Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAACTTTAGTGATGAAGAAGCTGGTGTTGAAAATGAAACCCCAAAGCAGATATGTAGACCACGAGGACCAACTATTATGTTCGATGTCACTCGCATTAGAAGTTTGGGAGAGAAGAAGGTGGTGATGTACAATGAAGACGGAGTACCCATTGGTGAGAATGGAGCAAAGTTGAAGTCTTTCATAGGATCTGCGACACATTATCATGTCCCGATCACATATTCATCGTGGAAAAGTGTGCCGGTAGAGCTGAAAGATAAAATATTCAGTACGGTTGAGGTATATATATAATTTCAATGTGCTTATATTGATAATGTTCATAATGTATACTTTATTAATCACTTTTAAATATTTAGGCCGCATTCGTCATTGATCCCAGATCGAGGAAAAATATTATCCAAACTGCTGGCATTTCGTTTCGTCAGTTTAAGTGTTGGCTAACAACAAAATATATTATGCCACATAAGGATGAACCACAACTCCTACAAGTTCCACCAGAAAAGTATTCATTCATTGATCAACATCATTGGACAGAATGTCTAGATTGTGTGAAACTTTTCAGGTATGTTACTTTCTCAATAACAAATATATTTGTAAAGTTTAGATTGCATGTTACTTTCTCACTAACAATATTTTTGAAAAATAGGAAAAAAGACTTCTCCAACAAGATAGACGATCTAAGAACAAGTATAACCATAGGATTTCGAGGAAGGGTTATGCCAATCTTATCGAGAAAATG
mRNA sequence
ATGGATAACTTTAGTGATGAAGAAGCTGGTGTTGAAAATGAAACCCCAAAGCAGATATGTAGACCACGAGGACCAACTATTATGTTCGATGTCACTCGCATTAGAAGTTTGGGAGAGAAGAAGGTGGTGATGTACAATGAAGACGGAGTACCCATTGGTGAGAATGGAGCAAAGTTGAAGTCTTTCATAGGATCTGCGACACATTATCATGTCCCGATCACATATTCATCGTGGAAAAGTGTGCCGGTAGAGCTGAAAGATAAAATATTCAGTACGGTTGAGGCCGCATTCGTCATTGATCCCAGATCGAGGAAAAATATTATCCAAACTGCTGGCATTTCGTTTCGTCAGTTTAAGTGTTGGCTAACAACAAAATATATTATGCCACATAAGGATGAACCACAACTCCTACAAGTTCCACCAGAAAAGTATTCATTCATTGATCAACATCATTGGACAGAATGTCTAGATTGTGTGAAACTTTTCAGGAAAAAAGACTTCTCCAACAAGATAGACGATCTAAGAACAAGTATAACCATAGGATTTCGAGGAAGGGTTATGCCAATCTTATCGAGAAAATG
Coding sequence (CDS)
ATGGATAACTTTAGTGATGAAGAAGCTGGTGTTGAAAATGAAACCCCAAAGCAGATATGTAGACCACGAGGACCAACTATTATGTTCGATGTCACTCGCATTAGAAGTTTGGGAGAGAAGAAGGTGGTGATGTACAATGAAGACGGAGTACCCATTGGTGAGAATGGAGCAAAGTTGAAGTCTTTCATAGGATCTGCGACACATTATCATGTCCCGATCACATATTCATCGTGGAAAAGTGTGCCGGTAGAGCTGAAAGATAAAATATTCAGTACGGTTGAGGCCGCATTCGTCATTGATCCCAGATCGAGGAAAAATATTATCCAAACTGCTGGCATTTCGTTTCGTCAGTTTAAGTGTTGGCTAACAACAAAATATATTATGCCACATAAGGATGAACCACAACTCCTACAAGTTCCACCAGAAAAGTATTCATTCATTGATCAACATCATTGGACAGAATGTCTAGATTGTGTGAAACTTTTCAGGAAAAAAGACTTCTCCAACAAGATAGACGATCTAAGAACAAGTATAACCATAGGATTTCGAGGAAGGGTTATGCCAATCTTATCGAGAAAATG
Protein sequence
MDNFSDEEAGVENETPKQICRPRGPTIMFDVTRIRSLGEKKVVMYNEDGVPIGENGAKLKSFIGSATHYHVPITYSSWKSVPVELKDKIFSTVEAAFVIDPRSRKNIIQTAGISFRQFKCWLTTKYIMPHKDEPQLLQVPPEKYSFIDQHHWTECLDCVKLFRKKDFSNKIDDLRTSITIGFRGRVMPILSRKX
Homology
BLAST of CsaV3_6G018640 vs. NCBI nr
Match:
KAE8646994.1 (hypothetical protein Csa_016979, partial [Cucumis sativus])
HSP 1 Score: 404.8 bits (1039), Expect = 4.1e-109
