CsaV3_6G019050 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G019050
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionLEA_2 domain-containing protein
Locationchr6: 13845494 .. 13846279 (+)
RNA-Seq ExpressionCsaV3_6G019050
SyntenyCsaV3_6G019050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CACTTATTCATTCATTCATTTAATTCCATTGCCCCGCCAACGCCAACGCCTCCGCTGCCGGACCCCCCCAATCCACCTCCATTTTTAACAACTTTAATTCCTCCCTCCTGCCTAACATGGCCGCCGCTCCTGCTTCAAAATTACTACCAAATATTTGCTTAACCCTTTTCCTTTCTCTAATTCTTCTCCTCCTTTTCTCTCTCATTTTAGCCTTCACTGTTTTCAAGCCCAAACAGCCTATCATCGTCGTCGATTCAGTTTCTCTGCTCGATCTAAACGTTTCTATAACCGACGGCGTCCATCTTAGTTTATCGCTCAATGTGGATCTAACCGTCCAGAATCCCAATAAAGTGGGCTTTGAATACTCTGAAAGCACGGCCGTTGTGATTTACAGAGGTGAAAAGGTGGGAGAAGCGCCGATTCCAGGTGGACGTTTACCGGGGAAAGGAACGGAGAAAATGAACCTAACGTTAACCATAATGGGGGACCGGATGCTGGGGAAGTCGGAGGTGTTTTCCGATGTGGTTTCGGGTCAACTTCCGATAAGTACCTTCGCTCGGTTACCTGGAAAAGTGAAGGTGATGAATGTTCTGAAGATTCATGTTGTGGCGTCGACGTCTTGTGATCTCATAATTGATGTTAAGAACGAAAGTTTTGGAGATCAACTATGCCAATACCGGACTACGCTTTGAGATCAATTTCAGTTAGGCTTAAAATTTGGTCCATAAAACTTTGCATCCAATGCATCTGTTTTTGGTCCTCATGTACAAATTCATCAACTCTTTA

mRNA sequence

ATGGCCGCCGCTCCTGCTTCAAAATTACTACCAAATATTTGCTTAACCCTTTTCCTTTCTCTAATTCTTCTCCTCCTTTTCTCTCTCATTTTAGCCTTCACTGTTTTCAAGCCCAAACAGCCTATCATCGTCGTCGATTCAGTTTCTCTGCTCGATCTAAACGTTTCTATAACCGACGGCGTCCATCTTAGTTTATCGCTCAATGTGGATCTAACCGTCCAGAATCCCAATAAAGTGGGCTTTGAATACTCTGAAAGCACGGCCGTTGTGATTTACAGAGGTGAAAAGGTGGGAGAAGCGCCGATTCCAGGTGGACGTTTACCGGGGAAAGGAACGGAGAAAATGAACCTAACGTTAACCATAATGGGGGACCGGATGCTGGGGAAGTCGGAGGTGTTTTCCGATGTGGTTTCGGGTCAACTTCCGATAAGTACCTTCGCTCGGTTACCTGGAAAAGTGAAGGTGATGAATGTTCTGAAGATTCATGTTGTGGCGTCGACGTCTTGTGATCTCATAATTGATGTTAAGAACGAAAGTTTTGGAGATCAACTATGCCAATACCGGACTACGCTTTGA

Coding sequence (CDS)

ATGGCCGCCGCTCCTGCTTCAAAATTACTACCAAATATTTGCTTAACCCTTTTCCTTTCTCTAATTCTTCTCCTCCTTTTCTCTCTCATTTTAGCCTTCACTGTTTTCAAGCCCAAACAGCCTATCATCGTCGTCGATTCAGTTTCTCTGCTCGATCTAAACGTTTCTATAACCGACGGCGTCCATCTTAGTTTATCGCTCAATGTGGATCTAACCGTCCAGAATCCCAATAAAGTGGGCTTTGAATACTCTGAAAGCACGGCCGTTGTGATTTACAGAGGTGAAAAGGTGGGAGAAGCGCCGATTCCAGGTGGACGTTTACCGGGGAAAGGAACGGAGAAAATGAACCTAACGTTAACCATAATGGGGGACCGGATGCTGGGGAAGTCGGAGGTGTTTTCCGATGTGGTTTCGGGTCAACTTCCGATAAGTACCTTCGCTCGGTTACCTGGAAAAGTGAAGGTGATGAATGTTCTGAAGATTCATGTTGTGGCGTCGACGTCTTGTGATCTCATAATTGATGTTAAGAACGAAAGTTTTGGAGATCAACTATGCCAATACCGGACTACGCTTTGA

