CsaV3_6G014820 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G014820
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 10749003 .. 10751844 (+)
RNA-Seq ExpressionCsaV3_6G014820
SyntenyCsaV3_6G014820
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTTAAGTACTTTGTTTTATAATTCCCGAATGCAAAGGTGAAACTTCAAAGAGGAATTCCAGTTCACACTCCAATTGATCCATCTCAAAAGAAAAGAAATGCTGAATTTGTCTCCCAATTCAGTGTAAGCAGTGAGGAATTTGACCAGTTTGAGAAATCAGATGAAATAGAAAAGCAAAACCAGCAGCTGAACAACAAAATTTGGATTGTTTATCTCAAGCTCAACTTTGTGAAGTTCCAGCCCATCTAAAGTCATTGGTAGCCAGTTGCAATCTGATTATGGGCTAATATCGAGCTGTTAGAGTGGTCCTGATTTGATGGCAATTTTCAATTTTCAGCTTCAGCAATAGGCTTGGAAAGTGTTTGGAGAAGCTTATTATTTGAAAGAAAGATATTTTTGGAATGAGTTAGCCAAAGAAAAGTATACAAAATTCACTCCGTCAATTCCCACTTAAACAAAAATTCTAAACATTAATAGGATTTATTTATGTACTATAAACTTTGTCAAAATAGTAAAAGTAGTAGTAGTTCAAAATATCAAAACTCAAACCTTTATAACTTTTGAGAATGAAGCAAACTAATATTATTCTTCTAATCATTACAGTTTTCACCAAAGCATAAACCTCGTATGTTTCATCAAAAGCATAAATCTCGGGGCTAAAAGTTAGTCTTCCTTAGAGGCAAGTCAGGCATAAATCTCTCAATAGCTTATTAAAGCATTTTGGCCCCAGCCCCACATGCCAGAAACATCTAAGTGCATCGGTTGTTTACTTTAGTAACCATAAAATAACTTCTAAGAACGATATTAATCTTCATCATCAAACAAATACAAGCCAAAATCCTTACCCCTTCCCAGACATCTTTATTCCCAATTATCACTGTTTTCTCATTGTGGTTTCCTTGATTGAACACACCGCTTATCATGAGACAAGTACTAACCCTCTATTGCAGGAACCAGGAGTTAGGCTCTAGAAAAGACACACACATGTTACATTGGTTGCAGCTGGATTTATAAGATAAAGAAACATTCTGATGGCTCTTAGCGAACGATATAAAGTACAACTTGTAGCAAAAGGATATTCTAAAAATTAGAGACTTTTGCCCCTTTAGCTTGAATGATATTTGTTCGATGTCTCTTAGCGGTAGCTACTGCCATACAGTGGTCCCTCTTCAAATGGATGTCAAGAATGCATTTCTCAATGGGACCTTAATTGAGGAAGTTTAGCTTGTATGAAAACATCTCCAACTACTTCTCTTCCACCCCAAAAGGTGTGTCTTCTTCGTCGTGCATTATATGGTCTAAAACAGGCTCCGTGAGCTTGGATTGCAACCTTTAGTTCTACAATTATCCAATTTGGGTTTAAGTCAAGTCCACATGATACAACTCTCTTTACACGCAAAACATCTGACAATATTATTCTGCTTCTGCTATATGTTGATGATATGATTACTATTATTGGCGATGATCCTTAAGTCTATATCTGATTTACAACATTACCTTGGGAAACACTTTGAGATGAAAGACTTAGGAGCACTTAATTGCTTTCTTGGGCGTGAGGTATCAACTGTGCCCTGAAGGTTGTTTGATAGTATGAGGTTCCATCTCAAAACCAATTGGTAATAAGAGGAGTAGTCCATCTATATTATATGGAGTGTGAGTCTCCTTAATTTTTTTCAATGTAGGACTCTTAACATCTCCAACATGGTCCCTCAAGATGGTGCCTCTTTGATTTCACCTATCTTGAACCGAATACTCGTTTGGATTTAATGAGATCTAATACCATGTTTAATAGTATGAGGTCTCATCTCAAAACCAATTGGCAATGAGATGAGTAACCCATTTAAAATATATGAAGTGTGAATCTCCTTGATTTTTCCAATGTGGGACTCTTAACATCTCCAACACTTGGTGTTATCCCAAGCAAAATGTCTCTTATCTTTTGGCTTGCTCAGGCACCACTGATTCTGCCACGGCGCCAACATCACCCAATCCCATTGTTCATCAAACTTCGTTTGATGGTGTTCCTCTAAAAGATGCTAGTCTATACAGTCAACTTGTTGGTAGCCTTATTTATCTGACTGTGACTCGTCCGGACATTGCATATTTTGACTCCACGGACCGTACATTTTACTGCAGTTCTTTGAATTCTTTGTTATATCAAGGGTACTCTAGGACACGAAGTTCAGTTCTCTTCTAAGTCATCTTTAGTATTATCTAGCGATAGATGATGTGACTAGCCTCCAAATATTGCATCTATTATTTATTCTTGATTGAACATTGTAACTGAATCAGATTAATCAATAATATATTTGTCTATTATCATTGAGAAAAATTAAGGCTGATGTTTTATTTGGTTTCTTCCTCAGGCAAGGACGAGCTGGACTGTGGTGGTTTCTTCCTCAGGAAAAGGCGAGTTGGACCTCGGATTTGGACAAAAGGATCCAGATGGCACAAATGTGTGAGCAGGACACAGTGTTTGCGGCGGAGATCGGATGCTGACAACGGATCTAATTTTGGTTGAGACTAGAGATCCAAAGATATGAGCTTGATGGATTCTTATGCAGCAGAGACAACAGAGCCGAGTGGAAATGACTGGGCTGCGACGAATCTAGGCAGAGCAAGTGGTGCGGGGTAGCTGTATTAAGACCTAGAAATGTGACTCTGATACCATGTTCTTTTTACCAGAATGATTGTTTTTTGTACAAGCAGTGAATGGGGAGTTGAATACTAAAACAACAAAGAAAAATATAATTATAAATAAGAATCTCTAATTTCTTTCAGTTTACCTAAATTACGTTCACAATGGAAATAAATCAAAATCTAGTAACTTCTATTTCTCC

