CsaV3_6G014870 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G014870
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionSerine/threonine-protein kinase D6PKL2
Locationchr6: 10780321 .. 10780637 (+)
RNA-Seq ExpressionCsaV3_6G014870
SyntenyCsaV3_6G014870
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACAGTTGGTCTCGTCTCCCCATCAAACGGGTTTCTAAACTTGTATTGATCTGGCTGGTACGTACCGAAGCATGTTCTTTTGAACTTTGTCTACTGTCATTTTATACTATCACTATTTCATAATATCTCACATTTTGATATGATGTTGATTCTTCTTGTGTCTCTTCGCCTAGCAGAAGCCGCCTCTTATCTGTGCTTCCCATGGTGCACTAGCGTCCATTCCCTGTCTTGGTGTCCTCAGAGATAAGTACATAAGGCATACATCTGATCTTCTGTTGAGGGCTTGCAATAGCAAAGTAGCTGGCGATAGCTGA

mRNA sequence

ATGTACAGTTGGTCTCGTCTCCCCATCAAACGGGTTTCTAAACTTGTATTGATCTGGCTGAAGCCGCCTCTTATCTGTGCTTCCCATGGTGCACTAGCGTCCATTCCCTGTCTTGGTGTCCTCAGAGATAAGTACATAAGGCATACATCTGATCTTCTGTTGAGGGCTTGCAATAGCAAAGTAGCTGGCGATAGCTGA

Coding sequence (CDS)

ATGTACAGTTGGTCTCGTCTCCCCATCAAACGGGTTTCTAAACTTGTATTGATCTGGCTGAAGCCGCCTCTTATCTGTGCTTCCCATGGTGCACTAGCGTCCATTCCCTGTCTTGGTGTCCTCAGAGATAAGTACATAAGGCATACATCTGATCTTCTGTTGAGGGCTTGCAATAGCAAAGTAGCTGGCGATAGCTGA

Protein sequence

MYSWSRLPIKRVSKLVLIWLKPPLICASHGALASIPCLGVLRDKYIRHTSDLLLRACNSKVAGDS*
Homology
[Close]
BLAST of CsaV3_6G014870 vs. NCBI nr
Match: KGN46935.1 (hypothetical protein Csa_020610 [Cucumis sativus])

HSP 1 Score: 137.5 bits (345), Expect = 4.2e-29
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  MYSWSRLPIKRVSKLVLIWLKPPLICASHGALASIPCLGVLRDKYIRHTSDLLLRACNSK 60
          MYSWSRLPIKRVSKLVLIWLKPPLICASHGALASIPCLGVLRDKYIRHTSDLLLRACNSK
Sbjct: 1  MYSWSRLPIKRVSKLVLIWLKPPLICASHGALASIPCLGVLRDKYIRHTSDLLLRACNSK 60

Query: 61 VAGDS 66
          VAGDS
Sbjct: 61 VAGDS 65

[Close]
BLAST of CsaV3_6G014870 vs. NCBI nr
Match: KAA0033389.1 (serine/threonine-protein kinase D6PKL2 [Cucumis melo var. makuwa])

HSP 1 Score: 92.4 bits (228), Expect = 1.5e-15
Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 0 

Query: 21  KPPLICASHGALASIPCLGVLRDKYIRHTSDLLLRACNSKVAGDS 66
           KPPLICASHGALASIPCLGV+RD YIRHTSDLLLR CNSKVAGDS
Sbjct: 415 KPPLICASHGALASIPCLGVIRDTYIRHTSDLLLRDCNSKVAGDS 459

[Close]
BLAST of CsaV3_6G014870 vs. ExPASy TrEMBL
Match: A0A0A0KB31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151720 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.0e-29
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1  MYSWSRLPIKRVSKLVLIWLKPPLICASHGALASIPCLGVLRDKYIRHTSDLLLRACNSK 60
          MYSWSRLPIKRVSKLVLIWLKPPLICASHGALASIPCLGVLRDKYIRHTSDLLLRACNSK
Sbjct: 1  MYSWSRLPIKRVSKLVLIWLKPPLICASHGALASIPCLGVLRDKYIRHTSDLLLRACNSK 60

Query: 61 VAGDS 66
          VAGDS
Sbjct: 61 VAGDS 65

[Close]
BLAST of CsaV3_6G014870 vs. ExPASy TrEMBL
Match: A0A5A7SW31 (Serine/threonine-protein kinase D6PKL2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00390 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 7.4e-16
Identity = 42/45 (93.33%), Postives = 43/45 (95.56%), Query Frame = 0 

Query: 21  KPPLICASHGALASIPCLGVLRDKYIRHTSDLLLRACNSKVAGDS 66
           KPPLICASHGALASIPCLGV+RD YIRHTSDLLLR CNSKVAGDS
Sbjct: 415 KPPLICASHGALASIPCLGVIRDTYIRHTSDLLLRDCNSKVAGDS 459

The following BLAST results are available for this feature:
BLAST of CsaV3_6G014870 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46935.14.2e-29100.00hypothetical protein Csa_020610 [Cucumis sativus][more]
KAA0033389.11.5e-1593.33serine/threonine-protein kinase D6PKL2 [Cucumis melo var. makuwa][more]
BLAST of CsaV3_6G014870 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G014870 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KB312.0e-29100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151720 PE=4 SV=1[more]
A0A5A7SW317.4e-1693.33Serine/threonine-protein kinase D6PKL2 OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
BLAST of CsaV3_6G014870 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G014870.1CsaV3_6G014870.1mRNA