Protein sequence

MAAAPASKLLPNICLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITDGVHLSLSLNVDLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLTIMGDRMLGKSEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESFGDQLCQYRTTL*
Homology
BLAST of CsaV3_6G019050 vs. NCBI nr
Match: XP_011658424.1 (uncharacterized protein LOC105435999 [Cucumis sativus] >KGN47220.1 hypothetical protein Csa_017024 [Cucumis sativus])

HSP 1 Score: 360.1 bits (923), Expect = 1.1e-95
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0

Query: 1   MAAAPASKLLPNICLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITDG 60
           MAAAPASKLLPNICLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITDG
Sbjct: 1   MAAAPASKLLPNICLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITDG 60

Query: 61  VHLSLSLNVDLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLT 120
           VHLSLSLNVDLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLT
Sbjct: 61  VHLSLSLNVDLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLT 120

Query: 121 IMGDRMLGKSEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESF 180
           IMGDRMLGKSEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESF
Sbjct: 121 IMGDRMLGKSEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESF 180

Query: 181 GDQLCQYRTTL 192
           GDQLCQYRTTL
Sbjct: 181 GDQLCQYRTTL 191

BLAST of CsaV3_6G019050 vs. NCBI nr
Match: KAA0033488.1 (putative Harpin-induced 1 [Cucumis melo var. makuwa] >TYK26841.1 putative Harpin-induced 1 [Cucumis melo var. makuwa])

HSP 1 Score: 302.0 bits (772), Expect = 3.7e-78
Identity = 158/187 (84.49%), Postives = 175/187 (93.58%), Query Frame = 0

Query: 3   AAPASKLLPNICLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITDGVH 62
           AAPASKLL N C+TL LSLILL++  L+LAFTVFKP++PIIVVDSVSLLDLNV++TDGV 
Sbjct: 9   AAPASKLLRNFCITLVLSLILLVVLVLVLAFTVFKPQRPIIVVDSVSLLDLNVALTDGVD 68

Query: 63  LSLSLNVDLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLTIM 122
           L+LS+NVDLTV+NPNKV FEYS+STAVVIYRGEKVGEAPIPGGRLPGKGT+KMNLTLTIM
Sbjct: 69  LNLSINVDLTVENPNKVAFEYSKSTAVVIYRGEKVGEAPIPGGRLPGKGTKKMNLTLTIM 128

Query: 123 GDRMLGKSEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESFGD 182
           G+RMLG+SEVFSDVVSGQL IST ARL GKVKVM V+KIHVVASTSCDLIIDVKN SFGD
Sbjct: 129 GERMLGRSEVFSDVVSGQLSISTLARLAGKVKVMGVVKIHVVASTSCDLIIDVKNGSFGD 188

Query: 183 QLCQYRT 190
           QLCQ+RT
Sbjct: 189 QLCQFRT 195

BLAST of CsaV3_6G019050 vs. NCBI nr
Match: XP_008465308.1 (PREDICTED: uncharacterized protein LOC103502964 [Cucumis melo])

HSP 1 Score: 302.0 bits (772), Expect = 3.7e-78
Identity = 158/187 (84.49%), Postives = 175/187 (93.58%), Query Frame = 0

Query: 3   AAPASKLLPNICLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITDGVH 62
           AAPASKLL N C+TL LSLILL++  L+LAFTVFKP++PIIVVDSVSLLDLNV++TDGV 
Sbjct: 2   AAPASKLLRNFCITLVLSLILLVVLVLVLAFTVFKPQRPIIVVDSVSLLDLNVALTDGVD 61

Query: 63  LSLSLNVDLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLTIM 122
           L+LS+NVDLTV+NPNKV FEYS+STAVVIYRGEKVGEAPIPGGRLPGKGT+KMNLTLTIM
Sbjct: 62  LNLSINVDLTVENPNKVAFEYSKSTAVVIYRGEKVGEAPIPGGRLPGKGTKKMNLTLTIM 121

Query: 123 GDRMLGKSEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESFGD 182
           G+RMLG+SEVFSDVVSGQL IST ARL GKVKVM V+KIHVVASTSCDLIIDVKN SFGD
Sbjct: 122 GERMLGRSEVFSDVVSGQLSISTLARLAGKVKVMGVVKIHVVASTSCDLIIDVKNGSFGD 181

