CsaV3_6G016560 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G016560
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Ras-related protein Rab2BV
Location	chr6: 12402437 .. 12405878 (+)
RNA-Seq Expression	CsaV3_6G016560
Synteny	CsaV3_6G016560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCTATTAAATGGGATTATTGATATTGGAAATGAATATGAAATCCGAAACGGCGTCGGTTGGATGTCGACGCGAACGGGCCACATAAGCATTGGGGGAGGAGGCAGCCCAAATGCGCTGGCTTCTCCAAGCGCAAAATCTCAACTCCCTTCCACTCACGACAACATAAAAGATTCCTCCAGCCCCGCACCACGTCGTCGTTTCCCATCCAATATTTATTCTCCAATTTTCATAACAATAACAATAACAATGACATAACCTAATATAAATAAATAAATTACAACAATTTCTCCTCCACTTTTTTTGTTACCATAGCTTCACAGTAAATTATGTGTATTGCTATTTTTATTTTGTAGGTTAAAAGGTTAAAATTTCCATTAATTACTTTTTACTGCAGTTTCAAGGTAGTAAATTTAAACTGATATAATGTTTTTCAAGTGTGGGTTTTGTCTAAAATTCTAAACCAGGGTAATATTGTAGATTCTAAAGGAATGGATGTAATTAATGATTGTGTAATAAATTTATATATTTTTTTTAACCTTCCGACTTGGAATATTCCACTTGAATTGAGTTTTACATTAAACGAAAATTTAAAAAATATATAATGATTGAGCGGTCAACATTTTAGTATAAAATATTTTCAATATTTTATTGGTGCGGTATTTGAACATTTAGATAAATAGGAACCTAAAATGTTTTCAAAAGTTATTTAAGAATGAGTAAAATAGACTGTTATTTAAAAAAATCAGTCACTAAATTCCTATAATACAAGAATGAAAAATTAAACTTCTAACTTCATATTTTACTATATAAATTAAATTATATATCACTTAAAATAATTGAATGAAAGTATATAAAGTAAATTTATTAGTTTAGAAGTATAAAAGGGTCACAATCATATTGTAACAAGCATTTATAATAACAAATGAATGGGTTTTGAATTTACCGTTGTTTGTGAGTGCATAGCCTCGTCCTTTTCTTTTTTCTCACAGTAAATGAGATGAAAATCAAAGCCCCAACGTCAAGAAAAATAGTAAAATTTACCCATCAAAGATTGAGTGTGAGTTTGTAACCACGAGCGGTTAGTTTTTGTAAGTTACATGAGAATTTATTTAGAACAAAAACATAATTTAAAAAGCTTCCTTAAAAGGAAAAATGAAAAAAGATCTAAAAAGCGTAAGGACTAAGCTGTAATTTCACACAAAATAAAAAGAATCTCCGTATTTATTAAAAATTTCAATTATTATTATTTTTTATCCTCCACCACCTTTTTCGCTCGCACTTTCCATTCAGCCGTGTAAACAAGCAACGTCAAACTCGCCTCAGACGACAACTCCACCAATCCTCTCTCTGTTCTCTCCCTAACTTCCCTCTTTAATTCTCTCTGCTTAATTCAATCCTTCGATTCTTCCGCCGCCGTCGCCGCCGTAGTCAACTTTCTTTCCCCACCAAGCCAATCTCAAACTCATCCTCCCATTTCTTCGCCTACAGGTCTCAATTCTCCCCTCTCATTTCTCAATTTGGGGATTCTCTTCCTCCTCAAACGTTTCTGTTTCCGCTACTGTAGATGATTCCGATTCTTTCAATTTTGTTTACTGAATTGCTGAATTTGATGTTTTTGGATCAGGTTTGTTCGAGAAATCTGGGGCGGAGACTGCTATGGCTCATAAGGTAGACCACGAGTATGACTATTTGTTCAAGATTGTTCTGATTGGGGATTCTGGCGTTGGGAAGTCCAACATTCTTTCGAGATTTACTAGAAACGAGTTCTGCTTGGAGTCCAAATCTACCATTGGTGTTGAGTTCTCGACCAAGACTCTCCAGGTAGAAAGCTTAATCGTTTGAACTCTCCGCGATTAAATTAGTATTTTTCAGTTTATTGATTGATCGTGTTATTTGCCGTCTGTGATTGATGGACTTCATGAATCTAGGTTCCGATGGTTTTGAAATTGTGGGTTCCGCCTTGCTTTTTAGTTTTTTTATGTTTTTTACTTTCGATCGTTAAAGTGCAGTGGATTTATTGCATGTAGGGTTTGAGTAAAGGTTTGAAGTAGTTGCGTCATTGCTTGAAGTTGAGGCTACCAACGTTTAGGATTGAATGAATAGGAACAGGATTTATGGAATTTAAATAATATGTTGCTGATCTAACAAGCAAACGATCCGGCTTTCCTGGCTATGTTTAACGAAAGACTGAGAGAATTATTCTGAAATATAGTTGTGAGTTGTTAAAGCAGTAGGAAATTGGCAGTCCTTTTCTCTTGTTTCTAGATTACTCTTATTTTCTTACCAAAATATAGAACACTCTTGAAATTTTGCAAGTGCTCATGTTCTTAAAATTTCGAGTGTTTTCACTAATGAAAAGTTAAGTATTATAAATGATTGTTCTCTATTAACTGATTTAAATGTAGATAAAACAAAAAGGTGCTTATGAAAAATTAGGGTATGGAATAATGTGAACCCAACTCAACAATAATTGACATATACTATTTCTTTTGATGTTGGATGTTCAAATCACTGTATCCCACATTTATTGTATAGAAAAAGGAAGAAAATTTTGGGTATGCCCATCCTACTATGACCAAACCGATTGATATTGGCTGAGTGATGGCTATTTTTCTTTTTTTGTGAAAAGTTATTAGTCAATGGAGCAAAAGATTGAGAAGGGAGATAATAGAGGTTTCCAACTAAAACTATCCAATTATGTATGGAAGCATATACACTCTGAATCCATTCCCTCTGTTTCTTGTTAGTTGTTTGTCCTAAAACCAAAATTACGTTCAAAAGAAATTATACATGGAAGGTTAACGAGATGGAGAGTTGCCTTCATTGGACAATATCACTAAATTGGGCCGTATTATTCAGTTTGGGATTACTTTCCATTTCAGAGTTCTGTACTTTTAGTAGTTGAAGTGTTAGCCATCTCATTTTAATCAATATTGTTGACATACAGGTAGAAGGAAAGACAGTCAAGGCACAGATCTGGGACACAGCAGGTCAGGAGCGATACCGTGCTATTACTAGTGCTTATTATAGAGGAGCCGTTGGTGCTCTCCTTGTCTATGATCTGACAAAGAGACAGACTTTCGAGAACGTTCAAAGGTGGCTTCGGGAGTTGAGAGATCATGCAGATTCTAACATTGTGATTGTGATGATTGGAAACAAATCTGACCTAAGTCATCTTAGATCTGTCTCAGAGGATGATGGGCAGACCATGGCAGAGAAGGAAGGTCTTTCATTTATCGAGACATCGGCCTTAGATGCCACCAACATCGACAAGGCATTCCAAACCATCTTGACAGAGATCTACCATATCATCAGCAAGAAGGCATTGGCAGCCCAGGAAGCAGCTGCCAGCATCACCCATCCCGGACAAGGAACGACCATCAACGTTTCCGATACTTCTGGTGACTCAAACAGAAGGGGTTGTTGTTCTTCTTGA

