CsaV3_6G019080 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G019080
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 13859951 .. 13860411 (-)
RNA-Seq ExpressionCsaV3_6G019080
SyntenyCsaV3_6G019080
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTCATTTTTCCCTACAAATATTCCCATTTTACTCACTCCATTTTCTCTTTGGGACTGCGAATGGATACAAAGAGCGACGAAGGTAAAGATAGAATAATCCCACTTTGTCTCTATCTATCGAAATTAATCTTTGAAATCCAACATCTTCCATTTTCAATCCTTTCTTTTTTCTTTGCCTCCATCGTTTCTCTCTTTCTCTTTCTCTTTCTAAAACTACCTTTATTTCTTCTCCCATCCCCTTTTTGTTCTGCTCAACAATCATATTGCATCACTGAAGTTATGCAGACAAATCAGACGGTGATAAGTTTGAGACCAAGTGGTAGCAGTGGCCTTCGTGAAAGCAGATTTGTTACCCCTCGCTTCGATTCTTTCTCACTCTCCGTTTTGGGACTGTCCAAGTGGGATTTGAATTTGAGGTTAAATGGGACTTTCTTGGCAATTTTGTTTGTGAATTAG

mRNA sequence

ATGCCTTCATTTTTCCCTACAAATATTCCCATTTTACTCACTCCATTTTCTCTTTGGGACTGCGAATGGATACAAAGAGCGACGAAGACAAATCAGACGGTGATAAGTTTGAGACCAAGTGGTAGCAGTGGCCTTCGTGAAAGCAGATTTGTTACCCCTCGCTTCGATTCTTTCTCACTCTCCGTTTTGGGACTGTCCAAGTGGGATTTGAATTTGAGGTTAAATGGGACTTTCTTGGCAATTTTGTTTGTGAATTAG

Coding sequence (CDS)

ATGCCTTCATTTTTCCCTACAAATATTCCCATTTTACTCACTCCATTTTCTCTTTGGGACTGCGAATGGATACAAAGAGCGACGAAGACAAATCAGACGGTGATAAGTTTGAGACCAAGTGGTAGCAGTGGCCTTCGTGAAAGCAGATTTGTTACCCCTCGCTTCGATTCTTTCTCACTCTCCGTTTTGGGACTGTCCAAGTGGGATTTGAATTTGAGGTTAAATGGGACTTTCTTGGCAATTTTGTTTGTGAATTAG

Protein sequence

MPSFFPTNIPILLTPFSLWDCEWIQRATKTNQTVISLRPSGSSGLRESRFVTPRFDSFSLSVLGLSKWDLNLRLNGTFLAILFVN*
Homology
[Close]
BLAST of CsaV3_6G019080 vs. NCBI nr
Match: KGN47217.1 (hypothetical protein Csa_016989 [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 1.1e-40
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 1  MPSFFPTNIPILLTPFSLWDCEWIQRATKTNQTVISLRPSGSSGLRESRFVTPRFDSFSL 60
          MPSFFPTNIPILLTPFSLWDCEWIQRATKTNQTVISLRPSGSSGLRESRFVTPRFDSFSL
Sbjct: 1  MPSFFPTNIPILLTPFSLWDCEWIQRATKTNQTVISLRPSGSSGLRESRFVTPRFDSFSL 60

Query: 61 SVLGLSKWDLNLRLNGTFLAILFVN 86
          SVLGLSKWDLNLRLNGTFLAILFVN
Sbjct: 61 SVLGLSKWDLNLRLNGTFLAILFVN 85

[Close]
BLAST of CsaV3_6G019080 vs. ExPASy TrEMBL
Match: A0A0A0KFL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G212880 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 5.1e-41
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 

Query: 1  MPSFFPTNIPILLTPFSLWDCEWIQRATKTNQTVISLRPSGSSGLRESRFVTPRFDSFSL 60
          MPSFFPTNIPILLTPFSLWDCEWIQRATKTNQTVISLRPSGSSGLRESRFVTPRFDSFSL
Sbjct: 1  MPSFFPTNIPILLTPFSLWDCEWIQRATKTNQTVISLRPSGSSGLRESRFVTPRFDSFSL 60

Query: 61 SVLGLSKWDLNLRLNGTFLAILFVN 86
          SVLGLSKWDLNLRLNGTFLAILFVN
Sbjct: 61 SVLGLSKWDLNLRLNGTFLAILFVN 85

The following BLAST results are available for this feature:
BLAST of CsaV3_6G019080 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47217.11.1e-40100.00hypothetical protein Csa_016989 [Cucumis sativus][more]
BLAST of CsaV3_6G019080 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G019080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFL45.1e-41100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G212880 PE=4 SV=1[more]
BLAST of CsaV3_6G019080 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G019080.1CsaV3_6G019080.1mRNA