CsaV3_6G021520 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G021520
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 14573033 .. 14573238 (-)
RNA-Seq ExpressionCsaV3_6G021520
SyntenyCsaV3_6G021520
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACCACTTGTTCACATTCTGGATCGGATTGTTCGGGTTGTGCCTGGGATGGCCAAGTAATTTAGTCATTCCTGTATTGCTCTGGTCTTTCCTGATCCAGAGATTTGTTATTCTTGCTTTCTGGAGGACATGGTTCCAGGATTGTTCCTAATTACCACCTCTTATTGAGGTACACCATTACCTTTTCTTCCTCCACAATTTGA

mRNA sequence

ATGAAACCACTTGTTCACATTCTGGATCGGATTGTTCGGGTTGTGCCTGGGATGGCCAAAGATTTGTTATTCTTGCTTTCTGGAGGACATGGTTCCAGGATTGTTCCTAATTACCACCTCTTATTGAGGTACACCATTACCTTTTCTTCCTCCACAATTTGA

Coding sequence (CDS)

ATGAAACCACTTGTTCACATTCTGGATCGGATTGTTCGGGTTGTGCCTGGGATGGCCAAAGATTTGTTATTCTTGCTTTCTGGAGGACATGGTTCCAGGATTGTTCCTAATTACCACCTCTTATTGAGGTACACCATTACCTTTTCTTCCTCCACAATTTGA

Protein sequence

MKPLVHILDRIVRVVPGMAKDLLFLLSGGHGSRIVPNYHLLLRYTITFSSSTI*
Homology
[Close]
BLAST of CsaV3_6G021520 vs. NCBI nr
Match: KGN47292.1 (hypothetical protein Csa_023001 [Cucumis sativus])

HSP 1 Score: 107.5 bits (267), Expect = 3.8e-20
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0 

Query: 1  MKPLVHILDRIVRVVPGMAKDLLFLLSGGHGSRIVPNYHLLLRYTITFSSSTI 54
          MKPLVHILDRIVRVVPGMAKDLLFLLSGGHGSRIVPNYHLLLRYTITFSSSTI
Sbjct: 1  MKPLVHILDRIVRVVPGMAKDLLFLLSGGHGSRIVPNYHLLLRYTITFSSSTI 53

[Close]
BLAST of CsaV3_6G021520 vs. ExPASy TrEMBL
Match: A0A0A0KFV1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G289750 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.8e-20
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0 

Query: 1  MKPLVHILDRIVRVVPGMAKDLLFLLSGGHGSRIVPNYHLLLRYTITFSSSTI 54
          MKPLVHILDRIVRVVPGMAKDLLFLLSGGHGSRIVPNYHLLLRYTITFSSSTI
Sbjct: 1  MKPLVHILDRIVRVVPGMAKDLLFLLSGGHGSRIVPNYHLLLRYTITFSSSTI 53

The following BLAST results are available for this feature:
BLAST of CsaV3_6G021520 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47292.13.8e-20100.00hypothetical protein Csa_023001 [Cucumis sativus][more]
BLAST of CsaV3_6G021520 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G021520 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFV11.8e-20100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G289750 PE=4 SV=1[more]
BLAST of CsaV3_6G021520 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G021520.1CsaV3_6G021520.1mRNA