mRNA sequence

ATGCTTCTATTAAATGGGATTATTGATATTGGAAATGAATATGAAATCCGAAACGGCGTCGGTTGGATGTCGACGCGAACGGGCCACATAAGCATTGGGGGAGGAGGCAGCCCAAATGCGCTGGCTTCTCCAAGCGCAAAATCTCAACTCCCTTCCACTCACGACAACATAAAAGATTCCTCCAGCCCCGCACCACACGACAACTCCACCAATCCTCTCTCTGTTCTCTCCCTAACTTCCCTCTTTAATTCTCTCTGCTTAATTCAATCCTTCGATTCTTCCGCCGCCGTCGCCGCCGTAGTCAACTTTCTTTCCCCACCAAGCCAATCTCAAACTCATCCTCCCATTTCTTCGCCTACAGGTTTGTTCGAGAAATCTGGGGCGGAGACTGCTATGGCTCATAAGGTAGACCACGAGTATGACTATTTGTTCAAGATTGTTCTGATTGGGGATTCTGGCGTTGGGAAGTCCAACATTCTTTCGAGATTTACTAGAAACGAGTTCTGCTTGGAGTCCAAATCTACCATTGGTGTTGAGTTCTCGACCAAGACTCTCCAGTCAATGGAGCAAAAGATTGAGAAGGGAGATAATAGAGGTTTCCAACTAAAACTATCCAATTATGTAGAAGGAAAGACAGTCAAGGCACAGATCTGGGACACAGCAGGTCAGGAGCGATACCGTGCTATTACTAGTGCTTATTATAGAGGAGCCGTTGGTGCTCTCCTTGTCTATGATCTGACAAAGAGACAGACTTTCGAGAACGTTCAAAGGTGGCTTCGGGAGTTGAGAGATCATGCAGATTCTAACATTGTGATTGTGATGATTGGAAACAAATCTGACCTAAGTCATCTTAGATCTGTCTCAGAGGATGATGGGCAGACCATGGCAGAGAAGGAAGGTCTTTCATTTATCGAGACATCGGCCTTAGATGCCACCAACATCGACAAGGCATTCCAAACCATCTTGACAGAGATCTACCATATCATCAGCAAGAAGGCATTGGCAGCCCAGGAAGCAGCTGCCAGCATCACCCATCCCGGACAAGGAACGACCATCAACGTTTCCGATACTTCTGGTGACTCAAACAGAAGGGGTTGTTGTTCTTCTTGA

Coding sequence (CDS)

