CsaV3_6G014400 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G014400
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Superoxide dismutase [Cu-Zn]
Location	chr6: 10443370 .. 10447636 (+)
RNA-Seq Expression	CsaV3_6G014400
Synteny	CsaV3_6G014400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTACAATAGGACTAAATTTATAATTAAACCTCTTAATTGGGTTTGAGAGAAGACCTTTGAAGCCACGAGGGGTCGGGTGCGAAAGAGACATATCATATAAGCAGTTGGTTGCTGTAAAGTGGCGCACTCATATCTACTGGTAGCCTCCATTTTCAATCTCTCATTATCCCATTATCATCGACAGTACCCCATAGCTAATGCAAGCAGTTCTTGCAGCTATGGCCGCACAATCACTTCTATCTGTTTCCCTTTCCAACTACGTCGCATTGCCCCCATTCTCCAATTCTTCATCTTCATCTTCTCTTTCTCTCACCTCCTCTTTCCATGGCGCCTCTCTCAAACTCCCTCGCCACTCCCTCTCCCTCGCTGCCTCCGTTGCCCCAAAACCCCTTGCTATCGTCGCTGCCACCAAAAAAGCTGTCGCTGTCCTCAAGGGAACTTCCGCCGTTGAAGGCGTTGTCACGCTCACCCAAGAGGACGATGGTCTGTACACTTCTTACTGATTAGTTTTTGATTTACCCTAAGACTTGAGGAGGGTCTGAATCAATATTTAGTAATTTGCTTGTTTTTGGCTGTTTGAGTTAAATGGGTGCAGGAATTGGAATAGAAGTGGGTTTTTTATGCGTCTGGGTTATGAGATTGATATTGGCTTTGATTGAAATGTGATACGTATAAAGTGGGTTCTTAATTTTTGCCTGCATTTCGTTGTTCTTGACATTTTTTTGTCCTGATGTATTGACACGCACATAAGTTGACTTTTAACTTCAGGAGCATGATTGTATTGATTTTGTGACGTTTCCTTTCTCCCAGGGTCTGTTGTAACTATGTTTATTCTATGACCAATGAACTTGTGATGACTTTTCCCCGTCCGAAAATTACAATTTATAAGCACAATATTAGTAATAGTAACAAAGGTAACAATAATGAAGATGGCAATGGTAACGATAGTAGTAGTACTAATACTGTGATTCTGAAAAATGTTGTATTGTTTCTAGGTCCAACATCTGTCAATGTGCGTATTACCGGGCTCACCCCAGGTCTTCATGGATTCCATCTTGTAAGTAATTGCACTGAGGCTGCCATCATCCATGGGCTTTGTTGCAAATTCAACCAGCTAGTTGAATGTCTGAAATGTTGTTTTAATCAATACCCCTTTGTATTTCTTCGTGTAGCATGAATTTGGAGACACAACAAATGGATGCATTTCTACAGGTAGTGCATGATCCCATGTTCATTTTTGAGCTAGATATAGCATCAAGAAGTTCTTGCCAGTGTGGTTGTATTTTTGTACAAGTTCATCCGTGCTTCTCATTTGTTGTTATTTATTTTCAACTGTAGGAGCACATTTCAATCCTAACAAGTTAACGCATGGTGCTCCCGAGGACGAAATCCGACATGCGGGTGACCTGGGAAACATAACTGCCAATGCTGATGGTATATGCTTTTCTTCTTTCTTCTTTGATAGATGCATCATTTTATGTTTCATAAATTCATAGCTTCTAATTCACCGTTGCAATGTTTTTTGATATACAGGAGTAGCAGAGGCAATCATTGTAGATAACCAGGTGCGACTTTGAGTATTGTTTCTATTATTTTATCCATATATGTCATCAATCATCATCACAACTCACATACTCAGAACCACCATGAATGGACATTGTAATAAGTAATAACTATTAATGTTGGTAGTGGCAGTGTTGCTGGGAGAGGTTTTTGTGTATATGATACATGCATATCTATCCCTTCAGACTGCAGCTACCTTATTATCAACAAATTTAAAACAAAATAATGTTCAAGCCTTTATTTTAGATCTACCCCTCTAACATACCCAGTTATTAATTCCTTTATCTGTAGATTCCTCTTAGCGGCCCCTATTCTGTAGTTGGAAGAGCCTTTGTGGTACATGAGCTTGAGGATGATCTAGGAAAAGGTATGTTCAATTCATTGTTTCCGTTTAATTACATGTTTGACACGTACTTTTCTCTTGTCATTTGATCAACCTACTTAATCGATTTATCATACAGAGATACTGACTAAGAGAATTTAATTTAATTAATTTATTTTCTTGTTATCTTATCTTCATTAAACTAAACAGATTAAGCTATTAGTATTATTAATTCAATTATGGAAAAAGAGATTTTAATTCTCTTTATAGATAGAGCCTATTAGCCGTTGATAGCGACATTTGCATTATTTAACTGGGGTTTTCTTTCTTCCACTATCAAATTTAAATTTTTCTGGTTATGATTATGTAGGAGGTCATGAACTCAGTTTAACCACTGGCAATGCGGGTGGAAGATTGGCATGTGGTACGCGGACTAAAAGATCTTTTTTCTTCTCTCAAGAGTCCATAGTTCCTTTTTTCTCCACACTTCACTACTATATTTCTAAGATAGCTTAATTTGTTCATTTTAAATAAGTGATAAACATGGGTGAATAAACTTCATTGAGCACTTCCTCACGAATTTCATTCATATCTCATATCATCCTAACCTCTGCTCAAAGATGCAAAGAGATCCATAGCTTCATTTAAATTATTTATTCCAGGTCTTGTGCTGTTAAGTGTTATGCATACCTCATGCCATGTATGTGATTTGTTAAACTAATTTGCTTTGAATACTGATTGTACTCTGCTCAAAGATGCATGAAGAGGTATAACTTTATTTATAATTCTTAGTCCAGGGCTTTCTCATATCTATTTTGTTTTAATGCATACCTCAGGCCATGTGTGTGATTTGCTAAACTAAGTTACCTTTGCATACTGATTGACCTCTGCTCAAAGATGCACGAAGATTTATAACTTTATTTAAAATTCTTAGTCCAGGGCTTTCTCATTTCTATTTTATTATGTATACCTCAGACCATGTGTGTGATTTGCTAAACTAAGTTATCTTTGCATACTGATTGACCTCTGCTTAAAAAGATGCACGAAGTTTCATAACTCTATTTAAAAAAATTTGTCCAGGGATTTCTTATATCCATTTTGTTGTTATGTATACCTCAGGCCATGTGTGTGATTTCTTAAACTAATTTACCTATGCTCAAAGATGCATGAAGATTCATAACTTTATCTAAAATTCTTAGACTAGGGCTTTCTTATAACCATTTTGCTGTTGTGTGATTTGCTAAACCAAGCTACCTTCGTACTGATTGACCTCTGCTCGAAGATGCAAGGAGATCCATAGCTTTATTTAAATTATTAGTTCAGGGCTTTCTCATATTCATTTTGCTGTTATCTATACCTCATGCCATATGTGTGCATTTTAAGTTGCAAGGCAGGTAAGTGAGTAAAGTATATTTCAATTATCAGGCCCTTCGTGTAGGTAGATATGTGGTCTAAAATTATCTGCGCTGGCTATTTTTCTGCTCTGATAGCCTGGCATGACACTTTTCCACCTTTTTCTAGAAGACGTACTTTTGAATAGAAGCTAGAAAGTAGAACCTACTCAAGTTAAAAGAGTTCTGCAGAAAGAATCAGCATAACTCATGTGTAGCTGTTAATAATCTCTTAAATTAGCCACTAATCAACTGCAAATCTATTGCTTTGCTCGAGTGCCATTGACTGGCAAGAGTAAAATCCAGAAATTCCCTATTAGCTTCTAAGATGTCTAAATATTGTTAACTTGTAAAATATCAACCAGATTTGTGCTAAACTGCTAATTGGCCGATACAACAGATTCTCAATCTTGTTTTCATCTTTGCAGGTGTTGTCGGTCTTACTCCTGTGTGATGGTGACAAACAAACTGTGTAGCCTATGAGGTCGGTACGAGGTATATGGAAGCACTATTATATTGTCAACCACTTTTCCACAGTCTCGAGTTTCTTTTCTTTTGTTCAGCATATAAATTGTAGTCTTGGGAAGACAGTTTCTTCACATACTCATTGATACCTGTTACTGTGCTTTCCATTAGCTGAATAAAATTGACCTGCTGCTTGAGCTAATGTGTTTGAATAAAGATTTGTTAACTTCAGAGACTTTTGAAGAGATATGATGTTGACAATCCCTTTCACCTTGGCTGGATATCACACCGCACTCCTTTCCTCCATGTTTGAAATCTTTTAGAACTATAGTTATTAAAATAAGTAATTGCAATTCAATTTGAAGTTTAGTGTATGGTTCCACTTGCAATTCAATTTCATGTGGATTCCAAGTACTTGGCTCCAAGTTCATTACATGTGAAGGTAGCAATCCTTTGTTGTGGATGAGACACGTGGAAGGTGTTTTTGATGGCAATGTAATTCTTGTTGGAAAAGCCAAACAAAACC