Query: 183 QLCQYRT 190
           QLCQ+RT
Sbjct: 182 QLCQFRT 188

BLAST of CsaV3_6G019050 vs. NCBI nr
Match: XP_023534551.1 (uncharacterized protein LOC111796093 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.4 bits (581), Expect = 5.2e-56
Identity = 121/183 (66.12%), Postives = 148/183 (80.87%), Query Frame = 0

Query: 12  NICLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITD---GVHLSLSLN 71
           NIC+ + LSLILL++F LILAFTVFKPKQP I VDS+SLLDLN+S+     GV L+L+L 
Sbjct: 10  NICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLNAARFGVDLNLTLI 69

Query: 72  VDLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLTIMGDRMLG 131
           V LT++NPNKV F++S+ TAVV YRGE+V EAPIP GRL   GTEKMNLTLT+M DRML 
Sbjct: 70  VQLTLENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTLTMMADRMLA 129

Query: 132 KSEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESFGDQLCQYR 191
           KSE+FSDV++G+LPISTFARL GKV V+ V KI VVA +SCDL I+++N +  DQ C+YR
Sbjct: 130 KSELFSDVLTGELPISTFARLAGKVTVIGVFKIRVVALSSCDLTINIRNRNVEDQRCEYR 189

BLAST of CsaV3_6G019050 vs. NCBI nr
Match: XP_023007254.1 (uncharacterized protein LOC111499794 [Cucurbita maxima])

HSP 1 Score: 228.0 bits (580), Expect = 6.8e-56
Identity = 121/183 (66.12%), Postives = 147/183 (80.33%), Query Frame = 0

Query: 12  NICLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITD---GVHLSLSLN 71
           NIC+ + LSLI+L++  LILAFTVFKPKQP I VDSVSLLDLN+S+     GV L+L+L 
Sbjct: 10  NICIAVLLSLIVLVILILILAFTVFKPKQPTITVDSVSLLDLNISLNAARFGVDLNLTLI 69

Query: 72  VDLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLTIMGDRMLG 131
           V LTV+NPNKV F++S+ TAVV YRGE+V EAPIP GRL   GTEKMNLTLT+M DR+L 
Sbjct: 70  VQLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSPDGTEKMNLTLTMMADRLLA 129

Query: 132 KSEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESFGDQLCQYR 191
           KSE+FSDV++G+LPISTFARL GK+ V+ V KI VVA +SCDL ID++N S  DQ C+YR
Sbjct: 130 KSELFSDVIAGELPISTFARLAGKMTVIGVFKIRVVALSSCDLTIDIRNRSVEDQRCEYR 189

BLAST of CsaV3_6G019050 vs. ExPASy TrEMBL
Match: A0A0A0KBX8 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G212910 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.6e-96
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0

Query: 1   MAAAPASKLLPNICLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITDG 60
           MAAAPASKLLPNICLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITDG
Sbjct: 1   MAAAPASKLLPNICLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITDG 60

Query: 61  VHLSLSLNVDLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLT 120
           VHLSLSLNVDLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLT
Sbjct: 61  VHLSLSLNVDLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLT 120

Query: 121 IMGDRMLGKSEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESF 180
           IMGDRMLGKSEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESF
Sbjct: 121 IMGDRMLGKSEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESF 180

Query: 181 GDQLCQYRTTL 192
           GDQLCQYRTTL
Sbjct: 181 GDQLCQYRTTL 191

BLAST of CsaV3_6G019050 vs. ExPASy TrEMBL
Match: A0A5A7SSE6 (Putative Harpin-induced 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold260G00330 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.8e-78
Identity = 158/187 (84.49%), Postives = 175/187 (93.58%), Query Frame = 0

Query: 3   AAPASKLLPNICLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITDGVH 62
           AAPASKLL N C+TL LSLILL++  L+LAFTVFKP++PIIVVDSVSLLDLNV++TDGV 
Sbjct: 9   AAPASKLLRNFCITLVLSLILLVVLVLVLAFTVFKPQRPIIVVDSVSLLDLNVALTDGVD 68

Query: 63  LSLSLNVDLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLTIM 122
           L+LS+NVDLTV+NPNKV FEYS+STAVVIYRGEKVGEAPIPGGRLPGKGT+KMNLTLTIM
Sbjct: 69  LNLSINVDLTVENPNKVAFEYSKSTAVVIYRGEKVGEAPIPGGRLPGKGTKKMNLTLTIM 128