ATGCTTCTATTAAATGGGATTATTGATATTGGAAATGAATATGAAATCCGAAACGGCGTCGGTTGGATGTCGACGCGAACGGGCCACATAAGCATTGGGGGAGGAGGCAGCCCAAATGCGCTGGCTTCTCCAAGCGCAAAATCTCAACTCCCTTCCACTCACGACAACATAAAAGATTCCTCCAGCCCCGCACCACACGACAACTCCACCAATCCTCTCTCTGTTCTCTCCCTAACTTCCCTCTTTAATTCTCTCTGCTTAATTCAATCCTTCGATTCTTCCGCCGCCGTCGCCGCCGTAGTCAACTTTCTTTCCCCACCAAGCCAATCTCAAACTCATCCTCCCATTTCTTCGCCTACAGGTTTGTTCGAGAAATCTGGGGCGGAGACTGCTATGGCTCATAAGGTAGACCACGAGTATGACTATTTGTTCAAGATTGTTCTGATTGGGGATTCTGGCGTTGGGAAGTCCAACATTCTTTCGAGATTTACTAGAAACGAGTTCTGCTTGGAGTCCAAATCTACCATTGGTGTTGAGTTCTCGACCAAGACTCTCCAGTCAATGGAGCAAAAGATTGAGAAGGGAGATAATAGAGGTTTCCAACTAAAACTATCCAATTATGTAGAAGGAAAGACAGTCAAGGCACAGATCTGGGACACAGCAGGTCAGGAGCGATACCGTGCTATTACTAGTGCTTATTATAGAGGAGCCGTTGGTGCTCTCCTTGTCTATGATCTGACAAAGAGACAGACTTTCGAGAACGTTCAAAGGTGGCTTCGGGAGTTGAGAGATCATGCAGATTCTAACATTGTGATTGTGATGATTGGAAACAAATCTGACCTAAGTCATCTTAGATCTGTCTCAGAGGATGATGGGCAGACCATGGCAGAGAAGGAAGGTCTTTCATTTATCGAGACATCGGCCTTAGATGCCACCAACATCGACAAGGCATTCCAAACCATCTTGACAGAGATCTACCATATCATCAGCAAGAAGGCATTGGCAGCCCAGGAAGCAGCTGCCAGCATCACCCATCCCGGACAAGGAACGACCATCAACGTTTCCGATACTTCTGGTGACTCAAACAGAAGGGGTTGTTGTTCTTCTTGA

Protein sequence

MLLLNGIIDIGNEYEIRNGVGWMSTRTGHISIGGGGSPNALASPSAKSQLPSTHDNIKDSSSPAPHDNSTNPLSVLSLTSLFNSLCLIQSFDSSAAVAAVVNFLSPPSQSQTHPPISSPTGLFEKSGAETAMAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQSMEQKIEKGDNRGFQLKLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS*

Homology

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BLAST of CsaV3_6G016560 vs. NCBI nr
Match: KGN47145.2 (hypothetical protein Csa_020843 [Cucumis sativus])

HSP 1 Score: 714.9 bits (1844), Expect = 3.5e-202
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0


Query: 1   MLLLNGIIDIGNEYEIRNGVGWMSTRTGHISIGGGGSPNALASPSAKSQLPSTHDNIKDS 60
           MLLLNGIIDIGNEYEIRNGVGWMSTRTGHISIGGGGSPNALASPSAKSQLPSTHDNIKDS
Sbjct: 1   MLLLNGIIDIGNEYEIRNGVGWMSTRTGHISIGGGGSPNALASPSAKSQLPSTHDNIKDS 60

Query: 61  SSPAPHDNSTNPLSVLSLTSLFNSLCLIQSFDSSAAVAAVVNFLSPPSQSQTHPPISSPT 120
           SSPAPHDNSTNPLSVLSLTSLFNSLCLIQSFDSSAAVAAVVNFLSPPSQSQTHPPISSPT
Sbjct: 61  SSPAPHDNSTNPLSVLSLTSLFNSLCLIQSFDSSAAVAAVVNFLSPPSQSQTHPPISSPT 120

Query: 121 GLFEKSGAETAMAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF 180
           GLFEKSGAETAMAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF
Sbjct: 121 GLFEKSGAETAMAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF 180

Query: 181 STKTLQSMEQKIEKGDNRGFQLKLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGA 240
           STKTLQSMEQKIEKGDNRGFQLKLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGA
Sbjct: 181 STKTLQSMEQKIEKGDNRGFQLKLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGA 240

Query: 241 LLVYDLTKRQTFENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEG 300
           LLVYDLTKRQTFENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEG
Sbjct: 241 LLVYDLTKRQTFENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEG 300

Query: 301 LSFIETSALDATNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGD 360
           LSFIETSALDATNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGD
Sbjct: 301 LSFIETSALDATNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGD 360

Query: 361 SNRRGCCSS 370
           SNRRGCCSS
Sbjct: 361 SNRRGCCSS 369

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BLAST of CsaV3_6G016560 vs. NCBI nr
Match: TYK15391.1 (ras-related protein Rab2BV [Cucumis melo var. makuwa])