mRNA sequence

ATGCAAGCAGTTCTTGCAGCTATGGCCGCACAATCACTTCTATCTGTTTCCCTTTCCAACTACGTCGCATTGCCCCCATTCTCCAATTCTTCATCTTCATCTTCTCTTTCTCTCACCTCCTCTTTCCATGGCGCCTCTCTCAAACTCCCTCGCCACTCCCTCTCCCTCGCTGCCTCCGTTGCCCCAAAACCCCTTGCTATCGTCGCTGCCACCAAAAAAGCTGTCGCTGTCCTCAAGGGAACTTCCGCCGTTGAAGGCGTTGTCACGCTCACCCAAGAGGACGATGGTCCAACATCTGTCAATGTGCGTATTACCGGGCTCACCCCAGGTCTTCATGGATTCCATCTTCATGAATTTGGAGACACAACAAATGGATGCATTTCTACAGGAGCACATTTCAATCCTAACAAGTTAACGCATGGTGCTCCCGAGGACGAAATCCGACATGCGGGTGACCTGGGAAACATAACTGCCAATGCTGATGGAGTAGCAGAGGCAATCATTGTAGATAACCAGATTCCTCTTAGCGGCCCCTATTCTGTAGTTGGAAGAGCCTTTGTGGTACATGAGCTTGAGGATGATCTAGGAAAAGGAGGTCATGAACTCAGTTTAACCACTGGCAATGCGGGTGGAAGATTGGCATGTGGTGTTGTCGGTCTTACTCCTGTGTGA

Coding sequence (CDS)

