CsaV3_6G018540 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G018540
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Ribosomal protein L34e superfamily protein
Location	chr6: 13120550 .. 13125700 (-)
RNA-Seq Expression	CsaV3_6G018540
Synteny	CsaV3_6G018540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATGTTAAGGGATGATTAAATAGAAGCTTCTCCCTCTTTTGGTATATGAAGAAATGAGAGCTTATATATGAAAAGCACAACAGTGATACTTATAATGTAGAAGTGACAAGTGCAACATCCATTTTTCTTTTACAAATTGGTAAGTCCAACTATCTTACTATGGCAACATTTATTTTGCTAATTAGTGGTCAATCTGATTTAAGGTGTCATTTTAAACATGTTTTCAAAATCTCAAGAACTAAAAGTATTTTTTAAAAAACTTTAAAGATAAAATAAACATCCATAAAAATAGTACAGGTTAGTTGAGTTATATTGGATTCAAGGTCACTGTTTATATTTAAAAAATGGTTTCATGAATGAAATAATTAGGAAACAAACAAAGTGTCAGGAAGAAGTTAAAAAGATTATCTATAAATCACAATTAATTTTTTGAAAAAATCAAATAAATATCTTTGTACATTTACATTAACTTTCTTTTAAAAGAATCATTAATTAATTTGGTATCACGTGAAACGCTCATAAACTCAACAGTCATTTAAACTTAATTTCATCAACTTTAACCGGAAACGAATAACAATTAAATTAAATTATTTATTTTCTAAAAAACAAAATCTGAAAAACTATAAATACTAAATAATATATTGCGTTTTCTTAGCCACTCTCTGCCGTGGCGCGTGTGAGATCATCAATCAGACGGTTCACAATCGCCGGTCCGTCACCACCACTTCGCTAACGTACGCCATTCTTCTTCTTCTTCTTCATCAATCTTCCCTCTCTCTCAAATCCCTTTTCTTTTTTACAGTCAGATCCCTAAAATTTGCCCTAATTTTGAACTCCATTTTTGCAAAGCTCTCCACTGGGCTTTCTCTATAACATGCGCAATCTTCTGGTTCCGACCACCGCCATGCCTCCGTCCTCAATTCTCTCATCATCGTCGTCAATTTCCAAATCCAAGACTTCAACAAACCCTAGCCCTAGCAATTCTCTTCTCTGTAAACACTCTCCATCCGCAACCCTCGACCTTCTTATCCTCATTCTCGTTTTGTTTTCTGGTACTTTCCTTGTAACCTCATATTTCTCTTACATTTTCAACTCTTTGTCGATTCTCTTGTCGCATTCCGCCCCCCAGCTTCCTCAATTTCCGTTTACGTTTATTGCTGGATTTTTGTTGTTCTTTTGTGTCACTATTGGTGTGTTTGAGATTTGTTGTGGGGCTAGATCGAGGAAATGCGCTAAGCCGGGATGTAAAGGGTTGAAAAAAGCTATGGAGTTCGATCTGCAATTGCAAACGGAGGAGTGTGTAAAGAGTGGGTCGAAGGAGATTGATAAATTGCCGTGGAAGGGAGGTAGTGAGGCCAACCCGGATTATGAGTGTTTGAGGTCTGAGCTGAGGAAGATGGCACCACCCAATGGCCGAGCTGTTCTGCTTTTCCGGGCGCGCTGTGGCTGCCCCATCGCGAAGCTTGAAGGCTGGGGGACTAAGCGCGGGCGGCGGCATAAGAAGTGAGTTCGTTTCTTATTTGTTTTTTGCTCTGATCGTTCAATGGCTTGAGCTCTTTCGTTGTCTGTTCTTAATTCTAGAATTGGGTTTTGCTCTTCTGAAATTATCACGATCCACTTCTCCCTAGCAAAACCCCAAAACTAAAAAGCAGATGATGAAGGAAAAGGGTGTATCTGGATTTAGATATCATTTGTTTAAATCCCTGTTGCATCCATGAAACCTTTGACCAACCGTAGTATCTAGCTTATGTCGGAATTGGGGAGAAATTCCTTCCCCTGTTTAACATTGTGGTTGGTAGATAATTTTTATCAACAATTTTGTGGGAGGTGGGATTATGGAAGAGGAAGACTATCTTATTTCAGTTTGGCTAAATCAGAATCTATTGTACATGTTCCCCATTAAATCGTGTTGATTTTTCAAAAAGATAATAGTAATAAGTTTATTAGATCAACTCTCGTTTTCAGAGATAAGGTACGCTTTTTTATGTTGAAACCAATTCTGCAGCTATCCTTGCATCTTGGACTCATATATGATACTGTTTCTTTTCTTGTACCTTTACCCCTTTCTTCATGGAATTATAACCAAAGCCTCAAGACCAGAGACTCAAATTAGATGCTCAAAATTTGATCTGTTACATTTTTCTTGTTGAAAATTACAGATGTTAAACTCCAAATAATGTGATCGATGTGGGTAATGAGAGGGATTTGAAGGTCTGGATTGAATTGGTTTAGATTTTAATTAGACTCACTTGCTCTGCTTTTATTTTTTTTTTTGAGCTCATTTGGTAAATTCATACTATTTTCTCTTTTCCACTTTATGGCATCCCTTGAGGATGATGAATTGGCTTTGTGTGTCTAGTCTTGGGCAAATTGTAGAGTTTATTTTAACTTACATTGTAGCGTGTTCGTCCTGGTGCAATCTTTATCATTAAAATTTTTTTGGTAGGTTCTATATTCATTAACATTAAGAATCTAAAATTACTACCCGGAAAGAAGATTCACGACTAGTCATGGAGGCTTTTTTTTACTTTTTCTCGTTTGTTTCCCTTGTGTGGATCTCTTCTTTGTCATTTATTATTAATTAATATTATTTAGCATCTTGTTTCATGTTTTGATCTACTGAAGGGTTTACTTTCTCCCTTTCTTTTTACCCGTTTTAAATGTTGTTAATTCTCTTCATTCTTGGGTCCACTCTTCAAGTTAGTTAATTTATTTTTCAGTGGGAAGCTATGCAAGCAAGTTTCAGGGGCTCGGTTAGCATACCCTAAGTAATTTGTTTCTGGTGAGCAATTATTGACTAGGTTTAAGCAATGTTGTTCTGTTATCCTAGCTATAAGTTATTAAATATTTTGTATGCATTGTGTTCAGCTCTACTTGATACTGAATTTACTTAATGTTGCCAACTTTACCCAATTTTTTTAATTTTTAGTCATATATAATAGGCCATATCTTGACCTATATCTGAAAGAGTATATATCTTTATTTCTTAAGTAACTTTGATTTGTTTTTTTTTAATTGTTTGAACATCATCATCACTAAACTTCAACATCATGAAAAAAAAAAAACAAGAGAACACTCCTCTCAAAAGGACCATAAAAGAAGAGTCTTCAAATATGGAGTGGGTCTAGCCTCTAATTACAAATTAATTTTGTGGAGTGGAGAAGAGTTTCTTTGGCTTGCCGGCCTGTGTGGAGTGTTGTGGGTTTTGTGGGATGAGAGAAATAGTAGGGTGTTTAGGAGAGTGGAAGAGGGATCCTAGTGAGCTTTGGTCCCTTGTTCGTTTCCATGTTTCTCTATAGGCTTTGATTTCGAAGACCTTTTGTAGTTATTCTTTAGGAATGATTTTCCATGGTTGGGGCCTCTTCTTGTAACCAGTGTCTCTCTTTTTTGTGGGCTTGGTTTTTTGTATGTCCGTGTTTTCTTTTCATTTTTTCCTCAATGAAAGTGGTTCTTTTCATTTTTAAAAAACTACAAAAGAATTTTGAGAAAGCACCTTCATGAGGAAGTTAGCTGTGCACAAATCTGCTATCAAAACCCTTTTTCCTTCCCTTCCCTTTGGAATCTCTCCTACCTCACAGTTCCACAAAACTTTAATGTTGCCTTCAAACCTCCACCGTACCCTGACTTCCAAAAGCTAATGGAACTAATTTGGATTATTATTTGATCCCCACACAATGATGAGCTTTATTTTGTTTCAGCAAGAACCATACGAATTTTGAATTTCTTGTCTATATGTTACCAAATAATCAACCTCGTGCACAAAACAACTAGAAACCTATTAATTGGTTATTACAAACCTGTTCAACATGAGTTGTCATTCGAGATTCATCATAGATGTTTCAATAAAAACATATACTTCAATACTTTGTTAACAATTTTATGAAAATGCATAATCAAGTCCAGTCTTGTCATGTATTTTTGCACCTAGCGTCAGAAAAATCAAGAATGTCATCCTGACCTTTCTCGTCCTTTGCTGTTCTATATATGCATGTAGGCTTTCTTTCTTGAAAACCTAATAAGATCATTTAGTATGTGGCTGTATTTTGGATACTTGACAAGGGCATGACCTTCATCCTATTTTACTTCACTGGTTTCAGTTTCACAAAAAACGTGGAAGCATGAACACTGTAATATTACTTGCAGGATCTATAGATTGGTTGTTTTGTCCTAATATCCTGTTTATCCCATGTGGGCAAATGAATTGGGAATTCAATGTATCCCGATTCCTTGCGTGATACTTACTAGCATGTAGTGAGCAAACCTGAACCCAAATCAATTTCTGTGTGAAGTTAGATGAGCTTCAAGTTCTTGCTAGAAAGCAAATAATAGGGATTTCTTCTGTTCTTGTCTAAGTCAACCATTCAAAATTTGAAACATGTTTGTTGAGTTATTTGGCAAGATTTTAGAAGTTGCTTCCCTTAAAAATTGTCAGCACTTGATGATATATACTTATAGGGTTAGGGATGATTTCGGCGGACTCAAAACCTAGTTTAGAACAGAACCAAAATTTTCAGTCCTGGAAAGCAAGATTCTCAAACTATTGTGGAGTGTGTGTAACATTTAGTCCATATGAAGATTTTGGATTTCTATTTCTGATGAACTGGGGAAGCTGTGTAGTACGTTTTACATTTACTATGAAGATCGTCTTCATATTGCATACTCTGTTTCGATCATTACAATTGTACTTGCAGCAGACTTCATTAGGATAGGCGAACATGATCTCACTAATGAACACAATCTCATTCACATCACTGATTCTTGCAGGGCTCTGGCTACACTGGGTCTTAATGGGGGAAGAGACCATCACTGATTGAAGATGGCGACTTCGTTATCAAGCAGATCTTCCAGATACTTTACTATCTCTTCCCATCATTTTACTTAAACTTAGATGCTCTTTCTGAAACATATGGATGGCTAGAGCTTTCTTCTATAAGAATATACTATAACACAGTGATATTCATTGTCAGAAACAGGCTTCCCCCATCCCTGCATTATCCTGGGAGATTCTTCCCTCCCCTTGGAAATGGAAATGGAAATGGAAATATATACCAAACTTACTGCAAATAAAATGATTAGACAATTATAATTATGTCTCCTGGTCCATCTTTAAGTGTGATAAGATCTTTAACTTTTGGTATTTCCCTCCCC

