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CsaV3_6G014640 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GACTAATTAATCCATTTACTTAGTACAAAAAAATGTCAATTTCAACTCTGAAAAATGTACAATTTAAACAAAATAAAAACAATTAATGAATAAAAATAAAATAGAATTTGCCAAAAGGGGTTTTCTATTAGAACGAATTATATTAACTTTTGCACTAACAAAGCCATTAGTATTTAAAACCCTAAACCAATTAAATACAATTGAATTTCCAAAGTTTCAAGATAACCAATACATTCTTCAACTTCGTTTCCATGGAGCTTCGACCCCCTGGTAACTTCATGGTTAGACATGAATCTTCGGATAGTGATAATATCGGTGATGGAGAAATCGACGAGGAATTTAGACATGGTGAACTGAGCGCCGAGAAGCAAATTTCGATGAAAAAGAGAAAAGGAAGGCCGAGGAAATTTAACGACGCCGTCGACCGCCGAGATCCACAGTCCACTCCAGACTCACAAACCAAACCCGAACGCCGTCGTGGCCCCCGCCCTGGTCTCAGTATATCGCAGGTTCTCGCAACGTTAGGTACGTACGCTAGCGATTATTCTTGTTTCTTTCCATCGCTCGCCCCCTCCTCCGCCGTAACCGTTAGTTTCTTTTCTTTCTTTCTTTTACGTCATTTTCTTTTTACTTTTCATTTCTTTCCCTTCTTTCTTTAATTTATTATTATTATTTTTCTTCTAAAACTTAAACTACAAATTTAGAAATATATAATAAAACCTAAAGATTTCGAATATTGATCAAATTGCATGAACTAAATTTTAACTACAAGATTGAAGTACAATAAAAAATAAAAATTGGTTGATTTGGTTAAATAGTAATCACTGCTCCTTTCCTTGTAATAAATAATGATTAAATTAAGAAGTTCTTATAGCAAATAGAAAAAAATTAAAATTATTTATCCAATATTCTTTTTAATAAAAATAAACTAATTTGTTATATTTATAATAACTAAGGTTGTTACGCATGGGAGACAATTGGGAGAGATTTTATCCCTCAGGTCGTTCTCGTTGCACCTAGAGAGGTAAGTATATTTTAAGTGTATGTTTCTATTAATGTTATAGATAGATATTCACTAAAAGTTCACGTGAAATTTTGTTATATTTTATAAATATTTTAATTTATTTTACTATGTTTGTAAATGTTCCATAAGTAATCTTACTATGATTTAAATTTTTAAAAAAAAATTATTAATAATGTGGTATATATTTAATTTTGAGTGTGTGACAGAATATTGTGGATAGAATATCAAACTTCAAAGTGCCAGGACGTCGATCAATTTGCATAATTTCTGCTTATGGTTCAGTTTCGTCTGTTATTATCCATAAACCCAATACTGTTGCCTCAATACTTAGATTCGAGGTGTTCATCTTCTTTACTCACTTATCTATATATCAATTCTTTTTCATTATTTGAAACATTATTTCTCTTTTATTCTGGTAATTCCTAGTTTTAATTTTAATTTTAATTTTATGTTTTATTGAATATATAACTAATCATATATAATATAATTTATGTGTGTAATTATAGGGTATATTTGAGATATTACAACTGTCTGGATGGTTTGATGGAAGAGATAATAAAAAACAGATGGCTATATCATTTTCTACATCCAATGGCCAAGTTTTTGGTGGCATCATCGTCCGTTCACGACTCATAGCAGCAACTCCGGTTCAGGTAGAGTAAGATAATATATTCATATTTGCAAACATGTGTTTAACAAATAGTTTGAATTTTATTTATTAAAAGTCATAAAAATTCAATATGCAATAGGTTTTCATATTATCCGATTTCAAACCGTAAAATTTTGAACCAATATTTTTATTTTATAAAGATTTTGAGTTTGAAATTTTAGTTGCACAATTGTTTCAAAGAGATGAATAGTAAAAGTATTGTAAACTGGTTTCTTTTTTTTTCTTCTAAATATAACAAATATTGTGTAATATATTATAAATGATATAATATTACAAAATAATAATGATATGGTTTAAAAGAAACATAAATCATAATAAATTAATAATAATTTAATATCAATTAACTACTCAACTAAATTTTAGTGTGTAGGTACCACCAGGTAGTTTTATGATTTATAATTTTAGACTATCATTGAATTATACTCTACTTTCATTTATGATACTTGTAATCTTTTTAACTTGAATGTTGATGTCTACGTATAATTAAAATAGAATCAAATAGATACAAAAATTAAACGTTTGTAAGGAAAATATTGAGATGTTTCAACCTTATTCTCTCCTATAAGTGATGTAAAATTTTACCTCTTCTTCCTAGAAGTTCTTTTTGCCCAATTGATTGAGATTATAATATGTAATGAATTTTAGTGTGTAAACAGATAATTGTGGGAAGTTTCATTATCCAAAATTAAATTGATGGAGTACTAAGCCCACACGTCACAAGGTATGGTTTCTTTGTTTAATTTAATCCATAGCTTGGTACTAAAGATTTGTGAAAATGGAGGAACCAAATTCAAATGAAAACTAAAAATGTAGAATTTTATCATAGTATTATATATTTCCATCATAATATAATATGATGGTTAAATACTACTCTAAAAAAATCAATTTACTTAGTATGCTTTTAAATTTAATTTAATTTAATTTAGATACGGTCTTAAATTTTTTACATTTTAATTAATGTATTTAAAAATCATTGTTATTTGGCCGTTTGTTAATTTGCTGAGTTGTTTTAACGTGAAATTTAGATAACCAACAAGAAATCAATTAGCTAATTTATAGAGAAAAATTTAGATAAAAGAGAAGAGGAAAATGAAATACAATAATGAAAATGGTTATTTAAAAAGAAGTATAAATAAACTCCATAATAAATAAAATAATATTTTAAAAATTCAAAGAATAAATCGAATATGTTGAAATTTATAGACGAAATGGACAAAAACTAAAAAACGTACAATAATAAAATAAGTATTTAAAATTATATAATTATTGTTATCAAATATTTTTTAAAATAATAAAATATTAAAATTATTTACGAAATATAGCAAATTCCATCCCCAAATAATTAAATTTTAAGGAAAATAATCCTTGAATTGCATGCAGAGCAGGCCAAAGAAGAAGAAAGAATTTTGTAACGATTCCATCTCTTCGCTTTAAACTACCAAAGGGTGCGGTTTCTTTTACTCTTTTTAATTACCACAAAACTTTTGAACGGTAGAAAGTAAAAAGTTCAATGTAAAATAATTATGTTGTCAATTTGTAATGAAACTTCTCCCATTTCTAGATCAACTCTTTATTATATACAAATACGTACATACAACTCTTTTCAAGATTCCAAATTACTAGAAAAGAAGTTATATTATATACA ATGGAGCTTCGACCCCCTGGTAACTTCATGGTTAGACATGAATCTTCGGATAGTGATAATATCGGTGATGGAGAAATCGACGAGGAATTTAGACATGGTGAACTGAGCGCCGAGAAGCAAATTTCGATGAAAAAGAGAAAAGGAAGGCCGAGGAAATTTAACGACGCCGTCGACCGCCGAGATCCACAGTCCACTCCAGACTCACAAACCAAACCCGAACGCCGTCGTGGCCCCCGCCCTGGTCTCAGTATATCGCAGGTTCTCGCAACGTTAGGTTGTTACGCATGGGAGACAATTGGGAGAGATTTTATCCCTCAGGTCGTTCTCGTTGCACCTAGAGAGAATATTGTGGATAGAATATCAAACTTCAAAGTGCCAGGACGTCGATCAATTTGCATAATTTCTGCTTATGGTTCAGTTTCGTCTGTTATTATCCATAAACCCAATACTGTTGCCTCAATACTTAGATTCGAGGGTATATTTGAGATATTACAACTGTCTGGATGGTTTGATGGAAGAGATAATAAAAAACAGATGGCTATATCATTTTCTACATCCAATGGCCAAGTTTTTGGTGGCATCATCGTCCGTTCACGACTCATAGCAGCAACTCCGGTTCAGATAATTGTGGGAAGTTTCATTATCCAAAATTAA ATGGAGCTTCGACCCCCTGGTAACTTCATGGTTAGACATGAATCTTCGGATAGTGATAATATCGGTGATGGAGAAATCGACGAGGAATTTAGACATGGTGAACTGAGCGCCGAGAAGCAAATTTCGATGAAAAAGAGAAAAGGAAGGCCGAGGAAATTTAACGACGCCGTCGACCGCCGAGATCCACAGTCCACTCCAGACTCACAAACCAAACCCGAACGCCGTCGTGGCCCCCGCCCTGGTCTCAGTATATCGCAGGTTCTCGCAACGTTAGGTTGTTACGCATGGGAGACAATTGGGAGAGATTTTATCCCTCAGGTCGTTCTCGTTGCACCTAGAGAGAATATTGTGGATAGAATATCAAACTTCAAAGTGCCAGGACGTCGATCAATTTGCATAATTTCTGCTTATGGTTCAGTTTCGTCTGTTATTATCCATAAACCCAATACTGTTGCCTCAATACTTAGATTCGAGGGTATATTTGAGATATTACAACTGTCTGGATGGTTTGATGGAAGAGATAATAAAAAACAGATGGCTATATCATTTTCTACATCCAATGGCCAAGTTTTTGGTGGCATCATCGTCCGTTCACGACTCATAGCAGCAACTCCGGTTCAGATAATTGTGGGAAGTTTCATTATCCAAAATTAA MELRPPGNFMVRHESSDSDNIGDGEIDEEFRHGELSAEKQISMKKRKGRPRKFNDAVDRRDPQSTPDSQTKPERRRGPRPGLSISQVLATLGCYAWETIGRDFIPQVVLVAPRENIVDRISNFKVPGRRSICIISAYGSVSSVIIHKPNTVASILRFEGIFEILQLSGWFDGRDNKKQMAISFSTSNGQVFGGIIVRSRLIAATPVQIIVGSFIIQN* Homology
BLAST of CsaV3_6G014640 vs. NCBI nr
Match: XP_031743816.1 (AT-hook motif nuclear-localized protein 7 [Cucumis sativus] >XP_031743817.1 AT-hook motif nuclear-localized protein 7 [Cucumis sativus] >KAE8646901.1 hypothetical protein Csa_020759 [Cucumis sativus]) HSP 1 Score: 428.3 bits (1100), Expect = 3.9e-116 Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0