HSP 1 Score: 470.7 bits (1210), Expect = 1.2e-128
Identity = 263/347 (75.79%), Postives = 265/347 (76.37%), Query Frame = 0


Query: 23  MSTRTGHISIGGGGSPNALASPSAKSQLPSTHDNIKDSSSPAPHDNSTNPLSVLSLTSLF 82
           MST   H SI GGGSPNALASPSAKSQLPSTH+NIKDSSSP+P                 
Sbjct: 1   MSTPRVHRSISGGGSPNALASPSAKSQLPSTHNNIKDSSSPSPRRR-------------- 60

Query: 83  NSLCLIQSFDSSAAVAAVVNFLSPPSQSQTHPPISSPTGLFEKSGAETAMAHKVDHEYDY 142
                                                  LFEKSGAETAMAHKVDHEYDY
Sbjct: 61  ---------------------------------------LFEKSGAETAMAHKVDHEYDY 120

Query: 143 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQSMEQKIEKGDNRGFQL 202
           LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQ                
Sbjct: 121 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQ---------------- 180

Query: 203 KLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLREL 262
                VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLREL
Sbjct: 181 -----VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLREL 240

Query: 263 RDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTIL 322
           RDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTIL
Sbjct: 241 RDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTIL 273

Query: 323 TEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 370
           TEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS
Sbjct: 301 TEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 273

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BLAST of CsaV3_6G016560 vs. NCBI nr
Match: KAG6605436.1 (Ras-related protein Rab11C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 429.9 bits (1104), Expect = 2.3e-116
Identity = 227/274 (82.85%), Postives = 237/274 (86.50%), Query Frame = 0


Query: 96  AVAAVVNFLSPPSQSQTHPPISSPTGLFEKSGAETAMAHKVDHEYDYLFKIVLIGDSGVG 155
           A    VN LS P    T P +  PTGLFEKSGAETAMAHKVDHEYDYLFKIVLIGDSGVG
Sbjct: 6   AHGTTVNLLSNP--ISTSPFLRQPTGLFEKSGAETAMAHKVDHEYDYLFKIVLIGDSGVG 65

Query: 156 KSNILSRFTRNEFCLESKSTIGVEFSTKTLQSMEQKIEKGDNRGFQLKLSNYVEGKTVKA 215
           KSNILSRFTRNEFCLESKSTIGVEFST+TL+                     VEGKTVK+
Sbjct: 66  KSNILSRFTRNEFCLESKSTIGVEFSTRTLE---------------------VEGKTVKS 125

Query: 216 QIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVIVMI 275
           QIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTF+NVQRWLRELRDHADSNIVIVMI
Sbjct: 126 QIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIVIVMI 185

Query: 276 GNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKKALA 335
           GNKSDL+HLR+VSEDDGQ MAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKKALA
Sbjct: 186 GNKSDLNHLRAVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKKALA 245

Query: 336 AQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 370
           AQEAAAS+ HPGQGTTINV++TSGDSNRRGCCSS
Sbjct: 246 AQEAAASVPHPGQGTTINVTETSGDSNRRGCCSS 256

[Close]

BLAST of CsaV3_6G016560 vs. NCBI nr
Match: KAG7035384.1 (Ras-related protein Rab11C, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 421.0 bits (1081), Expect = 1.1e-113
Identity = 217/250 (86.80%), Postives = 227/250 (90.80%), Query Frame = 0


Query: 120 TGLFEKSGAETAMAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVE 179
           +GLFEKSGAETAMAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVE
Sbjct: 19  SGLFEKSGAETAMAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVE 78

Query: 180 FSTKTLQSMEQKIEKGDNRGFQLKLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVG 239
           FST+TL+                     VEGKTVK+QIWDTAGQERYRAITSAYYRGAVG
Sbjct: 79  FSTRTLE---------------------VEGKTVKSQIWDTAGQERYRAITSAYYRGAVG 138

Query: 240 ALLVYDLTKRQTFENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKE 299
           ALLVYDLTKRQTF+NVQRWLRELRDHADSNIVIVMIGNKSDL+HLR+VSEDDGQ MAEKE
Sbjct: 139 ALLVYDLTKRQTFDNVQRWLRELRDHADSNIVIVMIGNKSDLNHLRAVSEDDGQAMAEKE 198

Query: 300 GLSFIETSALDATNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSG 359
           GLSFIETSALDATNIDKAFQTILTEIYHIISKKALAAQEAAAS+ HPGQGTTINV++TSG
Sbjct: 199 GLSFIETSALDATNIDKAFQTILTEIYHIISKKALAAQEAAASVPHPGQGTTINVTETSG 247

Query: 360 DSNRRGCCSS 370
           DSNRRGCCSS
Sbjct: 259 DSNRRGCCSS 247

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BLAST of CsaV3_6G016560 vs. NCBI nr
Match: XP_004143134.1 (ras-related protein Rab11C [Cucumis sativus] >XP_008464080.1 PREDICTED: ras-related protein Rab11C [Cucumis melo] >XP_031743658.1 ras-related protein Rab11C [Cucumis sativus] >KAA0061865.1 ras-related protein Rab2BV [Cucumis melo var. makuwa] >KAE8645886.1 hypothetical protein Csa_017717 [Cucumis sativus])