ATGCAAGCAGTTCTTGCAGCTATGGCCGCACAATCACTTCTATCTGTTTCCCTTTCCAACTACGTCGCATTGCCCCCATTCTCCAATTCTTCATCTTCATCTTCTCTTTCTCTCACCTCCTCTTTCCATGGCGCCTCTCTCAAACTCCCTCGCCACTCCCTCTCCCTCGCTGCCTCCGTTGCCCCAAAACCCCTTGCTATCGTCGCTGCCACCAAAAAAGCTGTCGCTGTCCTCAAGGGAACTTCCGCCGTTGAAGGCGTTGTCACGCTCACCCAAGAGGACGATGGTCCAACATCTGTCAATGTGCGTATTACCGGGCTCACCCCAGGTCTTCATGGATTCCATCTTCATGAATTTGGAGACACAACAAATGGATGCATTTCTACAGGAGCACATTTCAATCCTAACAAGTTAACGCATGGTGCTCCCGAGGACGAAATCCGACATGCGGGTGACCTGGGAAACATAACTGCCAATGCTGATGGAGTAGCAGAGGCAATCATTGTAGATAACCAGATTCCTCTTAGCGGCCCCTATTCTGTAGTTGGAAGAGCCTTTGTGGTACATGAGCTTGAGGATGATCTAGGAAAAGGAGGTCATGAACTCAGTTTAACCACTGGCAATGCGGGTGGAAGATTGGCATGTGGTGTTGTCGGTCTTACTCCTGTGTGA

Protein sequence

MQAVLAAMAAQSLLSVSLSNYVALPPFSNSSSSSSLSLTSSFHGASLKLPRHSLSLAASVAPKPLAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFGDTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYSVVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV*

Homology

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BLAST of CsaV3_6G014400 vs. NCBI nr
Match: XP_004145768.1 (superoxide dismutase [Cu-Zn], chloroplastic [Cucumis sativus] >KGN46887.1 hypothetical protein Csa_021019 [Cucumis sativus])

HSP 1 Score: 421.8 bits (1083), Expect = 3.7e-114
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MQAVLAAMAAQSLLSVSLSNYVALPPFSNSSSSSSLSLTSSFHGASLKLPRHSLSLAASV 60
           MQAVLAAMAAQSLLSVSLSNYVALPPFSNSSSSSSLSLTSSFHGASLKLPRHSLSLAASV
Sbjct: 1   MQAVLAAMAAQSLLSVSLSNYVALPPFSNSSSSSSLSLTSSFHGASLKLPRHSLSLAASV 60

Query: 61  APKPLAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFG 120
           APKPLAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFG
Sbjct: 61  APKPLAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFG 120

Query: 121 DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYS 180
           DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYS
Sbjct: 121 DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYS 180

Query: 181 VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 224
           VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV
Sbjct: 181 VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 223

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BLAST of CsaV3_6G014400 vs. NCBI nr
Match: XP_008465422.1 (PREDICTED: superoxide dismutase [Cu-Zn], chloroplastic [Cucumis melo])

HSP 1 Score: 397.1 bits (1019), Expect = 9.9e-107
Identity = 212/223 (95.07%), Postives = 215/223 (96.41%), Query Frame = 0


Query: 1   MQAVLAAMAAQSLLSVSLSNYVALPPFSNSSSSSSLSLTSSFHGASLKLPRHSLSLAASV 60
           MQAVLAAMAAQSLLSVSLSNY+ALPPFSN  SSSSLSLTSSFHGASLKLPRHSLSLAASV
Sbjct: 1   MQAVLAAMAAQSLLSVSLSNYIALPPFSN--SSSSLSLTSSFHGASLKLPRHSLSLAASV 60

Query: 61  APKPLAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFG 120
           APKPLA+VAA+KKAVAVLKGTS VEGVVTLTQEDDGPTSVNVRITGLTPG HGFHLHEFG
Sbjct: 61  APKPLAVVAASKKAVAVLKGTSDVEGVVTLTQEDDGPTSVNVRITGLTPGPHGFHLHEFG 120

Query: 121 DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYS 180
           DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNI ANADGVAEA IVDNQIPLSGP S
Sbjct: 121 DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNIIANADGVAEATIVDNQIPLSGPNS 180

Query: 181 VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 224
           VVGRAFVVHEL DDLGKGGHELSLTTGNAGGRLACGVVGLTPV
Sbjct: 181 VVGRAFVVHELADDLGKGGHELSLTTGNAGGRLACGVVGLTPV 221

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BLAST of CsaV3_6G014400 vs. NCBI nr
Match: KAA0037303.1 (superoxide dismutase [Cucumis melo var. makuwa])