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
Query: 1 MDNFSDEEAGVENETPKQICRPRGPTIMFDVTRIRSLGEKKVVMYNEDGVPIGENGAKLK 60
MDNFSDEEAGVENETPKQICRPRGPTIMFDVTRIRSLGEKKVVMYNEDGVPIGENGAKLK
Sbjct: 1 MDNFSDEEAGVENETPKQICRPRGPTIMFDVTRIRSLGEKKVVMYNEDGVPIGENGAKLK 60
Query: 61 SFIGSATHYHVPITYSSWKSVPVELKDKIFSTVEAAFVIDPRSRKNIIQTAGISFRQFKC 120
SFIGSATHYHVPITYSSWKSVPVELKDKIFSTVEAAFVIDPRSRKNIIQTAGISFRQFKC
Sbjct: 61 SFIGSATHYHVPITYSSWKSVPVELKDKIFSTVEAAFVIDPRSRKNIIQTAGISFRQFKC 120
Query: 121 WLTTKYIMPHKDEPQLLQVPPEKYSFIDQHHWTECLDCVKLFRKKDFSNKIDDLRTSITI 180
WLTTKYIMPHKDEPQLLQVPPEKYSFIDQHHWTECLDCVKLFRKKDFSNKIDDLRTSITI
Sbjct: 121 WLTTKYIMPHKDEPQLLQVPPEKYSFIDQHHWTECLDCVKLFRKKDFSNKIDDLRTSITI 180
Query: 181 GFRGRVMPILSRK 194
GFRGRVMPILSRK
Sbjct: 181 GFRGRVMPILSRK 193
BLAST of CsaV3_6G018640 vs. NCBI nr
Match:
KAA0057689.1 (hypothetical protein E6C27_scaffold126G00400 [Cucumis melo var. makuwa] >TYK27474.1 hypothetical protein E5676_scaffold970G00270 [Cucumis melo var. makuwa])
HSP 1 Score: 275.8 bits (704), Expect = 2.9e-70
Identity = 135/184 (73.37%), Postives = 152/184 (82.61%), Query Frame = 0
Query: 3 NFSDEEAGVENETPKQICRPRGPTIMFDVTRIRSLGEKKVVMYNEDGVPIGENGAKLKSF 62
N + E+ NETPK++ + RGPTIMFDVT IRSLG+KKVV YNED PIGENGAKLKSF
Sbjct: 284 NTTVEDIDTRNETPKKLKQRRGPTIMFDVTHIRSLGDKKVVRYNEDRAPIGENGAKLKSF 343
Query: 63 IGSATHYHVPITYSSWKSVPVELKDKIFSTVEAAFVIDPRSRKNIIQTAGISFRQFKCWL 122
IGSATHYHV ITY+SWKSVP ELKDKIF+TV+AAFVIDPRSRKN++QTAGISFR FK WL
Sbjct: 344 IGSATHYHVSITYTSWKSVPAELKDKIFTTVDAAFVIDPRSRKNVLQTAGISFRHFKNWL 403
Query: 123 TTKYIMPHKDEPQLLQVPPEKYSFIDQHHWTECLDCVKLFRKKDFSNKIDDLRTSITIGF 182
TTKYIMPHKDEPQLLQVPPEKY FI+Q+HW E + RKKD NKIDD RT+ I
Sbjct: 404 TTKYIMPHKDEPQLLQVPPEKYFFIEQNHWEEFVRS----RKKDNYNKIDDRRTNTIIES 463
Query: 183 RGRV 187
+G+V
Sbjct: 464 QGKV 463
BLAST of CsaV3_6G018640 vs. NCBI nr
Match:
KAA0060814.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])
HSP 1 Score: 268.5 bits (685), Expect = 4.6e-68
Identity = 131/160 (81.88%), Postives = 141/160 (88.12%), Query Frame = 0
Query: 1 MDNFSDEEAGV------ENETPKQICRPRGPTIMFDVTRIRSLGEKKVVMYNEDGVPIGE 60
MDN +EE GV ETPK++ R RGPTIMFDVTRIRSLG+KKVV YNEDG PIGE
Sbjct: 1 MDNL-NEEVGVGELNATVEETPKELKRRRGPTIMFDVTRIRSLGDKKVVRYNEDGAPIGE 60
Query: 61 NGAKLKSFIGSATHYHVPITYSSWKSVPVELKDKIFSTVEAAFVIDPRSRKNIIQTAGIS 120
NGAKLKSFIGSATHYHVPITY SWKSVP ELKDKIF+TVEAAFVIDPRSRKN++QTAGIS
Sbjct: 61 NGAKLKSFIGSATHYHVPITYMSWKSVPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGIS 120