BLAST of CsaV3_6G014640 vs. NCBI nr
Match: XP_008458633.1 (PREDICTED: AT-hook motif nuclear-localized protein 2-like isoform X1 [Cucumis melo] >XP_008458634.1 PREDICTED: AT-hook motif nuclear-localized protein 2-like isoform X1 [Cucumis melo]) HSP 1 Score: 246.5 bits (628), Expect = 2.1e-61 Identity = 138/214 (64.49%), Postives = 157/214 (73.36%), Query Frame = 0
BLAST of CsaV3_6G014640 vs. NCBI nr
Match: KAA0033366.1 (AT-hook motif nuclear-localized protein 2-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 236.1 bits (601), Expect = 2.8e-58 Identity = 131/208 (62.98%), Postives = 151/208 (72.60%), Query Frame = 0
BLAST of CsaV3_6G014640 vs. NCBI nr
Match: XP_008458631.1 (PREDICTED: AT-hook motif nuclear-localized protein 9-like isoform X1 [Cucumis melo]) HSP 1 Score: 233.4 bits (594), Expect = 1.8e-57 Identity = 134/223 (60.09%), Postives = 162/223 (72.65%), Query Frame = 0
BLAST of CsaV3_6G014640 vs. NCBI nr
Match: KAA0033371.1 (AT-hook motif nuclear-localized protein 9-like isoform X1 [Cucumis melo var. makuwa] >TYJ96655.1 AT-hook motif nuclear-localized protein 9-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 225.3 bits (573), Expect = 5.0e-55 Identity = 129/217 (59.45%), Postives = 156/217 (71.89%), Query Frame = 0
BLAST of CsaV3_6G014640 vs. ExPASy Swiss-Prot
Match: Q4V3E0 (AT-hook motif nuclear-localized protein 7 OS=Arabidopsis thaliana OX=3702 GN=AHL7 PE=2 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 9.3e-20 Identity = 69/192 (35.94%), Postives = 103/192 (53.65%), Query Frame = 0
BLAST of CsaV3_6G014640 vs. ExPASy Swiss-Prot
Match: O80834 (AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana OX=3702 GN=AHL9 PE=2 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.2e-19 Identity = 67/185 (36.22%), Postives = 106/185 (57.30%), Query Frame = 0
BLAST of CsaV3_6G014640 vs. ExPASy Swiss-Prot
Match: Q8L7L5 (AT-hook motif nuclear-localized protein 11 OS=Arabidopsis thaliana OX=3702 GN=AHL11 PE=2 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 6.6e-18 Identity = 62/183 (33.88%), Postives = 102/183 (55.74%), Query Frame = 0
BLAST of CsaV3_6G014640 vs. ExPASy Swiss-Prot
Match: Q8GXB3 (AT-hook motif nuclear-localized protein 5 OS=Arabidopsis thaliana OX=3702 GN=AHL5 PE=1 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.9e-17 Identity = 66/195 (33.85%), Postives = 98/195 (50.26%), Query Frame = 0
BLAST of CsaV3_6G014640 vs. ExPASy Swiss-Prot