HSP 1 Score: 382.5 bits (981), Expect = 2.5e-102
Identity = 204/216 (94.44%), Postives = 207/216 (95.83%), Query Frame = 0


Query: 1   MQAVLAAMAAQSLLSVSLSNYVALPPFSNSSSSSSLSLTSSFHGASLKLPRHSLSLAASV 60
           MQAVLAAMAAQSLLSVSLSNY+ALPPFSN  SSSSLSLTSSFHGASLKLPRHSLSLAASV
Sbjct: 1   MQAVLAAMAAQSLLSVSLSNYIALPPFSN--SSSSLSLTSSFHGASLKLPRHSLSLAASV 60

Query: 61  APKPLAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFG 120
           APKPLA+VAA+KKAVAVLKGTS VEGVVTLTQEDDGPTSVNVRITGLTPG HGFHLHEFG
Sbjct: 61  APKPLAVVAASKKAVAVLKGTSDVEGVVTLTQEDDGPTSVNVRITGLTPGPHGFHLHEFG 120

Query: 121 DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYS 180
           DTTNGCISTG HFNPNKLTHGAPEDEIRHAGDLGNI ANADGVAEA IVDNQIPLSGP S
Sbjct: 121 DTTNGCISTGTHFNPNKLTHGAPEDEIRHAGDLGNIIANADGVAEATIVDNQIPLSGPNS 180

Query: 181 VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACG 217
           VVGRAFVVHEL DDLGKGGHELSLTTGNAGGRLACG
Sbjct: 181 VVGRAFVVHELADDLGKGGHELSLTTGNAGGRLACG 214

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BLAST of CsaV3_6G014400 vs. NCBI nr
Match: XP_038902141.1 (superoxide dismutase [Cu-Zn], chloroplastic [Benincasa hispida])

HSP 1 Score: 380.2 bits (975), Expect = 1.3e-101
Identity = 203/223 (91.03%), Postives = 210/223 (94.17%), Query Frame = 0


Query: 1   MQAVLAAMAAQSLLSVSLSNYVALPPFSNSSSSSSLSLTSSFHGASLKLPRHSLSLAASV 60
           MQA+LAAMAAQSLLSVS S+Y+ LPPFSNSSS  S S  SSFHGASLKLPRHSLSLAASV
Sbjct: 1   MQAILAAMAAQSLLSVSPSHYIPLPPFSNSSSPPSPS--SSFHGASLKLPRHSLSLAASV 60

Query: 61  APKPLAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFG 120
           APKPLA+VAATKKAVAVLKGTS VEGVVTLTQEDDGPT+VNVR+TGLT GLHGFHLHE+G
Sbjct: 61  APKPLAVVAATKKAVAVLKGTSNVEGVVTLTQEDDGPTTVNVRVTGLTEGLHGFHLHEYG 120

Query: 121 DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYS 180
           DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNI ANA GVAEA IVDNQIPLSGP S
Sbjct: 121 DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNIIANAVGVAEATIVDNQIPLSGPNS 180

Query: 181 VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 224
           VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV
Sbjct: 181 VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 221

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BLAST of CsaV3_6G014400 vs. NCBI nr
Match: APO14279.1 (superoxide dismutase 3 [Luffa aegyptiaca])

HSP 1 Score: 378.6 bits (971), Expect = 3.6e-101
Identity = 199/223 (89.24%), Postives = 209/223 (93.72%), Query Frame = 0


Query: 1   MQAVLAAMAAQSLLSVSLSNYVALPPFSNSSSSSSLSLTSSFHGASLKLPRHSLSLAASV 60
           MQA+LAAMAAQ+L+S S S+Y+ALPPFSNSS     SLTSSFHGASLKLPRHSLSLAAS 
Sbjct: 1   MQALLAAMAAQTLISASPSHYIALPPFSNSSPPP--SLTSSFHGASLKLPRHSLSLAASA 60

Query: 61  APKPLAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFG 120
           APKPLA+VAATKKAVAVLKGTS V+GVVTLTQEDDGPT+VNVR+TGL  GLHGFHLHE+G
Sbjct: 61  APKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDDGPTTVNVRVTGLAEGLHGFHLHEYG 120

Query: 121 DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYS 180
           DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNI ANADGVAEA IVDNQIPLSGP S
Sbjct: 121 DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNIVANADGVAEATIVDNQIPLSGPNS 180

Query: 181 VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 224
           VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV
Sbjct: 181 VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 221

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BLAST of CsaV3_6G014400 vs. ExPASy Swiss-Prot
Match: O65199 (Superoxide dismutase [Cu-Zn], chloroplastic OS=Vitis vinifera OX=29760 GN=SODCP PE=2 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.7e-83
Identity = 164/216 (75.93%), Postives = 182/216 (84.26%), Query Frame = 0


Query: 8   MAAQSLLSVSLSNYVALPPFSNSSSSSSLSLTSSFHGASLKLPRHSLSLAASVAPKPLAI 67
           MA  +LLS + S       F N S + S  L S FHG SLKL R S+ LA   APKPL++
Sbjct: 1   MAVNTLLSTAPSR--VFLSFPNPSPNPSPQLHSQFHGLSLKLTRQSIPLA--TAPKPLSV 60

Query: 68  VAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFGDTTNGCI 127
           VA TKKAVAVLKGTS+VEGVVTL+QEDDGPT+V+VRITGLTPG HGFHLHEFGDTTNGC+
Sbjct: 61  VAVTKKAVAVLKGTSSVEGVVTLSQEDDGPTTVSVRITGLTPGNHGFHLHEFGDTTNGCM 120

Query: 128 STGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYSVVGRAFV 187
           STGAHFNPN +THGAPED++RHAGDLGNI ANA+GVAEA IVD QIPLSGP +V+GRA V
Sbjct: 121 STGAHFNPNGMTHGAPEDDVRHAGDLGNIIANAEGVAEATIVDTQIPLSGPNAVIGRALV 180

Query: 188 VHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 224
           VHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTP+
Sbjct: 181 VHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPI 212

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BLAST of CsaV3_6G014400 vs. ExPASy Swiss-Prot
Match: P10792 (Superoxide dismutase [Cu-Zn], chloroplastic OS=Petunia hybrida OX=4102 GN=SODCP PE=2 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 6.1e-83
Identity = 161/219 (73.52%), Postives = 185/219 (84.47%), Query Frame = 0


Query: 8   MAAQSLLSVSLSNYVALPPFSNSSSSSSLSLTSSFHGASLKLPR---HSLSLAASVAPKP 67
           MAA ++ + + +    L P ++S+++S+ SL+SSFHG SLK+      SL+L++  +PKP
Sbjct: 1   MAAHTIFTTTSTTNSFLFPIASSNTNSAPSLSSSFHGVSLKVKSKTPQSLTLSSVTSPKP 60

Query: 68  LAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFGDTTN 127
             + AATKKAVAVLKGTS VEGVVTLTQ+DDGPT+V VRITGL PGLHGFHLHEFGDTTN
Sbjct: 61  FIVFAATKKAVAVLKGTSNVEGVVTLTQDDDGPTTVKVRITGLAPGLHGFHLHEFGDTTN 120

Query: 128 GCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYSVVGR 187
           GC+STG HFNPN LTHGAP DE+RHAGDLGNI ANA GVAEA +VDNQIPLSGP SVVGR
Sbjct: 121 GCMSTGPHFNPNGLTHGAPGDEVRHAGDLGNIEANASGVAEATLVDNQIPLSGPNSVVGR 180

Query: 188 AFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 224
           A VVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTP+
Sbjct: 181 ALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPI 219

[Close]