Query: 121 FRQFKCWLTTKYIMPHKDEPQLLQVPPEKYSFIDQHHWTE 155
FRQFK WLTTKYI+PHKDEPQLLQVPPEKYSFI+Q+HW E
Sbjct: 121 FRQFKNWLTTKYIIPHKDEPQLLQVPPEKYSFIEQNHWEE 159
BLAST of CsaV3_6G018640 vs. NCBI nr
Match:
TYK01338.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])
HSP 1 Score: 266.2 bits (679), Expect = 2.3e-67
Identity = 128/155 (82.58%), Postives = 138/155 (89.03%), Query Frame = 0
Query: 6 DEEAGV------ENETPKQICRPRGPTIMFDVTRIRSLGEKKVVMYNEDGVPIGENGAKL 65
+EE GV ETPK++ R RGPTIMFDVTRIRSLG+KKVV YNEDG PIGENGAKL
Sbjct: 5 NEEVGVGELNATVEETPKELKRRRGPTIMFDVTRIRSLGDKKVVRYNEDGAPIGENGAKL 64
Query: 66 KSFIGSATHYHVPITYSSWKSVPVELKDKIFSTVEAAFVIDPRSRKNIIQTAGISFRQFK 125
KSFIGSATHYHVPITY SWKSVP ELKDKIF+TVEAAFVIDPRSRKN++QTAGISFRQFK
Sbjct: 65 KSFIGSATHYHVPITYMSWKSVPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFK 124
Query: 126 CWLTTKYIMPHKDEPQLLQVPPEKYSFIDQHHWTE 155
WLTTKYI+PHKDEPQLLQVPPEKYSFI+Q+HW E
Sbjct: 125 NWLTTKYIIPHKDEPQLLQVPPEKYSFIEQNHWEE 159
BLAST of CsaV3_6G018640 vs. NCBI nr
Match:
TYK24336.1 (putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa] >TYK24781.1 putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa])
HSP 1 Score: 266.2 bits (679), Expect = 2.3e-67
Identity = 128/155 (82.58%), Postives = 138/155 (89.03%), Query Frame = 0
Query: 6 DEEAGV------ENETPKQICRPRGPTIMFDVTRIRSLGEKKVVMYNEDGVPIGENGAKL 65
+EE GV ETPK++ R RGPTIMFDVTRIRSLG+KKVV YNEDG PIGENGAKL
Sbjct: 5 NEEVGVGELNATVEETPKELKRRRGPTIMFDVTRIRSLGDKKVVRYNEDGAPIGENGAKL 64
Query: 66 KSFIGSATHYHVPITYSSWKSVPVELKDKIFSTVEAAFVIDPRSRKNIIQTAGISFRQFK 125
KSFIGSATHYHVPITY SWKSVP ELKDKIF+TVEAAFVIDPRSRKN++QTAGISFRQFK
Sbjct: 65 KSFIGSATHYHVPITYMSWKSVPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFK 124
Query: 126 CWLTTKYIMPHKDEPQLLQVPPEKYSFIDQHHWTE 155
WLTTKYI+PHKDEPQLLQVPPEKYSFI+Q+HW E
Sbjct: 125 NWLTTKYIIPHKDEPQLLQVPPEKYSFIEQNHWEE 159
BLAST of CsaV3_6G018640 vs. ExPASy TrEMBL
Match:
A0A5D3DVE3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold970G00270 PE=4 SV=1)
HSP 1 Score: 275.8 bits (704), Expect = 1.4e-70
Identity = 135/184 (73.37%), Postives = 152/184 (82.61%), Query Frame = 0
Query: 3 NFSDEEAGVENETPKQICRPRGPTIMFDVTRIRSLGEKKVVMYNEDGVPIGENGAKLKSF 62
N + E+ NETPK++ + RGPTIMFDVT IRSLG+KKVV YNED PIGENGAKLKSF
Sbjct: 284 NTTVEDIDTRNETPKKLKQRRGPTIMFDVTHIRSLGDKKVVRYNEDRAPIGENGAKLKSF 343
Query: 63 IGSATHYHVPITYSSWKSVPVELKDKIFSTVEAAFVIDPRSRKNIIQTAGISFRQFKCWL 122