Query: 123 GDRMLGKSEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESFGD 182
           G+RMLG+SEVFSDVVSGQL IST ARL GKVKVM V+KIHVVASTSCDLIIDVKN SFGD
Sbjct: 129 GERMLGRSEVFSDVVSGQLSISTLARLAGKVKVMGVVKIHVVASTSCDLIIDVKNGSFGD 188

Query: 183 QLCQYRT 190
           QLCQ+RT
Sbjct: 189 QLCQFRT 195

BLAST of CsaV3_6G019050 vs. ExPASy TrEMBL
Match: A0A1S3CNL0 (uncharacterized protein LOC103502964 OS=Cucumis melo OX=3656 GN=LOC103502964 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.8e-78
Identity = 158/187 (84.49%), Postives = 175/187 (93.58%), Query Frame = 0

Query: 3   AAPASKLLPNICLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITDGVH 62
           AAPASKLL N C+TL LSLILL++  L+LAFTVFKP++PIIVVDSVSLLDLNV++TDGV 
Sbjct: 2   AAPASKLLRNFCITLVLSLILLVVLVLVLAFTVFKPQRPIIVVDSVSLLDLNVALTDGVD 61

Query: 63  LSLSLNVDLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLTIM 122
           L+LS+NVDLTV+NPNKV FEYS+STAVVIYRGEKVGEAPIPGGRLPGKGT+KMNLTLTIM
Sbjct: 62  LNLSINVDLTVENPNKVAFEYSKSTAVVIYRGEKVGEAPIPGGRLPGKGTKKMNLTLTIM 121

Query: 123 GDRMLGKSEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESFGD 182
           G+RMLG+SEVFSDVVSGQL IST ARL GKVKVM V+KIHVVASTSCDLIIDVKN SFGD
Sbjct: 122 GERMLGRSEVFSDVVSGQLSISTLARLAGKVKVMGVVKIHVVASTSCDLIIDVKNGSFGD 181

Query: 183 QLCQYRT 190
           QLCQ+RT
Sbjct: 182 QLCQFRT 188

BLAST of CsaV3_6G019050 vs. ExPASy TrEMBL
Match: A0A6J1L4F9 (uncharacterized protein LOC111499794 OS=Cucurbita maxima OX=3661 GN=LOC111499794 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 3.3e-56
Identity = 121/183 (66.12%), Postives = 147/183 (80.33%), Query Frame = 0

Query: 12  NICLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITD---GVHLSLSLN 71
           NIC+ + LSLI+L++  LILAFTVFKPKQP I VDSVSLLDLN+S+     GV L+L+L 
Sbjct: 10  NICIAVLLSLIVLVILILILAFTVFKPKQPTITVDSVSLLDLNISLNAARFGVDLNLTLI 69

Query: 72  VDLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLTIMGDRMLG 131
           V LTV+NPNKV F++S+ TAVV YRGE+V EAPIP GRL   GTEKMNLTLT+M DR+L 
Sbjct: 70  VQLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSPDGTEKMNLTLTMMADRLLA 129

Query: 132 KSEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESFGDQLCQYR 191
           KSE+FSDV++G+LPISTFARL GK+ V+ V KI VVA +SCDL ID++N S  DQ C+YR
Sbjct: 130 KSELFSDVIAGELPISTFARLAGKMTVIGVFKIRVVALSSCDLTIDIRNRSVEDQRCEYR 189

BLAST of CsaV3_6G019050 vs. ExPASy TrEMBL
Match: A0A6J1G8C1 (uncharacterized protein LOC111451800 OS=Cucurbita moschata OX=3662 GN=LOC111451800 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 4.8e-55
Identity = 120/183 (65.57%), Postives = 146/183 (79.78%), Query Frame = 0

Query: 12  NICLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITDG---VHLSLSLN 71
           NIC+ + LSLILL++F LILAFTVFKPKQP I VDS+SLLDLN+S+      V L+L+L 
Sbjct: 10  NICIAVLLSLILLVIFILILAFTVFKPKQPTITVDSLSLLDLNISLDAARFRVDLNLTLI 69

Query: 72  VDLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLTIMGDRMLG 131
           V LTV+NPNKV F++S+ TAVV YRGE+V EAPIP GRL   GTEKMNLTLT+M DR+L 
Sbjct: 70  VLLTVENPNKVAFQHSDGTAVVSYRGEEVAEAPIPSGRLSADGTEKMNLTLTMMADRLLA 129