mRNA sequence

ATGTTTTATTTGGTTTCTTCCTCAGGCAAGGACGAGCTGGACTGTGGTGGTTTCTTCCTCAGGAAAAGGCGAGTTGGACCTCGGATTTGGACAAAAGGATCCAGATGGCACAAATGTGTGAGCAGGACACAGTGTTTGCGGCGGAGATCGGATGCTGACAACGGATCTAATTTTGGTTGA

Coding sequence (CDS)

ATGTTTTATTTGGTTTCTTCCTCAGGCAAGGACGAGCTGGACTGTGGTGGTTTCTTCCTCAGGAAAAGGCGAGTTGGACCTCGGATTTGGACAAAAGGATCCAGATGGCACAAATGTGTGAGCAGGACACAGTGTTTGCGGCGGAGATCGGATGCTGACAACGGATCTAATTTTGGTTGA

Protein sequence

MFYLVSSSGKDELDCGGFFLRKRRVGPRIWTKGSRWHKCVSRTQCLRRRSDADNGSNFG*
Homology
[Close]
BLAST of CsaV3_6G014820 vs. NCBI nr
Match: KGN46930.1 (hypothetical protein Csa_020711 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 1.2e-27
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0 

Query: 1  MFYLVSSSGKDELDCGGFFLRKRRVGPRIWTKGSRWHKCVSRTQCLRRRSDADNGSNFG 60
          MFYLVSSSGKDELDCGGFFLRKRRVGPRIWTKGSRWHKCVSRTQCLRRRSDADNGSNFG
Sbjct: 1  MFYLVSSSGKDELDCGGFFLRKRRVGPRIWTKGSRWHKCVSRTQCLRRRSDADNGSNFG 59

[Close]
BLAST of CsaV3_6G014820 vs. ExPASy TrEMBL
Match: A0A0A0KB25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151670 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.9e-28
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0 

Query: 1  MFYLVSSSGKDELDCGGFFLRKRRVGPRIWTKGSRWHKCVSRTQCLRRRSDADNGSNFG 60
          MFYLVSSSGKDELDCGGFFLRKRRVGPRIWTKGSRWHKCVSRTQCLRRRSDADNGSNFG
Sbjct: 1  MFYLVSSSGKDELDCGGFFLRKRRVGPRIWTKGSRWHKCVSRTQCLRRRSDADNGSNFG 59

The following BLAST results are available for this feature:
BLAST of CsaV3_6G014820 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46930.11.2e-27100.00hypothetical protein Csa_020711 [Cucumis sativus][more]
BLAST of CsaV3_6G014820 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G014820 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KB255.9e-28100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G151670 PE=4 SV=1[more]
BLAST of CsaV3_6G014820 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G014820.1CsaV3_6G014820.1mRNA