mRNA sequence

ATGCGCAATCTTCTGGTTCCGACCACCGCCATGCCTCCGTCCTCAATTCTCTCATCATCGTCGTCAATTTCCAAATCCAAGACTTCAACAAACCCTAGCCCTAGCAATTCTCTTCTCTGTAAACACTCTCCATCCGCAACCCTCGACCTTCTTATCCTCATTCTCGTTTTGTTTTCTGGTACTTTCCTTGTAACCTCATATTTCTCTTACATTTTCAACTCTTTGTCGATTCTCTTGTCGCATTCCGCCCCCCAGCTTCCTCAATTTCCGTTTACGTTTATTGCTGGATTTTTGTTGTTCTTTTGTGTCACTATTGGTGTGTTTGAGATTTGTTGTGGGGCTAGATCGAGGAAATGCGCTAAGCCGGGATGTAAAGGGTTGAAAAAAGCTATGGAGTTCGATCTGCAATTGCAAACGGAGGAGTGTGTAAAGAGTGGGTCGAAGGAGATTGATAAATTGCCGTGGAAGGGAGGTAGTGAGGCCAACCCGGATTATGAGTGTTTGAGGTCTGAGCTGAGGAAGATGGCACCACCCAATGGCCGAGCTGTTCTGCTTTTCCGGGCGCGCTGTGGCTGCCCCATCGCGAAGCTTGAAGGCTGGGGGACTAAGCGCGGGCGGCGGCATAAGAATGGGAAGCTATGCAAGCAAGTTTCAGGGGCTCGGTTAGCATACCCTAAGTAA