HSP 1 Score: 413.7 bits (1062), Expect = 1.7e-111
Identity = 217/238 (91.18%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 132 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQSMEQK 191
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQ     
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQ----- 60

Query: 192 IEKGDNRGFQLKLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT 251
                           VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT
Sbjct: 61  ----------------VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT 120

Query: 252 FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA 311
           FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA
Sbjct: 121 FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA 180

Query: 312 TNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 370
           TNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS
Sbjct: 181 TNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 217

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BLAST of CsaV3_6G016560 vs. ExPASy Swiss-Prot
Match: Q40193 (Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 3.1e-100
Identity = 188/238 (78.99%), Postives = 209/238 (87.82%), Query Frame = 0


Query: 132 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQSMEQK 191
           MAH+VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+T+TLQ     
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 192 IEKGDNRGFQLKLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT 251
                           VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQT
Sbjct: 61  ----------------VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQT 120

Query: 252 FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA 311
           F+NVQRWLRELRDHADSNIVI+M GNKSDL+HLR+VSEDDG  ++EKEGLSF+ETSAL+A
Sbjct: 121 FDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEA 180

Query: 312 TNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 370
           TNI+KAFQTILTEIYHI+SKKALAAQEA A  + PGQGTTINV+DTSG++ ++GCCS+
Sbjct: 181 TNIEKAFQTILTEIYHIVSKKALAAQEATAGASVPGQGTTINVADTSGNT-KKGCCST 216

[Close]

BLAST of CsaV3_6G016560 vs. ExPASy Swiss-Prot
Match: Q9LNW1 (Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2)

HSP 1 Score: 355.9 bits (912), Expect = 5.5e-97
Identity = 184/238 (77.31%), Postives = 209/238 (87.82%), Query Frame = 0


Query: 132 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQSMEQK 191
           MA+++DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+T+TLQ     
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 192 IEKGDNRGFQLKLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT 251
                           VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQT
Sbjct: 61  ----------------VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQT 120

Query: 252 FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA 311
           FENV RWLRELRDHADSNIVI+M GNKSDL+HLRSV+++DG+++AEKEGLSF+ETSAL+A
Sbjct: 121 FENVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEA 180

Query: 312 TNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 370
           TNI+KAFQTIL+EIYHIISKKALAAQEAA ++  PGQGT IN+SD+S  +NR+GCCS+
Sbjct: 181 TNIEKAFQTILSEIYHIISKKALAAQEAAGNL--PGQGTAINISDSSA-TNRKGCCST 214

[Close]

BLAST of CsaV3_6G016560 vs. ExPASy Swiss-Prot
Match: Q39434 (Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 5.5e-97
Identity = 186/238 (78.15%), Postives = 206/238 (86.55%), Query Frame = 0


Query: 132 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQSMEQK 191
           MA++VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+T+TLQ     
Sbjct: 1   MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 192 IEKGDNRGFQLKLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT 251
                           VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQT
Sbjct: 61  ----------------VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQT 120

Query: 252 FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA 311
           F+NVQRWLRELRDHADSNIVI+M GNKSDL HLR+VSE+DGQ +AEKEGLSF+ETSAL+A
Sbjct: 121 FDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEA 180

Query: 312 TNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 370
            NI+KAFQTILTEIYHIISKKALAAQEA++++  PGQGTTINV+D S  + RR CCS+
Sbjct: 181 VNIEKAFQTILTEIYHIISKKALAAQEASSNL--PGQGTTINVADASA-NQRRSCCST 214

[Close]

BLAST of CsaV3_6G016560 vs. ExPASy Swiss-Prot
Match: Q96283 (Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4)

HSP 1 Score: 352.8 bits (904), Expect = 4.6e-96
Identity = 185/239 (77.41%), Postives = 205/239 (85.77%), Query Frame = 0


Query: 132 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQSMEQK 191
           M H+VD EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+T+T Q     
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQ----- 60

Query: 192 IEKGDNRGFQLKLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT 251
                           VEGKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQT
Sbjct: 61  ----------------VEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQT 120

Query: 252 FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA 311
           F+NV RWLRELRDHADSNIVI+M GNKSDL+HLRSV+E+DGQ++AEKEGLSF+ETSAL+A
Sbjct: 121 FDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEA 180

Query: 312 TNIDKAFQTILTEIYHIISKKALAAQEAAASITH-PGQGTTINVSDTSGDSNRRGCCSS 370
           TN++KAFQTIL EIYHIISKKALAAQEAAA+ +  PGQGTTINV DTSG + +R CCSS
Sbjct: 181 TNVEKAFQTILGEIYHIISKKALAAQEAAAANSAIPGQGTTINVDDTSGGA-KRACCSS 217

[Close]

BLAST of CsaV3_6G016560 vs. ExPASy Swiss-Prot
Match: Q9FIF9 (Ras-related protein RABA2d OS=Arabidopsis thaliana OX=3702 GN=RABA2D PE=2 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 6.0e-96
Identity = 183/239 (76.57%), Postives = 207/239 (86.61%), Query Frame = 0


