CsaV3_6G021610 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G021610
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 14627644 .. 14627876 (-)
RNA-Seq ExpressionCsaV3_6G021610
SyntenyCsaV3_6G021610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACGACGGCAGATCTTCGTCTCACTGCCCGACGAAATCGCCGCCTCTCCTTTCTAAAATTCAAACTGGCAATTAAGATTAGGGCCCACTTTTCCGGTCCGAACCGGGTAAGGTAAATAAATTCATATTTAATAGGCAGATGAATGAAAAGACGGAAAGAGGCCTCCAGTTCACCCCACCACCACCGGTTTTGTTTGTTTTCTTTAGATGCAAAATTGAGGAACCGTAA

mRNA sequence

ATGGCGACGACGGCAGATCTTCGTCTCACTGCCCGACGAAATCGCCGCCTCTCCTTTCTAAAATTCAAACTGGCAATTAAGATTAGGGCCCACTTTTCCGGTCCGAACCGGATGAATGAAAAGACGGAAAGAGGCCTCCAGTTCACCCCACCACCACCGGTTTTGTTTGTTTTCTTTAGATGCAAAATTGAGGAACCGTAA

Coding sequence (CDS)

ATGGCGACGACGGCAGATCTTCGTCTCACTGCCCGACGAAATCGCCGCCTCTCCTTTCTAAAATTCAAACTGGCAATTAAGATTAGGGCCCACTTTTCCGGTCCGAACCGGATGAATGAAAAGACGGAAAGAGGCCTCCAGTTCACCCCACCACCACCGGTTTTGTTTGTTTTCTTTAGATGCAAAATTGAGGAACCGTAA

Protein sequence

MATTADLRLTARRNRRLSFLKFKLAIKIRAHFSGPNRMNEKTERGLQFTPPPPVLFVFFRCKIEEP*
Homology
[Close]
BLAST of CsaV3_6G021610 vs. NCBI nr
Match: KGN47301.1 (hypothetical protein Csa_022926 [Cucumis sativus])

HSP 1 Score: 136.7 bits (343), Expect = 7.2e-29
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MATTADLRLTARRNRRLSFLKFKLAIKIRAHFSGPNRMNEKTERGLQFTPPPPVLFVFFR 60
          MATTADLRLTARRNRRLSFLKFKLAIKIRAHFSGPNRMNEKTERGLQFTPPPPVLFVFFR
Sbjct: 1  MATTADLRLTARRNRRLSFLKFKLAIKIRAHFSGPNRMNEKTERGLQFTPPPPVLFVFFR 60

Query: 61 CKIEEP 67
          CKIEEP
Sbjct: 61 CKIEEP 66

[Close]
BLAST of CsaV3_6G021610 vs. ExPASy TrEMBL
Match: A0A0A0KHP5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G290820 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.5e-29
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MATTADLRLTARRNRRLSFLKFKLAIKIRAHFSGPNRMNEKTERGLQFTPPPPVLFVFFR 60
          MATTADLRLTARRNRRLSFLKFKLAIKIRAHFSGPNRMNEKTERGLQFTPPPPVLFVFFR
Sbjct: 1  MATTADLRLTARRNRRLSFLKFKLAIKIRAHFSGPNRMNEKTERGLQFTPPPPVLFVFFR 60

Query: 61 CKIEEP 67
          CKIEEP
Sbjct: 61 CKIEEP 66

The following BLAST results are available for this feature:
BLAST of CsaV3_6G021610 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47301.17.2e-29100.00hypothetical protein Csa_022926 [Cucumis sativus][more]
BLAST of CsaV3_6G021610 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G021610 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHP53.5e-29100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G290820 PE=4 SV=1[more]
BLAST of CsaV3_6G021610 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G021610.1CsaV3_6G021610.1mRNA