Coding sequence (CDS)

ATGCGCAATCTTCTGGTTCCGACCACCGCCATGCCTCCGTCCTCAATTCTCTCATCATCGTCGTCAATTTCCAAATCCAAGACTTCAACAAACCCTAGCCCTAGCAATTCTCTTCTCTGTAAACACTCTCCATCCGCAACCCTCGACCTTCTTATCCTCATTCTCGTTTTGTTTTCTGGTACTTTCCTTGTAACCTCATATTTCTCTTACATTTTCAACTCTTTGTCGATTCTCTTGTCGCATTCCGCCCCCCAGCTTCCTCAATTTCCGTTTACGTTTATTGCTGGATTTTTGTTGTTCTTTTGTGTCACTATTGGTGTGTTTGAGATTTGTTGTGGGGCTAGATCGAGGAAATGCGCTAAGCCGGGATGTAAAGGGTTGAAAAAAGCTATGGAGTTCGATCTGCAATTGCAAACGGAGGAGTGTGTAAAGAGTGGGTCGAAGGAGATTGATAAATTGCCGTGGAAGGGAGGTAGTGAGGCCAACCCGGATTATGAGTGTTTGAGGTCTGAGCTGAGGAAGATGGCACCACCCAATGGCCGAGCTGTTCTGCTTTTCCGGGCGCGCTGTGGCTGCCCCATCGCGAAGCTTGAAGGCTGGGGGACTAAGCGCGGGCGGCGGCATAAGAATGGGAAGCTATGCAAGCAAGTTTCAGGGGCTCGGTTAGCATACCCTAAGTAA

Protein sequence

MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYPK*

Homology

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BLAST of CsaV3_6G018540 vs. NCBI nr
Match: XP_011657202.1 (uncharacterized protein At5g19025 isoform X1 [Cucumis sativus] >KGN47264.1 hypothetical protein Csa_016991 [Cucumis sativus])

HSP 1 Score: 446.0 bits (1146), Expect = 1.9e-121
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYPK 227
           RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYPK
Sbjct: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYPK 226

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BLAST of CsaV3_6G018540 vs. NCBI nr
Match: XP_008458549.1 (PREDICTED: uncharacterized protein At5g19025 isoform X1 [Cucumis melo])

HSP 1 Score: 441.0 bits (1133), Expect = 6.0e-120
Identity = 224/226 (99.12%), Postives = 224/226 (99.12%), Query Frame = 0


Query: 1   MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFC TIGVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYPK 227
           RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAY K
Sbjct: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYTK 226

[Close]

BLAST of CsaV3_6G018540 vs. NCBI nr
Match: XP_038876270.1 (uncharacterized protein At5g19025-like isoform X1 [Benincasa hispida])

HSP 1 Score: 437.2 bits (1123), Expect = 8.7e-119
Identity = 221/226 (97.79%), Postives = 222/226 (98.23%), Query Frame = 0


Query: 1   MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSIL+SSSSISKSKTSTNPSPSNS LCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILTSSSSISKSKTSTNPSPSNSFLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLSHSAPQLPQFPF FIA FLLFFCVTIGVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFPFIAAFLLFFCVTIGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYPK 227
           RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARL YPK
Sbjct: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLTYPK 226

[Close]

BLAST of CsaV3_6G018540 vs. NCBI nr
Match: XP_022138323.1 (uncharacterized protein At5g19025-like isoform X1 [Momordica charantia])

HSP 1 Score: 427.2 bits (1097), Expect = 9.0e-116
Identity = 218/228 (95.61%), Postives = 221/228 (96.93%), Query Frame = 0


Query: 1   MRNLLVPTT--AMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLF 60
           MRNLLVPTT  AMPP+SIL+SSSSISKSKTS NPSPSNSLLCKHSPSATLDLLILILVLF
Sbjct: 1   MRNLLVPTTAAAMPPTSILASSSSISKSKTSANPSPSNSLLCKHSPSATLDLLILILVLF 60