Query: 132 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQSMEQK 191
           MAH+V+ +YDYLFKIVLIGDSGVGK+NILSRFTRNEFCLESKSTIGVEF+T+TLQ     
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 192 IEKGDNRGFQLKLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT 251
                           VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQT
Sbjct: 61  ----------------VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQT 120

Query: 252 FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA 311
           F+NV RWLRELRDHADSNIVI+M GNK+DL+HLRSV+E+DGQT+AE EGLSF+ETSAL+A
Sbjct: 121 FDNVLRWLRELRDHADSNIVIMMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEA 180

Query: 312 TNIDKAFQTILTEIYHIISKKALAAQEAAASITH-PGQGTTINVSDTSGDSNRRGCCSS 370
           TN++KAFQT+L EIYHIISKKALAAQEAAA+ +  PGQGTTINV DTSG + +RGCCS+
Sbjct: 181 TNVEKAFQTVLAEIYHIISKKALAAQEAAAANSAIPGQGTTINVEDTSG-AGKRGCCST 217

[Close]

BLAST of CsaV3_6G016560 vs. ExPASy TrEMBL
Match: A0A5D3CU43 (Ras-related protein Rab2BV OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00310 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 5.6e-129
Identity = 263/347 (75.79%), Postives = 265/347 (76.37%), Query Frame = 0


Query: 23  MSTRTGHISIGGGGSPNALASPSAKSQLPSTHDNIKDSSSPAPHDNSTNPLSVLSLTSLF 82
           MST   H SI GGGSPNALASPSAKSQLPSTH+NIKDSSSP+P                 
Sbjct: 1   MSTPRVHRSISGGGSPNALASPSAKSQLPSTHNNIKDSSSPSPRRR-------------- 60

Query: 83  NSLCLIQSFDSSAAVAAVVNFLSPPSQSQTHPPISSPTGLFEKSGAETAMAHKVDHEYDY 142
                                                  LFEKSGAETAMAHKVDHEYDY
Sbjct: 61  ---------------------------------------LFEKSGAETAMAHKVDHEYDY 120

Query: 143 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQSMEQKIEKGDNRGFQL 202
           LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQ                
Sbjct: 121 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQ---------------- 180

Query: 203 KLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLREL 262
                VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLREL
Sbjct: 181 -----VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLREL 240

Query: 263 RDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTIL 322
           RDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTIL
Sbjct: 241 RDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTIL 273

Query: 323 TEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 370
           TEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS
Sbjct: 301 TEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 273

[Close]

BLAST of CsaV3_6G016560 vs. ExPASy TrEMBL
Match: A0A5A7V7L9 (Ras-related protein Rab2BV OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G001070 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 8.2e-112
Identity = 217/238 (91.18%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 132 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQSMEQK 191
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQ     
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQ----- 60

Query: 192 IEKGDNRGFQLKLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT 251
                           VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT
Sbjct: 61  ----------------VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT 120

Query: 252 FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA 311
           FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA
Sbjct: 121 FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA 180

Query: 312 TNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 370
           TNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS
Sbjct: 181 TNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 217

[Close]

BLAST of CsaV3_6G016560 vs. ExPASy TrEMBL
Match: A0A0A0KE61 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188120 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 8.2e-112
Identity = 217/238 (91.18%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 132 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQSMEQK 191
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQ     
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQ----- 60

Query: 192 IEKGDNRGFQLKLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT 251
                           VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT
Sbjct: 61  ----------------VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT 120

Query: 252 FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA 311
           FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA
Sbjct: 121 FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA 180

Query: 312 TNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 370
           TNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS
Sbjct: 181 TNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 217

[Close]

BLAST of CsaV3_6G016560 vs. ExPASy TrEMBL
Match: A0A1S3CKN1 (ras-related protein Rab11C OS=Cucumis melo OX=3656 GN=LOC103502054 PE=4 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 8.2e-112
Identity = 217/238 (91.18%), Postives = 217/238 (91.18%), Query Frame = 0


Query: 132 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQSMEQK 191
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQ     
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQ----- 60

Query: 192 IEKGDNRGFQLKLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT 251
                           VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT
Sbjct: 61  ----------------VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT 120

Query: 252 FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA 311
           FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA
Sbjct: 121 FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA 180

Query: 312 TNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 370
           TNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS
Sbjct: 181 TNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 217

[Close]

BLAST of CsaV3_6G016560 vs. ExPASy TrEMBL
Match: A0A6J1G4Z7 (ras-related protein Rab11C OS=Cucurbita moschata OX=3662 GN=LOC111450970 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 1.6e-107
Identity = 206/238 (86.55%), Postives = 215/238 (90.34%), Query Frame = 0


Query: 132 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQSMEQK 191
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFST+TL+     
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLE----- 60

Query: 192 IEKGDNRGFQLKLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT 251
                           VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT
Sbjct: 61  ----------------VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT 120

