CsaV3_6G020180 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G020180
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 14051731 .. 14051934 (-)
RNA-Seq ExpressionCsaV3_6G020180
SyntenyCsaV3_6G020180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTTCTTGACAACCTCCATCGAATCTTGGAAGTCCCTTGAAGAACTTACTCCATCCAAACGCCCCAATTGGGGCGTCCATAAACTCTCGGAGGCGCCACGTCAGAAAGGAAAGTGTCGCTGTGGTCCTCTCTACCTTCACTTTGCTGGCAATGCTAAAACTTTGGGGCCTTGCCTCCCTCGCCACCTTGTTGGCTTCCCTCAG

mRNA sequence

AATTTCTTGACAACCTCCATCGAATCTTGGAAGTCCCTTGAAGAACTTACTCCATCCAAACGCCCCAATTGGGGCGTCCATAAACTCTCGGAGGCGCCACGTCAGAAAGGAAAGTGTCGCTGTGGTCCTCTCTACCTTCACTTTGCTGGCAATGCTAAAACTTTGGGGCCTTGCCTCCCTCGCCACCTTGTTGGCTTCCCTCAG

Coding sequence (CDS)

AATTTCTTGACAACCTCCATCGAATCTTGGAAGTCCCTTGAAGAACTTACTCCATCCAAACGCCCCAATTGGGGCGTCCATAAACTCTCGGAGGCGCCACGTCAGAAAGGAAAGTGTCGCTGTGGTCCTCTCTACCTTCACTTTGCTGGCAATGCTAAAACTTTGGGGCCTTGCCTCCCTCGCCACCTTGTTGGCTTCCCTCAG

Protein sequence

NFLTTSIESWKSLEELTPSKRPNWGVHKLSEAPRQKGKCRCGPLYLHFAGNAKTLGPCLPRHLVGFPQ
Homology
[Close]
BLAST of CsaV3_6G020180 vs. NCBI nr
Match: KGN47306.2 (hypothetical protein Csa_019094, partial [Cucumis sativus])

HSP 1 Score: 152.5 bits (384), Expect = 1.3e-33
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 0 

Query: 1  NFLTTSIESWKSLEELTPSKRPNWGVHKLSEAPRQKGKCRCGPLYLHFAGNAKTLGPCLP 60
          NFLTTSIESWKSLEELTPSKRPNWGVHKLSEAPRQKGKCRCGPLYLHFAGNAKTLGPCLP
Sbjct: 1  NFLTTSIESWKSLEELTPSKRPNWGVHKLSEAPRQKGKCRCGPLYLHFAGNAKTLGPCLP 60

Query: 61 RHLVGFPQ 69
          RHLVGFPQ
Sbjct: 61 RHLVGFPQ 68

The following BLAST results are available for this feature:
BLAST of CsaV3_6G020180 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47306.21.3e-33100.00hypothetical protein Csa_019094, partial [Cucumis sativus][more]
BLAST of CsaV3_6G020180 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G020180 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G020180 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G020180.1CsaV3_6G020180.1mRNA