Query: 61  SGTFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRK 120
           SGTFLVTSYFSYIFNSLS+L SHSAPQLPQFPF FI GFLLFFCVTIGVFEICCGARSRK
Sbjct: 61  SGTFLVTSYFSYIFNSLSLLFSHSAPQLPQFPFPFIVGFLLFFCVTIGVFEICCGARSRK 120

Query: 121 CAKPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPP 180
           CAKPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPP
Sbjct: 121 CAKPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPP 180

Query: 181 NGRAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYPK 227
           NGRAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAY K
Sbjct: 181 NGRAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYHK 228

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BLAST of CsaV3_6G018540 vs. NCBI nr
Match: KAG7013591.1 (hypothetical protein SDJN02_23758 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 427.2 bits (1097), Expect = 9.0e-116
Identity = 215/225 (95.56%), Postives = 219/225 (97.33%), Query Frame = 0


Query: 1   MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSILSSSSSI KSKTS NP+PSNSLLCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILSSSSSIPKSKTSANPNPSNSLLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLSHSAPQ PQFPF FIAGFLLFFCVTIG+FEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSHSAPQRPQFPFPFIAGFLLFFCVTIGMFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVK+GSKEIDKLPWKGG+ ANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKNGSKEIDKLPWKGGNVANPDYECLRSELRKMAPPNG 180

Query: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYP 226
           RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSG RLAYP
Sbjct: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGTRLAYP 225

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BLAST of CsaV3_6G018540 vs. ExPASy Swiss-Prot
Match: P0C8Q9 (Uncharacterized protein At5g19025 OS=Arabidopsis thaliana OX=3702 GN=At5g19025 PE=2 SV=3)

HSP 1 Score: 251.1 bits (640), Expect = 1.2e-65
Identity = 142/245 (57.96%), Postives = 166/245 (67.76%), Query Frame = 0


Query: 8   TTAMPPSSILSSSSSISKSKTSTNPSPSNSL-LCKHSPSATLDLLILILVLFSGTFLVTS 67
           +T MPPS           S+++ N + S+SL LCKHSPSATLDLLILILVLFSGTFL++S
Sbjct: 21  STTMPPS-----------SRSAANQNSSSSLHLCKHSPSATLDLLILILVLFSGTFLLSS 80

Query: 68  YFSYIFNSLSILLSH----------SAPQLPQF---------------------PFTFIA 127
           YFSY+ +SLS+L SH            P L  F                     P +F  
Sbjct: 81  YFSYLIHSLSLLSSHFPSITISLSSLLPPLIIFFSSDHSTEDEDHHHPSGKIPPPASFFF 140

Query: 128 GFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKAMEFDLQLQTEECVKSGS-KEIDKLP 187
            F +FF  +I   ++CCG+RSRKC  P CKG+KKAMEFDLQLQTEECVKSGS KEID+LP
Sbjct: 141 AFAVFFAASIAFLDLCCGSRSRKCRNPKCKGMKKAMEFDLQLQTEECVKSGSVKEIDRLP 200

Query: 188 WKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLC 220
           WKGGSE+NPDYECLR+ELRKMAP NGRAVL+FR++CGCPIAKLEGWG KR RRHK     
Sbjct: 201 WKGGSESNPDYECLRAELRKMAPVNGRAVLIFRSKCGCPIAKLEGWGPKRSRRHKKSPAK 254

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BLAST of CsaV3_6G018540 vs. ExPASy TrEMBL
Match: A0A0A0KEK4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G238650 PE=4 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 9.1e-122
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYPK 227
           RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYPK
Sbjct: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYPK 226

[Close]

BLAST of CsaV3_6G018540 vs. ExPASy TrEMBL
Match: A0A1S3C841 (uncharacterized protein At5g19025 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497920 PE=4 SV=1)

HSP 1 Score: 441.0 bits (1133), Expect = 2.9e-120
Identity = 224/226 (99.12%), Postives = 224/226 (99.12%), Query Frame = 0


Query: 1   MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFC TIGVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCFTIGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYPK 227
           RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAY K
Sbjct: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYTK 226

[Close]

BLAST of CsaV3_6G018540 vs. ExPASy TrEMBL
Match: A0A6J1CCQ3 (uncharacterized protein At5g19025-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009538 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 4.4e-116
Identity = 218/228 (95.61%), Postives = 221/228 (96.93%), Query Frame = 0


