CsaV3_6G019110 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G019110
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 13933694 .. 13934092 (-)
RNA-Seq ExpressionCsaV3_6G019110
SyntenyCsaV3_6G019110
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGAACGTCGCTGCAACCGTCGGCCAGTTCGCGAAGCAAGCCGTACGCGTCACCTTGCGGCAGTCGTCCAGATCTGCACCGCCAGACCGAGCCGTCCACCGGGTTCGTCTGTTTCTGTCGCCGTTCACCGAAGCCGAACCCAACCGCCACCCTTTCTTTTCTTCTTCGATTCAAAACTGCCGCTGCAACCGTCGGCCACCGCGTGACCTCTGCCCAGCGCCGCGCACCTCTGTCTCCGCGCCGTTGCTCTGTCTCCGTCGAAGCCAAGCCCAGCTGCTGTCTCTATCTCCGTTCGCGAAGCAAATCGCACGCCTCTTTCACGAACAGCCTCGTCGACGCAGGTCACGCCGCATCGCACGAGTTCGGCTACGTTGCCGGGCTACTCCCGTCCGCGCGTAA

mRNA sequence

CCGAACGTCGCTGCAACCGTCGGCCAGTTCGCGAAGCAAGCCGTACGCGTCACCTTGCGGCAGTCGTCCAGATCTGCACCGCCAGACCGAGCCGTCCACCGGGTTCGTCTGTTTCTGTCGCCGTTCACCGAAGCCGAACCCAACCGCCACCCTTTCTTTTCTTCTTCGATTCAAAACTGCCGCTGCAACCGTCGGCCACCGCGTGACCTCTGCCCAGCGCCGCGCACCTCTGTCTCCGCGCCGTTGCTCTGTCTCCGTCGAAGCCAAGCCCAGCTGCTGTCTCTATCTCCGTTCGCGAAGCAAATCGCACGCCTCTTTCACGAACAGCCTCGTCGACGCAGGTCACGCCGCATCGCACGAGTTCGGCTACGTTGCCGGGCTACTCCCGTCCGCGCGTAA

Coding sequence (CDS)

CCGAACGTCGCTGCAACCGTCGGCCAGTTCGCGAAGCAAGCCGTACGCGTCACCTTGCGGCAGTCGTCCAGATCTGCACCGCCAGACCGAGCCGTCCACCGGGTTCGTCTGTTTCTGTCGCCGTTCACCGAAGCCGAACCCAACCGCCACCCTTTCTTTTCTTCTTCGATTCAAAACTGCCGCTGCAACCGTCGGCCACCGCGTGACCTCTGCCCAGCGCCGCGCACCTCTGTCTCCGCGCCGTTGCTCTGTCTCCGTCGAAGCCAAGCCCAGCTGCTGTCTCTATCTCCGTTCGCGAAGCAAATCGCACGCCTCTTTCACGAACAGCCTCGTCGACGCAGGTCACGCCGCATCGCACGAGTTCGGCTACGTTGCCGGGCTACTCCCGTCCGCGCGTAA

Protein sequence

PNVAATVGQFAKQAVRVTLRQSSRSAPPDRAVHRVRLFLSPFTEAEPNRHPFFSSSIQNCRCNRRPPRDLCPAPRTSVSAPLLCLRRSQAQLLSLSPFAKQIARLFHEQPRRRRSRRIARVRLRCRATPVRA*
Homology
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BLAST of CsaV3_6G019110 vs. NCBI nr
Match: KAE8647018.1 (hypothetical protein Csa_017026, partial [Cucumis sativus])

HSP 1 Score: 256.5 bits (654), Expect = 1.2e-64
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   PNVAATVGQFAKQAVRVTLRQSSRSAPPDRAVHRVRLFLSPFTEAEPNRHPFFSSSIQNC 60
           PNVAATVGQFAKQAVRVTLRQSSRSAPPDRAVHRVRLFLSPFTEAEPNRHPFFSSSIQNC
Sbjct: 1   PNVAATVGQFAKQAVRVTLRQSSRSAPPDRAVHRVRLFLSPFTEAEPNRHPFFSSSIQNC 60

Query: 61  RCNRRPPRDLCPAPRTSVSAPLLCLRRSQAQLLSLSPFAKQIARLFHEQPRRRRSRRIAR 120
           RCNRRPPRDLCPAPRTSVSAPLLCLRRSQAQLLSLSPFAKQIARLFHEQPRRRRSRRIAR
Sbjct: 61  RCNRRPPRDLCPAPRTSVSAPLLCLRRSQAQLLSLSPFAKQIARLFHEQPRRRRSRRIAR 120

Query: 121 VRLRCRATPVRA 133
           VRLRCRATPVRA
Sbjct: 121 VRLRCRATPVRA 132

The following BLAST results are available for this feature:
BLAST of CsaV3_6G019110 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647018.11.2e-64100.00hypothetical protein Csa_017026, partial [Cucumis sativus][more]
BLAST of CsaV3_6G019110 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G019110 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G019110 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G019110.1CsaV3_6G019110.1mRNA