Match: Q8VYJ2 (AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL1 PE=1 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 4.3e-17 Identity = 54/153 (35.29%), Postives = 89/153 (58.17%), Query Frame = 0
BLAST of CsaV3_6G014640 vs. ExPASy TrEMBL
Match: A0A1S3C8W2 (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103497979 PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 1.0e-61 Identity = 138/214 (64.49%), Postives = 157/214 (73.36%), Query Frame = 0
BLAST of CsaV3_6G014640 vs. ExPASy TrEMBL
Match: A0A5A7STP4 (AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00150 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 1.4e-58 Identity = 131/208 (62.98%), Postives = 151/208 (72.60%), Query Frame = 0
BLAST of CsaV3_6G014640 vs. ExPASy TrEMBL
Match: A0A1S3C8E7 (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103497978 PE=4 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 8.9e-58 Identity = 134/223 (60.09%), Postives = 162/223 (72.65%), Query Frame = 0
BLAST of CsaV3_6G014640 vs. ExPASy TrEMBL
Match: A0A5D3BDW3 (AT-hook motif nuclear-localized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26G00210 PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 2.4e-55 Identity = 129/217 (59.45%), Postives = 156/217 (71.89%), Query Frame = 0
BLAST of CsaV3_6G014640 vs. ExPASy TrEMBL
Match: A0A0A0KBM8 (AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_6G150520 PE=4 SV=1) HSP 1 Score: 204.9 bits (520), Expect = 3.4e-49 Identity = 123/219 (56.16%), Postives = 149/219 (68.04%), Query Frame = 0
BLAST of CsaV3_6G014640 vs. TAIR 10
Match: AT4G00200.1 (AT hook motif DNA-binding family protein ) HSP 1 Score: 98.6 bits (244), Expect = 6.6e-21 Identity = 69/192 (35.94%), Postives = 103/192 (53.65%), Query Frame = 0
BLAST of CsaV3_6G014640 vs. TAIR 10
Match: AT2G45850.1 (AT hook motif DNA-binding family protein ) HSP 1 Score: 98.2 bits (243), Expect = 8.6e-21 Identity = 67/185 (36.22%), Postives = 106/185 (57.30%), Query Frame = 0
BLAST of CsaV3_6G014640 vs. TAIR 10
Match: AT2G45850.2 (AT hook motif DNA-binding family protein ) HSP 1 Score: 98.2 bits (243), Expect = 8.6e-21 Identity = 67/185 (36.22%), Postives = 106/185 (57.30%), Query Frame = 0
BLAST of CsaV3_6G014640 vs. TAIR 10
Match: AT3G61310.1 (AT hook motif DNA-binding family protein ) HSP 1 Score: 92.4 bits (228), Expect = 4.7e-19 Identity = 62/183 (33.88%), Postives = 102/183 (55.74%), Query Frame = 0
BLAST of CsaV3_6G014640 vs. TAIR 10
Match: AT1G63470.1 (AT hook motif DNA-binding family protein ) HSP 1 Score: 90.9 bits (224), Expect = 1.4e-18 Identity = 66/195 (33.85%), Postives = 98/195 (50.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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