Query: 1   MRNLLVPTT--AMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLF 60
           MRNLLVPTT  AMPP+SIL+SSSSISKSKTS NPSPSNSLLCKHSPSATLDLLILILVLF
Sbjct: 1   MRNLLVPTTAAAMPPTSILASSSSISKSKTSANPSPSNSLLCKHSPSATLDLLILILVLF 60

Query: 61  SGTFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRK 120
           SGTFLVTSYFSYIFNSLS+L SHSAPQLPQFPF FI GFLLFFCVTIGVFEICCGARSRK
Sbjct: 61  SGTFLVTSYFSYIFNSLSLLFSHSAPQLPQFPFPFIVGFLLFFCVTIGVFEICCGARSRK 120

Query: 121 CAKPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPP 180
           CAKPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPP
Sbjct: 121 CAKPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPP 180

Query: 181 NGRAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYPK 227
           NGRAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAY K
Sbjct: 181 NGRAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYHK 228

[Close]

BLAST of CsaV3_6G018540 vs. ExPASy TrEMBL
Match: A0A6J1ER23 (uncharacterized protein At5g19025-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436777 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.8e-114
Identity = 213/226 (94.25%), Postives = 218/226 (96.46%), Query Frame = 0


Query: 1   MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSIL+SSSSISKSKT  NPSPSNSLLCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCA 120
           TFLVTSYFSYIFNSLSILLS+SA QLPQFPF FI GFLLFFCV +GVFEICCGARSRKCA
Sbjct: 61  TFLVTSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVK GSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYPK 227
           RA+LLFRARCGCPIAKLEGWGTKRGRRHKNGKLCK+VSGA LAYPK
Sbjct: 181 RAILLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKKVSGAWLAYPK 226

[Close]

BLAST of CsaV3_6G018540 vs. ExPASy TrEMBL
Match: A0A6J1KI58 (uncharacterized protein At5g19025-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494167 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.6e-113
Identity = 212/226 (93.81%), Postives = 217/226 (96.02%), Query Frame = 0


Query: 1   MRNLLVPTTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSG 60
           MRNLLVPTTAMPPSSIL+SSSSISKSKT  NPSPSNSLLCKHSPSATLDLLILILVLFSG
Sbjct: 1   MRNLLVPTTAMPPSSILTSSSSISKSKTCANPSPSNSLLCKHSPSATLDLLILILVLFSG 60

Query: 61  TFLVTSYFSYIFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCA 120
           TFLV SYFSYIFNSLSILLS+SA QLPQFPF FI GFLLFFCV +GVFEICCGARSRKCA
Sbjct: 61  TFLVKSYFSYIFNSLSILLSYSALQLPQFPFPFIVGFLLFFCVIVGVFEICCGARSRKCA 120

Query: 121 KPGCKGLKKAMEFDLQLQTEECVKSGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180
           KPGCKGLKKAMEFDLQLQTEECVK GSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG
Sbjct: 121 KPGCKGLKKAMEFDLQLQTEECVKGGSKEIDKLPWKGGSEANPDYECLRSELRKMAPPNG 180

Query: 181 RAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKQVSGARLAYPK 227
           RA+LLFRARCGCPIAKLEGWGTKRGRRHKNGKLCK+VSGARLAY K
Sbjct: 181 RAILLFRARCGCPIAKLEGWGTKRGRRHKNGKLCKKVSGARLAYLK 226

[Close]

BLAST of CsaV3_6G018540 vs. TAIR 10
Match: AT3G06180.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 265.8 bits (678), Expect = 3.2e-71
Identity = 142/218 (65.14%), Postives = 167/218 (76.61%), Query Frame = 0


Query: 8   TTAMPPSSILSSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSY 67
           T +MPPSS  S+S S S   +S++ S S+  LCKHSPSATLDLLILILVLFSG FL++SY
Sbjct: 15  TNSMPPSS--SASRSASNHSSSSSSSSSSLHLCKHSPSATLDLLILILVLFSGAFLLSSY 74