Query: 252 FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA 311
           F+NVQRWLRELRDHADSNIVIVMIGNKSDL+HLR+VSEDDGQ MAEKEGLSFIETSALDA
Sbjct: 121 FDNVQRWLRELRDHADSNIVIVMIGNKSDLNHLRAVSEDDGQAMAEKEGLSFIETSALDA 180

Query: 312 TNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 370
           TNIDKAFQTILTEIYHIISKKALAAQE+AAS+ HPGQGTTINV++TSGDSNRRGCCSS
Sbjct: 181 TNIDKAFQTILTEIYHIISKKALAAQESAASVPHPGQGTTINVTETSGDSNRRGCCSS 217

[Close]

BLAST of CsaV3_6G016560 vs. TAIR 10
Match: AT1G07410.1 (RAB GTPase homolog A2B )

HSP 1 Score: 355.9 bits (912), Expect = 3.9e-98
Identity = 184/238 (77.31%), Postives = 209/238 (87.82%), Query Frame = 0


Query: 132 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQSMEQK 191
           MA+++DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+T+TLQ     
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 192 IEKGDNRGFQLKLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT 251
                           VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQT
Sbjct: 61  ----------------VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQT 120

Query: 252 FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA 311
           FENV RWLRELRDHADSNIVI+M GNKSDL+HLRSV+++DG+++AEKEGLSF+ETSAL+A
Sbjct: 121 FENVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEA 180

Query: 312 TNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 370
           TNI+KAFQTIL+EIYHIISKKALAAQEAA ++  PGQGT IN+SD+S  +NR+GCCS+
Sbjct: 181 TNIEKAFQTILSEIYHIISKKALAAQEAAGNL--PGQGTAINISDSSA-TNRKGCCST 214

[Close]

BLAST of CsaV3_6G016560 vs. TAIR 10
Match: AT3G46830.1 (RAB GTPase homolog A2C )

HSP 1 Score: 352.8 bits (904), Expect = 3.3e-97
Identity = 185/239 (77.41%), Postives = 205/239 (85.77%), Query Frame = 0


Query: 132 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQSMEQK 191
           M H+VD EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+T+T Q     
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQ----- 60

Query: 192 IEKGDNRGFQLKLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT 251
                           VEGKT+KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQT
Sbjct: 61  ----------------VEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQT 120

Query: 252 FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA 311
           F+NV RWLRELRDHADSNIVI+M GNKSDL+HLRSV+E+DGQ++AEKEGLSF+ETSAL+A
Sbjct: 121 FDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEA 180

Query: 312 TNIDKAFQTILTEIYHIISKKALAAQEAAASITH-PGQGTTINVSDTSGDSNRRGCCSS 370
           TN++KAFQTIL EIYHIISKKALAAQEAAA+ +  PGQGTTINV DTSG + +R CCSS
Sbjct: 181 TNVEKAFQTILGEIYHIISKKALAAQEAAAANSAIPGQGTTINVDDTSGGA-KRACCSS 217

[Close]

BLAST of CsaV3_6G016560 vs. TAIR 10
Match: AT5G59150.1 (RAB GTPase homolog A2D )

HSP 1 Score: 352.4 bits (903), Expect = 4.3e-97
Identity = 183/239 (76.57%), Postives = 207/239 (86.61%), Query Frame = 0


Query: 132 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQSMEQK 191
           MAH+V+ +YDYLFKIVLIGDSGVGK+NILSRFTRNEFCLESKSTIGVEF+T+TLQ     
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 192 IEKGDNRGFQLKLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT 251
                           VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKRQT
Sbjct: 61  ----------------VEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQT 120

Query: 252 FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA 311
           F+NV RWLRELRDHADSNIVI+M GNK+DL+HLRSV+E+DGQT+AE EGLSF+ETSAL+A
Sbjct: 121 FDNVLRWLRELRDHADSNIVIMMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEA 180

Query: 312 TNIDKAFQTILTEIYHIISKKALAAQEAAASITH-PGQGTTINVSDTSGDSNRRGCCSS 370
           TN++KAFQT+L EIYHIISKKALAAQEAAA+ +  PGQGTTINV DTSG + +RGCCS+
Sbjct: 181 TNVEKAFQTVLAEIYHIISKKALAAQEAAAANSAIPGQGTTINVEDTSG-AGKRGCCST 217

[Close]

BLAST of CsaV3_6G016560 vs. TAIR 10
Match: AT1G09630.1 (RAB GTPase 11C )

HSP 1 Score: 307.0 bits (785), Expect = 2.1e-83
Identity = 158/238 (66.39%), Postives = 192/238 (80.67%), Query Frame = 0


Query: 132 MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQSMEQK 191
           MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEF+T+TLQ     
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQ----- 60

Query: 192 IEKGDNRGFQLKLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQT 251
                           VEG+TVKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  T
Sbjct: 61  ----------------VEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTT 120

Query: 252 FENVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDA 311
           FENV RWL+ELRDHADSNIVI++IGNK+DL HLR+V+ +D Q+ AEKEGLSFIETSAL+A
Sbjct: 121 FENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEA 180