Query: 132 KSEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESFGDQLCQYR 191
           KSE+ SDV++G+LPISTFARLPGKV V+ V KI VVA +SCDL ID++  +  DQ C+YR
Sbjct: 130 KSELLSDVLAGELPISTFARLPGKVMVIGVFKIRVVALSSCDLTIDIRKRNVEDQRCKYR 189

BLAST of CsaV3_6G019050 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 157.5 bits (397), Expect = 1.1e-38
Identity = 80/182 (43.96%), Postives = 129/182 (70.88%), Query Frame = 0

Query: 13  ICLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITD---GVHLSLSLNV 72
           IC T+ L ++L+ +  +ILAFT+FKPK+P   +DSV++  L  S+      V L+L+LNV
Sbjct: 55  ICFTILL-ILLIAIVIVILAFTLFKPKRPTTTIDSVTVDRLQASVNPLLLKVLLNLTLNV 114

Query: 73  DLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLTIMGDRMLGK 132
           DL+++NPN++GF Y  S+A++ YRG+ +GEAP+P  R+  + T  +N+TLT+M DR+L +
Sbjct: 115 DLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAARKTVPLNITLTLMADRLLSE 174

Query: 133 SEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESFGDQLCQYRT 192
           +++ SDV++G +P++TF ++ GKV V+ + KI V +S+SCDL I V + +   Q C+Y T
Sbjct: 175 TQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLSISVSDRNVTSQHCKYST 234

BLAST of CsaV3_6G019050 vs. TAIR 10
Match: AT2G46150.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 94.7 bits (234), Expect = 8.4e-20
Identity = 64/186 (34.41%), Postives = 112/186 (60.22%), Query Frame = 0

Query: 12  NICLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDL-NVSITDGVHL---SLSL 71
           +IC+T   + ++L    L L FTVF+ K PII ++ V +  L +V+ T+ V L   ++S+
Sbjct: 39  SICVT--ATSLILTTIVLTLVFTVFRVKDPIIKMNGVMVNGLDSVTGTNQVQLLGTNISM 98

Query: 72  NVDLTVQNPNKVGFEYSESTAVVIYRGEKVGEA-PIPGGRLPGKGTEKMNLTLTIMGDRM 131
            VD++V+NPN   F+YS +T  + Y+G  VGEA  +PG   P + T +MN+T+ IM DR+
Sbjct: 99  IVDVSVKNPNTASFKYSNTTTDIYYKGTLVGEAHGLPGKARPHR-TSRMNVTVDIMLDRI 158

Query: 132 LGKSEVFSDVV-SGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESFGDQLC 191
           L    +  ++  SG + + ++ R+ GKVK+M ++K HV    +C + +++  ++  D  C
Sbjct: 159 LSDPGLGREISRSGLVNVWSYTRVGGKVKIMGIVKKHVTVKMNCTMAVNITGQAIQDVDC 218

BLAST of CsaV3_6G019050 vs. TAIR 10
Match: AT3G05975.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 90.9 bits (224), Expect = 1.2e-18
Identity = 56/183 (30.60%), Postives = 102/183 (55.74%), Query Frame = 0

Query: 14  CLTLFLSLILLLLF--SLILAFTVFKPKQPII--VVDSVSLLDLNVSITDGVHLSLSLNV 73
           C+   +  +L ++F  +LILA  VFKPK PI+  V  +V  +  N+S+   V L+ +L +
Sbjct: 8   CIVSGIIFVLFVIFMTALILA-QVFKPKHPILQTVSSTVDGISTNISLPYEVQLNFTLTL 67

Query: 74  DLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLTIMGDRMLGK 133
           ++ ++NPN   FEY     +V YR   VG   +P   LP KG+  +   L +  D+ +  
Sbjct: 68  EMLLKNPNVADFEYKTVENLVYYRDTLVGNLTLPSSTLPAKGSVLLPCPLFLQLDKFVAN 127

Query: 134 -SEVFSDVVSGQLPISTFARLPGKVKVMNVLKIHVVASTSCDLIIDVKNESFGDQLCQYR 192
             ++  DV+ G++ + T A++PGK+ ++ + KI + + + C+L++   +    DQ+C  +
Sbjct: 128 LGDIVQDVLHGKIVMETRAKMPGKITLLGIFKIPLDSISHCNLVLGFPSMVVEDQVCDLK 187

BLAST of CsaV3_6G019050 vs. TAIR 10
Match: AT2G01080.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-09
Identity = 52/199 (26.13%), Postives = 97/199 (48.74%), Query Frame = 0

Query: 3   AAPASKLLPNICLTLFL---SLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITD 62
           ++ +S  L   C  LFL    L LL+L  +++     KPK+P   +  V+++ + +S   
Sbjct: 30  SSSSSASLKGCCCCLFLLFAFLALLVLAVVLIVILAVKPKKPQFDLQQVAVVYMGISNPS 89

Query: 63  GV------HLSLSLNVDLTVQNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTE 122
            V       LSL++ +  T  NPNKVG  Y ES+  V+Y+G  +G A +PG       T+
Sbjct: 90  AVLDPTTASLSLTIRMLFTAVNPNKVGIRYGESSFTVMYKGMPLGRATVPGFYQDAHSTK 149

Query: 123 KMNLTLTIMGDRMLGKSEVFSDVV-----SGQLPISTFARLPGKVKVMNVLKIHVVASTS 182
            +  T+++  DR+       +D+V     + ++ ++    +  K++VMN     V  S +
Sbjct: 150 NVEATISV--DRVNLMQAHAADLVRDASLNDRVELTVRGDVGAKIRVMNFDSPGVQVSVN 209

Query: 183 CDLIIDVKNESFGDQLCQY 188
           C + I  + ++   + C +
Sbjct: 210 CGIGISPRKQALIYKQCGF 226

BLAST of CsaV3_6G019050 vs. TAIR 10
Match: AT1G64450.1 (Glycine-rich protein family )

HSP 1 Score: 52.8 bits (125), Expect = 3.7e-07
Identity = 36/108 (33.33%), Postives = 59/108 (54.63%), Query Frame = 0

Query: 14  CLTLFLSLILLLLFSLILAFTVFKPKQPIIVVDSVSLLDLNVSITDGVHLSLSLNVDLTV 73
           C    + L++LL+  L++ FTVFKPK P I V++V L    VS       + S +  + V
Sbjct: 19  CAVATVFLLILLVVLLVVYFTVFKPKDPKISVNAVQLPSFAVSNNTA---NFSFSQYVAV 78

Query: 74  QNPNKVGFEYSESTAVVIYRGEKVGEAPIPGGRLPGKGTEKMNLTLTI 122
           +NPN+  F + +S+  ++Y G +VG   IP G++     + M  T T+
Sbjct: 79  RNPNRAVFSHYDSSIQLLYSGNQVGFMFIPAGKIDSGRIQYMAATFTV 123

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011658424.11.1e-95100.00uncharacterized protein LOC105435999 [Cucumis sativus] >KGN47220.1 hypothetical ... [more]
KAA0033488.13.7e-7884.49putative Harpin-induced 1 [Cucumis melo var. makuwa] >TYK26841.1 putative Harpin... [more]
XP_008465308.13.7e-7884.49PREDICTED: uncharacterized protein LOC103502964 [Cucumis melo][more]
XP_023534551.15.2e-5666.12uncharacterized protein LOC111796093 [Cucurbita pepo subsp. pepo][more]
XP_023007254.16.8e-5666.12uncharacterized protein LOC111499794 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KBX85.6e-96100.00LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G212910 PE=4 ... [more]
A0A5A7SSE61.8e-7884.49Putative Harpin-induced 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... [more]
A0A1S3CNL01.8e-7884.49uncharacterized protein LOC103502964 OS=Cucumis melo OX=3656 GN=LOC103502964 PE=... [more]
A0A6J1L4F93.3e-5666.12uncharacterized protein LOC111499794 OS=Cucurbita maxima OX=3661 GN=LOC111499794... [more]
A0A6J1G8C14.8e-5565.57uncharacterized protein LOC111451800 OS=Cucurbita moschata OX=3662 GN=LOC1114518... [more]
Match NameE-valueIdentityDescription
AT3G54200.11.1e-3843.96Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT2G46150.18.4e-2034.41Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT3G05975.11.2e-1830.60Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT2G01080.11.3e-0926.13Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [more]
AT1G64450.13.7e-0733.33Glycine-rich protein family [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.40.1820coord: 28..172
e-value: 1.2E-11
score: 46.6
NoneNo IPR availablePANTHERPTHR31852LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 10..189
NoneNo IPR availablePANTHERPTHR31852:SF122LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILYcoord: 10..189
NoneNo IPR availableSUPERFAMILY117070LEA14-likecoord: 23..126
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 71..157
e-value: 1.0E-11
score: 45.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G019050.1CsaV3_6G019050.1mRNA