Query: 68  FSYIFNSLSILLSHSAPQLPQF------------PFTFIAGFLLFFCVTIGVFEICCGAR 127
           FSY+F+S S+L SH  P L               P ++   F +FF  +I   ++CCG R
Sbjct: 75  FSYLFHSFSLLSSH-FPSLSSLIFSDDEDLSSIPPASYFFAFAVFFAASIAFLDLCCGPR 134

Query: 128 SRKCAKPGCKGLKKAMEFDLQLQTEECVKSG-SKEIDKLPWKGGSEANPDYECLRSELRK 187
           SRKC  P CKGLKKAMEFDLQLQTEECVKSG +KEID+LPWKGGSE+NPDYECLR+ELR+
Sbjct: 135 SRKCRNPKCKGLKKAMEFDLQLQTEECVKSGATKEIDRLPWKGGSESNPDYECLRAELRR 194

Query: 188 MAPPNGRAVLLFRARCGCPIAKLEGWGTKRGRRHKNGK 213
           MAPPNGRAVLLFR+RCGCP+AKLEGWG KRGRRHK  +
Sbjct: 195 MAPPNGRAVLLFRSRCGCPVAKLEGWGPKRGRRHKKSQ 229

[Close]

BLAST of CsaV3_6G018540 vs. TAIR 10
Match: AT5G19025.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 251.1 bits (640), Expect = 8.3e-67
Identity = 142/245 (57.96%), Postives = 166/245 (67.76%), Query Frame = 0


Query: 8   TTAMPPSSILSSSSSISKSKTSTNPSPSNSL-LCKHSPSATLDLLILILVLFSGTFLVTS 67
           +T MPPS           S+++ N + S+SL LCKHSPSATLDLLILILVLFSGTFL++S
Sbjct: 21  STTMPPS-----------SRSAANQNSSSSLHLCKHSPSATLDLLILILVLFSGTFLLSS 80

Query: 68  YFSYIFNSLSILLSH----------SAPQLPQF---------------------PFTFIA 127
           YFSY+ +SLS+L SH            P L  F                     P +F  
Sbjct: 81  YFSYLIHSLSLLSSHFPSITISLSSLLPPLIIFFSSDHSTEDEDHHHPSGKIPPPASFFF 140

Query: 128 GFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKAMEFDLQLQTEECVKSGS-KEIDKLP 187
            F +FF  +I   ++CCG+RSRKC  P CKG+KKAMEFDLQLQTEECVKSGS KEID+LP
Sbjct: 141 AFAVFFAASIAFLDLCCGSRSRKCRNPKCKGMKKAMEFDLQLQTEECVKSGSVKEIDRLP 200

Query: 188 WKGGSEANPDYECLRSELRKMAPPNGRAVLLFRARCGCPIAKLEGWGTKRGRRHKNGKLC 220
           WKGGSE+NPDYECLR+ELRKMAP NGRAVL+FR++CGCPIAKLEGWG KR RRHK     
Sbjct: 201 WKGGSESNPDYECLRAELRKMAPVNGRAVLIFRSKCGCPIAKLEGWGPKRSRRHKKSPAK 254

[Close]

BLAST of CsaV3_6G018540 vs. TAIR 10
Match: AT3G01170.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 4.2e-26
Identity = 78/199 (39.20%), Postives = 117/199 (58.79%), Query Frame = 0


Query: 18  SSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSYI------ 77
           S  S  +++K+S++P+ S   +C  S SA +D++ILI V+ +  FL   Y   I      
Sbjct: 23  SPKSRNTRNKSSSSPTCSKFPVCDGSQSAAIDVVILIAVITACGFLFFPYVKLITLKSIE 82

Query: 78  -FNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSRKCAKPGCKGLKKA 137
            F+ LS+L+     ++ Q P  + +  L  FC  I  + +      ++C KP CKGL+KA
Sbjct: 83  VFSDLSLLVKQ---EILQNPIVYGSLALSIFCAAISTWLVILLCTMQRCGKPNCKGLRKA 142

Query: 138 MEFDLQLQTEECVKSGSKE--IDKLPWKGGSEANPDYECLRSELRKMAPPNGRAVLLFRA 197
           +EFD+QL+TEECVKS S +  + +LP          +  L +EL+KMAPPNGRAVL+FRA
Sbjct: 143 VEFDIQLETEECVKSSSNKRGMFELP-------RVHHRELEAELKKMAPPNGRAVLVFRA 202

Query: 198 RCGCPIAKLEGWGTKRGRR 208
           RCGC + +L   G K+ +R
Sbjct: 203 RCGCSVRRLVVSGPKKQQR 211

[Close]

BLAST of CsaV3_6G018540 vs. TAIR 10
Match: AT5G15260.1 (Ribosomal protein L34e superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 3.0e-24
Identity = 81/199 (40.70%), Postives = 116/199 (58.29%), Query Frame = 0


Query: 18  SSSSSISKSKTSTNPSPSNSLLCKHSPSATLDLLILILVLFSGTFLVTSYFSY------- 77
           S +SS ++  +S++ S + S+ C  S SA +D++ILI V+ S  FL+  Y  +       
Sbjct: 30  SRTSSSNRKSSSSSCSSNFSVCCDGSRSAAIDVVILIAVITSSGFLIFPYIKFITIKSVE 89

Query: 78  IFNSLSILLSHSAPQLPQFPFTFIAGFLLFFCVTIGVFEICCGARSR-KCAKPGCKGLKK 137
           IF+ LS L+     + P  P  +    L   C  +  + I     SR +C KP CKGL+K
Sbjct: 90  IFSELSCLVKEEILRNPD-PIVYGLIALSISCTALSAWMIVILLCSRHRCGKPNCKGLRK 149

Query: 138 A-MEFDLQLQTEECVKSGS--KEIDKLPWKGGSEANPDYEC-LRSELRKMAPPNGRAVLL 197
           A  EFD+QL+TE+CVKS +  K + K   KG  E   D+   L +EL+KMAPPNGRAVL+
Sbjct: 150 ANAEFDIQLETEDCVKSSNSGKSVSK---KGLFELPRDHHRELEAELKKMAPPNGRAVLV 209

Query: 198 FRARCGCPIAKLEGWGTKR 205
           FRA+CGC + +LE  G K+
Sbjct: 210 FRAKCGCSVGRLEVPGPKK 224

The following BLAST results are available for this feature:

BLAST of CsaV3_6G018540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657202.1	1.9e-121	100.00	uncharacterized protein At5g19025 isoform X1 [Cucumis sativus] >KGN47264.1 hypot...	[more]
XP_008458549.1	6.0e-120	99.12	PREDICTED: uncharacterized protein At5g19025 isoform X1 [Cucumis melo]	[more]
XP_038876270.1	8.7e-119	97.79	uncharacterized protein At5g19025-like isoform X1 [Benincasa hispida]	[more]
XP_022138323.1	9.0e-116	95.61	uncharacterized protein At5g19025-like isoform X1 [Momordica charantia]	[more]
KAG7013591.1	9.0e-116	95.56	hypothetical protein SDJN02_23758 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CsaV3_6G018540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0C8Q9	1.2e-65	57.96	Uncharacterized protein At5g19025 OS=Arabidopsis thaliana OX=3702 GN=At5g19025 P...	[more]

BLAST of CsaV3_6G018540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEK4	9.1e-122	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G238650 PE=4 SV=1	[more]
A0A1S3C841	2.9e-120	99.12	uncharacterized protein At5g19025 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10349...	[more]
A0A6J1CCQ3	4.4e-116	95.61	uncharacterized protein At5g19025-like isoform X1 OS=Momordica charantia OX=3673...	[more]
A0A6J1ER23	1.8e-114	94.25	uncharacterized protein At5g19025-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1KI58	1.6e-113	93.81	uncharacterized protein At5g19025-like isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of CsaV3_6G018540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06180.1	3.2e-71	65.14	Ribosomal protein L34e superfamily protein	[more]
AT5G19025.1	8.3e-67	57.96	Ribosomal protein L34e superfamily protein	[more]
AT3G01170.1	4.2e-26	39.20	Ribosomal protein L34e superfamily protein	[more]
AT5G15260.1	3.0e-24	40.70	Ribosomal protein L34e superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..38
None	No IPR available	PANTHER	PTHR47479:SF2	OS05G0393200 PROTEIN	coord: 1..217
IPR044196	Uncharacterized protein At5g19025-like	PANTHER	PTHR47479	OS05G0393200 PROTEIN	coord: 1..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G018540.1	CsaV3_6G018540.1	mRNA