Query: 312 TNIDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 370
            N++KAFQTIL+E+Y IISKK++++ +  A+  +  +G TI+V+ TS  + ++ CCSS
Sbjct: 181 LNVEKAFQTILSEVYRIISKKSISSDQTTAN-ANIKEGQTIDVAATSESNAKKPCCSS 216

[Close]

BLAST of CsaV3_6G016560 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D )

HSP 1 Score: 272.3 bits (695), Expect = 5.6e-73
Identity = 136/236 (57.63%), Postives = 174/236 (73.73%), Query Frame = 0


Query: 134 HKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQSMEQKIE 193
           ++ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEF+T++L        
Sbjct: 4   YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLN------- 63

Query: 194 KGDNRGFQLKLSNYVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFE 253
                         V  K +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+  TFE
Sbjct: 64  --------------VNEKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFE 123

Query: 254 NVQRWLRELRDHADSNIVIVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATN 313
           NV+RWLRELRDH D NIV++++GNKSDL HL +V  +D ++ AE E L F+ETSAL++TN
Sbjct: 124 NVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTN 183

Query: 314 IDKAFQTILTEIYHIISKKALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 370
           ++ AF  +LT+IYH++SKKA+ A E + ++   G+   ++VS       + GCCS+
Sbjct: 184 VENAFSEVLTQIYHVVSKKAMEAGEDSGNVPSKGEKIDVDVSAV----KKTGCCSN 214

The following BLAST results are available for this feature:

BLAST of CsaV3_6G016560 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN47145.2	3.5e-202	100.00	hypothetical protein Csa_020843 [Cucumis sativus]	[more]
TYK15391.1	1.2e-128	75.79	ras-related protein Rab2BV [Cucumis melo var. makuwa]	[more]
KAG6605436.1	2.3e-116	82.85	Ras-related protein Rab11C, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7035384.1	1.1e-113	86.80	Ras-related protein Rab11C, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_004143134.1	1.7e-111	91.18	ras-related protein Rab11C [Cucumis sativus] >XP_008464080.1 PREDICTED: ras-rela...	[more]

BLAST of CsaV3_6G016560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40193	3.1e-100	78.99	Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1	[more]
Q9LNW1	5.5e-97	77.31	Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2	[more]
Q39434	5.5e-97	78.15	Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1	[more]
Q96283	4.6e-96	77.41	Ras-related protein RABA2c OS=Arabidopsis thaliana OX=3702 GN=RABA2C PE=2 SV=4	[more]
Q9FIF9	6.0e-96	76.57	Ras-related protein RABA2d OS=Arabidopsis thaliana OX=3702 GN=RABA2D PE=2 SV=1	[more]

BLAST of CsaV3_6G016560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CU43	5.6e-129	75.79	Ras-related protein Rab2BV OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A5A7V7L9	8.2e-112	91.18	Ras-related protein Rab2BV OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A0A0KE61	8.2e-112	91.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188120 PE=4 SV=1	[more]
A0A1S3CKN1	8.2e-112	91.18	ras-related protein Rab11C OS=Cucumis melo OX=3656 GN=LOC103502054 PE=4 SV=1	[more]
A0A6J1G4Z7	1.6e-107	86.55	ras-related protein Rab11C OS=Cucurbita moschata OX=3662 GN=LOC111450970 PE=4 SV...	[more]

BLAST of CsaV3_6G016560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07410.1	3.9e-98	77.31	RAB GTPase homolog A2B	[more]
AT3G46830.1	3.3e-97	77.41	RAB GTPase homolog A2C	[more]
AT5G59150.1	4.3e-97	76.57	RAB GTPase homolog A2D	[more]
AT1G09630.1	2.1e-83	66.39	RAB GTPase 11C	[more]
AT4G18800.1	5.6e-73	57.63	RAB GTPase homolog A1D	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 303..325 score: 39.51 coord: 268..281 score: 46.24 coord: 206..228 score: 52.88 coord: 167..183 score: 35.91 coord: 144..165 score: 52.05
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 144..328 e-value: 1.5E-105 score: 366.6
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 149..362 e-value: 7.6E-5 score: 19.9
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 141..328 e-value: 1.4E-21 score: 87.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 346..369
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 207..368
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 132..188
None	No IPR available	PANTHER	PTHR47978:SF33	RAS-RELATED PROTEIN RABA2D	coord: 207..368
None	No IPR available	PANTHER	PTHR47978:SF33	RAS-RELATED PROTEIN RABA2D	coord: 132..188
None	No IPR available	PROSITE	PS51419	RAB	coord: 139..367 score: 35.243839
None	No IPR available	PROSITE	PS51420	RHO	coord: 137..340 score: 9.830446
None	No IPR available	CDD	cd01868	Rab11_like	coord: 141..326 e-value: 1.40695E-124 score: 353.788
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 146..324 e-value: 6.2E-11 score: 20.6
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 145..326 e-value: 1.9E-55 score: 186.8
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 139..344 score: 17.513369
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 136..367 e-value: 8.6E-70 score: 236.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 139..331
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 142..321 e-value: 1.8E-35 score: 120.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G016560.1	CsaV3_6G016560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding