CsaV3_6G015440 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCTTCAAGAGTGGAGTTCTCAAGCCTATGCGAATGCCAAAATGTACAAGGAAAGGACAAAGGCATGGCATGATAACTGAATTCGTAAACGTGAATTTAGAATTGGTTAGAAAGTATTATTATTCAATTCATGTTTCCGACTATTTCTAGGTAAGCTCTGATCAAGATGGTTTGGGCCATTTTTGGTTAAGCAAGTTTTTCCACATGGTGCAGTAGAGATCACATCATCAGATGGAACAAATGCGTTTAAGGTAAACAGACAGAGGCTCAAGGTGTACATTGACAAAGAACGATGTGATAAATTTTTTGTCAAACTGTTGTAAAACGCCTTTTACACAGTGCCTATGAAACGCATATATGCATTTTGTAACTCATTGCAAGGTTTATCATGTATACATAATGCATCCTTTTGTGTATCATTATTGCTTTATTTTGCTTTTCTTCTTCTTGCTTAGTTGTTTATTTTCTTATTTTAATTGAATTCTTTTTCATCTTCTTAATCGCTTTACGAACTTCTTTTAATCGCATCTTTCATGTTTTGCTCTCTTTACAATATATCTTTATCGCTTAATATCCCTAGGATAGTTAGAACTCTTTTGTGCTTATGAAAAATCATTGGACGATTTGCTGCTATGCAAGAAATCAAAGGACAATGACGCGAAAGAAACCTAGGTGGCATGCTTTGGGGTTTTGAAATTTAAATTGTCTAGAAAATTGTGCTTTACGTGAGAAATGTGAGATGTCGTCATCATCAAACTATCACTGAAGGCTTTGAAGAGATGCGCTGACCTGTGCCAGATGCAATTAATGATGTGATGGTCGTAATAATTACCCCTTAGCAAATATATATCTGAAGCACTCCCTTTTACGTTTTTCTTTAAAATTTATCGCGCTTAGGATTTCCCATTTTTAAACCCTTGCTGGAAAATTACTTCATCTCCATTGTCCCTTCATTTATCCATTTTCAATGGTCGACAAGCATAAAAAAACCTCCAAAATCACTCAAATTACTAAAAGTCTTCAGCAGACAAACGTTTCATTTTCACCAAAACAACCCAAACACCCAAAAGTTTCAAAGACCGTCGGAACCACTTCTCAGAAATCCAGACATGAGGAGTCTAGGAAGAAGATAATCTTCAAGCCATGCACCCACCCCTTAACTCAAAATGAAACCCACTTCGTTAGACCTAGTTTGGAAGCTGGAGACTAGATTAGGCGAGAGGAAAAAATATATATGGAATTACTAGATTTGGGAATAGGGATGGAAGCCATAAATCCAGAGGACAGACGACCACATTACTTACACTTAAAACACGGGCCTGGAAAAGTACTTTTGGGGCATAAGGAAGCCAAGCACAAAGGAAACTCTACACATTCCTTTTCAATTATCAAGTCAAGTTATGAAACTCTTAGAAGAATTATAGGTTGTTGAGAAAACGAAGAGGGACGTGGAAGAGAAGAACAAGGAAGATGAAGAAAGAATTAGAAAAAAAAGAAAGAAAGAGAAAAGAGCCCTCCGTGAGGAAAGGGCAAGAAAGGAAGAGGAAAGAATAAGGGAAGATGAGGAAAGAAGAAATAGAGAACGCATACACAAAGCACGGATGATGAAGGAAAAACGGGAAAAAGAAGAAGCAGACAGGATAGAGCGAGAAGCAGCCCGCAAAGAGGATAAGTGTTTTCGTAAGATATCCAAGGAGAAAAGGCAAAGTGTGACCTCCTTGGCAGAAGCAAAAAGCAAATTGGCGAAGATACAGACTCCCAAGAAAATGAAACAGGAAAAGCTTGAGAAACTGGGTGAGAAAGTAGAAAGAGTTGCCACAAAATATAAGACGACAGAGTAG ATGAGCTTCAAGAGTGGAGTTCTCAAGCCTATGCGAATGCCAAAATGTACAAGGAAAGGACAAAGGCATGGCATGATAACTGAATTCGTAAACGTGAATTTAGAATTGCAAGTTTTTCCACATGGTGCAGTAGAGATCACATCATCAGATGGAACAAATGCGTTTAAGGTTGTTGAGAAAACGAAGAGGGACGTGGAAGAGAAGAACAAGGAAGATGAAGAAAGAATTAGAAAAAAAAGAAAGAAAGAGAAAAGAGCCCTCCGTGAGGAAAGGGCAAGAAAGGAAGAGGAAAGAATAAGGGAAGATGAGGAAAGAAGAAATAGAGAACGCATACACAAAGCACGGATGATGAAGGAAAAACGGGAAAAAGAAGAAGCAGACAGGATAGAGCGAGAAGCAGCCCGCAAAGAGGATAAGTGTTTTCGTAAGATATCCAAGGAGAAAAGGCAAAGTGTGACCTCCTTGGCAGAAGCAAAAAGCAAATTGGCGAAGATACAGACTCCCAAGAAAATGAAACAGGAAAAGCTTGAGAAACTGGGTGAGAAAGTAGAAAGAGTTGCCACAAAATATAAGACGACAGAGTAG ATGAGCTTCAAGAGTGGAGTTCTCAAGCCTATGCGAATGCCAAAATGTACAAGGAAAGGACAAAGGCATGGCATGATAACTGAATTCGTAAACGTGAATTTAGAATTGCAAGTTTTTCCACATGGTGCAGTAGAGATCACATCATCAGATGGAACAAATGCGTTTAAGGTTGTTGAGAAAACGAAGAGGGACGTGGAAGAGAAGAACAAGGAAGATGAAGAAAGAATTAGAAAAAAAAGAAAGAAAGAGAAAAGAGCCCTCCGTGAGGAAAGGGCAAGAAAGGAAGAGGAAAGAATAAGGGAAGATGAGGAAAGAAGAAATAGAGAACGCATACACAAAGCACGGATGATGAAGGAAAAACGGGAAAAAGAAGAAGCAGACAGGATAGAGCGAGAAGCAGCCCGCAAAGAGGATAAGTGTTTTCGTAAGATATCCAAGGAGAAAAGGCAAAGTGTGACCTCCTTGGCAGAAGCAAAAAGCAAATTGGCGAAGATACAGACTCCCAAGAAAATGAAACAGGAAAAGCTTGAGAAACTGGGTGAGAAAGTAGAAAGAGTTGCCACAAAATATAAGACGACAGAGTAG MSFKSGVLKPMRMPKCTRKGQRHGMITEFVNVNLELQVFPHGAVEITSSDGTNAFKVVEKTKRDVEEKNKEDEERIRKKRKKEKRALREERARKEEERIREDEERRNRERIHKARMMKEKREKEEADRIEREAARKEDKCFRKISKEKRQSVTSLAEAKSKLAKIQTPKKMKQEKLEKLGEKVERVATKYKTTE* Homology
BLAST of CsaV3_6G015440 vs. NCBI nr
Match: KAE8646926.1 (hypothetical protein Csa_020807 [Cucumis sativus]) HSP 1 Score: 334.0 bits (855), Expect = 8.9e-88 Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0
BLAST of CsaV3_6G015440 vs. NCBI nr
Match: TYK15883.1 (hypothetical protein E5676_scaffold637G00630 [Cucumis melo var. makuwa]) HSP 1 Score: 83.2 bits (204), Expect = 2.7e-12 Identity = 63/120 (52.50%), Postives = 88/120 (73.33%), Query Frame = 0
BLAST of CsaV3_6G015440 vs. NCBI nr
Match: KAA0053403.1 (hypothetical protein E6C27_scaffold428G00710 [Cucumis melo var. makuwa]) HSP 1 Score: 80.1 bits (196), Expect = 2.3e-11 Identity = 62/120 (51.67%), Postives = 87/120 (72.50%), Query Frame = 0
BLAST of CsaV3_6G015440 vs. NCBI nr
Match: KGN51420.1 (hypothetical protein Csa_008540 [Cucumis sativus]) HSP 1 Score: 67.4 bits (163), Expect = 1.6e-07 Identity = 50/67 (74.63%), Postives = 59/67 (88.06%), Query Frame = 0
BLAST of CsaV3_6G015440 vs. NCBI nr
Match: KAA0067088.1 (hypothetical protein E6C27_scaffold38G001420 [Cucumis melo var. makuwa] >TYK26323.1 hypothetical protein E5676_scaffold14G001050 [Cucumis melo var. makuwa]) HSP 1 Score: 60.5 bits (145), Expect = 1.9e-05 Identity = 43/88 (48.86%), Postives = 59/88 (67.05%), Query Frame = 0
BLAST of CsaV3_6G015440 vs. ExPASy TrEMBL
Match: A0A0A0KDX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G160700 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 8.3e-47 Identity = 125/128 (97.66%), Postives = 127/128 (99.22%), Query Frame = 0
BLAST of CsaV3_6G015440 vs. ExPASy TrEMBL
Match: A0A5D3CVJ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00630 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.3e-12 Identity = 63/120 (52.50%), Postives = 88/120 (73.33%), Query Frame = 0
BLAST of CsaV3_6G015440 vs. ExPASy TrEMBL
Match: A0A5A7UBY9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold428G00710 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.1e-11 Identity = 62/120 (51.67%), Postives = 87/120 (72.50%), Query Frame = 0
BLAST of CsaV3_6G015440 vs. ExPASy TrEMBL
Match: A0A0A0KP73 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G534980 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 7.6e-08 Identity = 50/67 (74.63%), Postives = 59/67 (88.06%), Query Frame = 0
BLAST of CsaV3_6G015440 vs. ExPASy TrEMBL
Match: A0A5D3DRS5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold14G001050 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 9.2e-06 Identity = 43/88 (48.86%), Postives = 59/88 (67.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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