryo-specific protein ATS3A isoform X1 [Cucumis sativus]	[more]
XP_008463858.1	5.0e-93	92.78	PREDICTED: uncharacterized protein LOC103501893 [Cucumis melo]	[more]
XP_038902188.1	2.8e-88	87.29	embryo-specific protein ATS3A-like [Benincasa hispida]	[more]
XP_022146261.1	3.6e-83	82.12	embryo-specific protein ATS3A-like [Momordica charantia]	[more]

BLAST of CsaV3_6G021950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q681K2	7.2e-18	33.83	Embryo-specific protein ATS3A OS=Arabidopsis thaliana OX=3702 GN=ATS3A PE=1 SV=1	[more]
Q6NPM5	2.0e-15	33.33	Embryo-specific protein ATS3B OS=Arabidopsis thaliana OX=3702 GN=ATS3B PE=1 SV=1	[more]
Q9LYP6	3.8e-11	26.88	Embryo-specific protein ATS3 OS=Arabidopsis thaliana OX=3702 GN=ATS3 PE=2 SV=1	[more]

BLAST of CsaV3_6G021950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KC84	1.7e-102	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G301050 PE=4 SV=1	[more]
A0A1S3CK61	2.4e-93	92.78	uncharacterized protein LOC103501893 OS=Cucumis melo OX=3656 GN=LOC103501893 PE=...	[more]
A0A6J1CYS2	1.7e-83	82.12	embryo-specific protein ATS3A-like OS=Momordica charantia OX=3673 GN=LOC11101551...	[more]
A0A5D3CVS5	5.8e-79	96.53	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1L2N6	4.9e-78	78.77	embryo-specific protein ATS3A-like OS=Cucurbita maxima OX=3661 GN=LOC111499859 P...	[more]

BLAST of CsaV3_6G021950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41475.1	5.1e-19	33.83	Embryo-specific protein 3, (ATS3)	[more]
AT5G62200.1	1.4e-16	33.33	Embryo-specific protein 3, (ATS3)	[more]
AT5G62210.1	2.7e-12	30.88	Embryo-specific protein 3, (ATS3)	[more]
AT5G07190.1	2.7e-12	26.88	seed gene 3	[more]
AT5G07190.2	5.1e-11	29.10	seed gene 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.60.20	PLAT/LH2 domain	coord: 21..158 e-value: 2.4E-6 score: 29.3
None	No IPR available	PANTHER	PTHR31718	FAMILY NOT NAMED	coord: 6..179
None	No IPR available	PANTHER	PTHR31718:SF30	EMBRYO-SPECIFIC PROTEIN	coord: 6..179
IPR010417	Embryo-specific ATS3	PFAM	PF06232	ATS3	coord: 26..164 e-value: 1.1E-45 score: 154.6
IPR036392	PLAT/LH2 domain superfamily	SUPERFAMILY	49723	Lipase/lipooxygenase domain (PLAT/LH2 domain)	coord: 32..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G021950.1	CsaV3_6G021950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding