CsaV3_6G015360 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G015360
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 11195963 .. 11196211 (-)
RNA-Seq ExpressionCsaV3_6G015360
SyntenyCsaV3_6G015360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGAAAGAAACGTGGCAAAGGAAAAGAGGTATGAAGGAGAAAGGGGGTTGGTAATAAATTGGGATCTGGTAATAATTTGGGTTCCCGCCATTGGAGAAAAGAAGAAGAAAGAAGCAGAGGGAAGAGATCTCGGAGGAAGAAGAAGAGTAGTGGCCATGGAAGTTCACCGCGTGGATCGGGTGCGAACAAATCTAGCGGTTGCTTCTTGCAACCAACATCCCTTCTTAATTCTATTCTATTTTTAG

mRNA sequence

ATGAGAGAAAGAAACGTGGCAAAGGAAAAGAGGTATGAAGGAGAAAGGGGGTTGGTAATAAATTGGGATCTGGTAATAATTTGGGTTCCCGCCATTGGAGAAAAGAAGAAGAAAGAAGCAGAGGGAAGAGATCTCGGAGGAAGAAGAAGAGTAGTGGCCATGGAAGTTCACCGCGTGGATCGGGTGCGAACAAATCTAGCGGTTGCTTCTTGCAACCAACATCCCTTCTTAATTCTATTCTATTTTTAG

Coding sequence (CDS)

ATGAGAGAAAGAAACGTGGCAAAGGAAAAGAGGTATGAAGGAGAAAGGGGGTTGGTAATAAATTGGGATCTGGTAATAATTTGGGTTCCCGCCATTGGAGAAAAGAAGAAGAAAGAAGCAGAGGGAAGAGATCTCGGAGGAAGAAGAAGAGTAGTGGCCATGGAAGTTCACCGCGTGGATCGGGTGCGAACAAATCTAGCGGTTGCTTCTTGCAACCAACATCCCTTCTTAATTCTATTCTATTTTTAG

Protein sequence

MRERNVAKEKRYEGERGLVINWDLVIIWVPAIGEKKKKEAEGRDLGGRRRVVAMEVHRVDRVRTNLAVASCNQHPFLILFYF*
Homology
[Close]
BLAST of CsaV3_6G015360 vs. NCBI nr
Match: KGN46992.1 (hypothetical protein Csa_021066 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 5.6e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  MRERNVAKEKRYEGERGLVINWDLVIIWVPAIGEKKKKEAEGRDLGGRRRVVAMEVHRVD 60
          MRERNVAKEKRYEGERGLVINWDLVIIWVPAIGEKKKKEAEGRDLGGRRRVVAMEVHRVD
Sbjct: 1  MRERNVAKEKRYEGERGLVINWDLVIIWVPAIGEKKKKEAEGRDLGGRRRVVAMEVHRVD 60

Query: 61 RVRTNLAVASCNQHPFLILFYF 83
          RVRTNLAVASCNQHPFLILFYF
Sbjct: 61 RVRTNLAVASCNQHPFLILFYF 82

[Close]
BLAST of CsaV3_6G015360 vs. ExPASy TrEMBL
Match: A0A0A0KF40 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G157660 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.7e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0 

Query: 1  MRERNVAKEKRYEGERGLVINWDLVIIWVPAIGEKKKKEAEGRDLGGRRRVVAMEVHRVD 60
          MRERNVAKEKRYEGERGLVINWDLVIIWVPAIGEKKKKEAEGRDLGGRRRVVAMEVHRVD
Sbjct: 1  MRERNVAKEKRYEGERGLVINWDLVIIWVPAIGEKKKKEAEGRDLGGRRRVVAMEVHRVD 60

Query: 61 RVRTNLAVASCNQHPFLILFYF 83
          RVRTNLAVASCNQHPFLILFYF
Sbjct: 61 RVRTNLAVASCNQHPFLILFYF 82

The following BLAST results are available for this feature:
BLAST of CsaV3_6G015360 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46992.15.6e-39100.00hypothetical protein Csa_021066 [Cucumis sativus][more]
BLAST of CsaV3_6G015360 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G015360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KF402.7e-39100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G157660 PE=4 SV=1[more]
BLAST of CsaV3_6G015360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G015360.1CsaV3_6G015360.1mRNA