IGSATHYHV ITY+SWKSVP ELKDKIF+TV+AAFVIDPRSRKN++QTAGISFR FK WL
Sbjct: 344 IGSATHYHVSITYTSWKSVPAELKDKIFTTVDAAFVIDPRSRKNVLQTAGISFRHFKNWL 403
Query: 123 TTKYIMPHKDEPQLLQVPPEKYSFIDQHHWTECLDCVKLFRKKDFSNKIDDLRTSITIGF 182
TTKYIMPHKDEPQLLQVPPEKY FI+Q+HW E + RKKD NKIDD RT+ I
Sbjct: 404 TTKYIMPHKDEPQLLQVPPEKYFFIEQNHWEEFVRS----RKKDNYNKIDDRRTNTIIES 463
Query: 183 RGRV 187
+G+V
Sbjct: 464 QGKV 463
BLAST of CsaV3_6G018640 vs. ExPASy TrEMBL
Match:
A0A5A7V0G8 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00370 PE=3 SV=1)
HSP 1 Score: 268.5 bits (685), Expect = 2.2e-68
Identity = 131/160 (81.88%), Postives = 141/160 (88.12%), Query Frame = 0
Query: 1 MDNFSDEEAGV------ENETPKQICRPRGPTIMFDVTRIRSLGEKKVVMYNEDGVPIGE 60
MDN +EE GV ETPK++ R RGPTIMFDVTRIRSLG+KKVV YNEDG PIGE
Sbjct: 1 MDNL-NEEVGVGELNATVEETPKELKRRRGPTIMFDVTRIRSLGDKKVVRYNEDGAPIGE 60
Query: 61 NGAKLKSFIGSATHYHVPITYSSWKSVPVELKDKIFSTVEAAFVIDPRSRKNIIQTAGIS 120
NGAKLKSFIGSATHYHVPITY SWKSVP ELKDKIF+TVEAAFVIDPRSRKN++QTAGIS
Sbjct: 61 NGAKLKSFIGSATHYHVPITYMSWKSVPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGIS 120
Query: 121 FRQFKCWLTTKYIMPHKDEPQLLQVPPEKYSFIDQHHWTE 155
FRQFK WLTTKYI+PHKDEPQLLQVPPEKYSFI+Q+HW E
Sbjct: 121 FRQFKNWLTTKYIIPHKDEPQLLQVPPEKYSFIEQNHWEE 159
BLAST of CsaV3_6G018640 vs. ExPASy TrEMBL
Match:
A0A5D3DME5 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00220 PE=3 SV=1)
HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67
Identity = 128/155 (82.58%), Postives = 138/155 (89.03%), Query Frame = 0
Query: 6 DEEAGV------ENETPKQICRPRGPTIMFDVTRIRSLGEKKVVMYNEDGVPIGENGAKL 65
+EE GV ETPK++ R RGPTIMFDVTRIRSLG+KKVV YNEDG PIGENGAKL
Sbjct: 5 NEEVGVGELNATVEETPKELKRRRGPTIMFDVTRIRSLGDKKVVRYNEDGAPIGENGAKL 64
Query: 66 KSFIGSATHYHVPITYSSWKSVPVELKDKIFSTVEAAFVIDPRSRKNIIQTAGISFRQFK 125
KSFIGSATHYHVPITY SWKSVP ELKDKIF+TVEAAFVIDPRSRKN++QTAGISFRQFK
Sbjct: 65 KSFIGSATHYHVPITYMSWKSVPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFK 124
Query: 126 CWLTTKYIMPHKDEPQLLQVPPEKYSFIDQHHWTE 155
WLTTKYI+PHKDEPQLLQVPPEKYSFI+Q+HW E
Sbjct: 125 NWLTTKYIIPHKDEPQLLQVPPEKYSFIEQNHWEE 159
BLAST of CsaV3_6G018640 vs. ExPASy TrEMBL
Match:
A0A5D3C8G8 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00550 PE=3 SV=1)
HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67
Identity = 128/155 (82.58%), Postives = 138/155 (89.03%), Query Frame = 0
Query: 6 DEEAGV------ENETPKQICRPRGPTIMFDVTRIRSLGEKKVVMYNEDGVPIGENGAKL 65
+EE GV ETPK++ R RGPTIMFDVTRIRSLG+KKVV YNEDG PIGENGAKL
Sbjct: 5 NEEVGVGELNATVEETPKELKRRRGPTIMFDVTRIRSLGDKKVVRYNEDGAPIGENGAKL 64
Query: 66 KSFIGSATHYHVPITYSSWKSVPVELKDKIFSTVEAAFVIDPRSRKNIIQTAGISFRQFK 125
KSFIGSATHYHVPITY SWKSVP ELKDKIF+TVEAAFVIDPRSRKN++QTAGISFRQFK
Sbjct: 65 KSFIGSATHYHVPITYMSWKSVPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFK 124
Query: 126 CWLTTKYIMPHKDEPQLLQVPPEKYSFIDQHHWTE 155
WLTTKYI+PHKDEPQLLQVPPEKYSFI+Q+HW E
Sbjct: 125 NWLTTKYIIPHKDEPQLLQVPPEKYSFIEQNHWEE 159
BLAST of CsaV3_6G018640 vs. ExPASy TrEMBL
Match:
A0A5D3BQQ2 (Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00170 PE=3 SV=1)
HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67
Identity = 128/155 (82.58%), Postives = 138/155 (89.03%), Query Frame = 0
Query: 6 DEEAGV------ENETPKQICRPRGPTIMFDVTRIRSLGEKKVVMYNEDGVPIGENGAKL 65
+EE GV ETPK++ R RGPTIMFDVTRIRSLG+KKVV YNEDG PIGENGAKL
Sbjct: 5 NEEVGVGELNATVEETPKELKRRRGPTIMFDVTRIRSLGDKKVVRYNEDGAPIGENGAKL 64
Query: 66 KSFIGSATHYHVPITYSSWKSVPVELKDKIFSTVEAAFVIDPRSRKNIIQTAGISFRQFK 125
KSFIGSATHYHVPITY SWKSVP ELKDKIF+TVEAAFVIDPRSRKN++QTAGISFRQFK
Sbjct: 65 KSFIGSATHYHVPITYMSWKSVPAELKDKIFTTVEAAFVIDPRSRKNVLQTAGISFRQFK 124
Query: 126 CWLTTKYIMPHKDEPQLLQVPPEKYSFIDQHHWTE 155
WLTTKYI+PHKDEPQLLQVPPEKYSFI+Q+HW E
Sbjct: 125 NWLTTKYIIPHKDEPQLLQVPPEKYSFIEQNHWEE 159
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAE8646994.1 | 4.1e-109 | 100.00 | hypothetical protein Csa_016979, partial [Cucumis sativus] | [more] |
KAA0057689.1 | 2.9e-70 | 73.37 | hypothetical protein E6C27_scaffold126G00400 [Cucumis melo var. makuwa] >TYK2747... | [more] |
KAA0060814.1 | 4.6e-68 | 81.88 | putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa] | [more] |
TYK01338.1 | 2.3e-67 | 82.58 | putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa] | [more] |
TYK24336.1 | 2.3e-67 | 82.58 | putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa] >TYK247... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3DVE3 | 1.4e-70 | 73.37 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7V0G8 | 2.2e-68 | 81.88 | Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5D3DME5 | 1.1e-67 | 82.58 | Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5D3C8G8 | 1.1e-67 | 82.58 | Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5D3BQQ2 | 1.1e-67 | 82.58 | Putative serine/threonine-protein kinase nek2 OS=Cucumis melo var. makuwa OX=119... | [more] |
Match Name | E-value | Identity | Description | |