BLAST of CsaV3_6G014400 vs. ExPASy Swiss-Prot
Match: O04997 (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solidago canadensis var. scabra OX=59294 GN=SODCP PE=2 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 6.7e-82
Identity = 170/221 (76.92%), Postives = 187/221 (84.62%), Query Frame = 0


Query: 8   MAAQSLLSVSLSNYVALP-PFSNSSSSSSLSLTSSFHGASLK--LPRHSLSL--AASVAP 67
           MAA  +L  S +   +L  P SN +++ SL  +SSFHG SLK  + R SL+L  AAS AP
Sbjct: 1   MAAHCILFSSPAATTSLIFPISNPNTAVSLP-SSSFHGVSLKSTINRQSLTLSAAASAAP 60

Query: 68  KPLAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFGDT 127
           KPL + AATKKAVAVLKGTS+VEGVVTLTQE+DGPT+VNV+ITGLTPG HGFHLHEFGDT
Sbjct: 61  KPLTVFAATKKAVAVLKGTSSVEGVVTLTQEEDGPTTVNVKITGLTPGPHGFHLHEFGDT 120

Query: 128 TNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYSVV 187
           TNGCISTG HFNPN  THGAPEDE RHAGDLGNI ANADGVAEA IVDNQIPL+GP +VV
Sbjct: 121 TNGCISTGPHFNPNGNTHGAPEDENRHAGDLGNIIANADGVAEATIVDNQIPLTGPNAVV 180

Query: 188 GRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 224
           GRAFVVHEL DDLGKGGHELSL+TGNAGGRLACGVVGLTPV
Sbjct: 181 GRAFVVHELADDLGKGGHELSLSTGNAGGRLACGVVGLTPV 220

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BLAST of CsaV3_6G014400 vs. ExPASy Swiss-Prot
Match: P14831 (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solanum lycopersicum OX=4081 GN=SODCP.2 PE=1 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 6.7e-82
Identity = 164/219 (74.89%), Postives = 181/219 (82.65%), Query Frame = 0


Query: 8   MAAQSLLSVSLSNYVALPPFSNSSSSSSLSLTSSFHGASLKLPR---HSLSLAASVAPKP 67
           MAA S+ + + +    L P   SSSSSS ++ SSF G SL +      SL+L A   PKP
Sbjct: 1   MAAHSIFTTTSTTNSFLYPI--SSSSSSPNINSSFLGVSLNVNAKFGQSLTLYAVTTPKP 60

Query: 68  LAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFGDTTN 127
           L + AATKKAVAVLKG S VEGVVTL+Q+DDGPT+VNVRITGL PGLHGFHLHE+GDTTN
Sbjct: 61  LTVFAATKKAVAVLKGNSNVEGVVTLSQDDDGPTTVNVRITGLAPGLHGFHLHEYGDTTN 120

Query: 128 GCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYSVVGR 187
           GC+STGAHFNPNKLTHGAP DEIRHAGDLGNI ANADGVAE  +VDNQIPL+GP SVVGR
Sbjct: 121 GCMSTGAHFNPNKLTHGAPGDEIRHAGDLGNIVANADGVAEVTLVDNQIPLTGPNSVVGR 180

Query: 188 AFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 224
           A VVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTP+
Sbjct: 181 ALVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPI 217

[Close]

BLAST of CsaV3_6G014400 vs. ExPASy Swiss-Prot
Match: P07505 (Superoxide dismutase [Cu-Zn], chloroplastic OS=Spinacia oleracea OX=3562 GN=SODCP PE=1 SV=2)

HSP 1 Score: 303.1 bits (775), Expect = 2.5e-81
Identity = 166/222 (74.77%), Postives = 186/222 (83.78%), Query Frame = 0


Query: 8   MAAQSLLSVSLSN--YVALPPFSNSSSS--SSLSLTSSFHGASLKL--PRHSLSLAASVA 67
           MAA ++L+ + S+  +  + PFS++ ++  SS   +SSF+G S KL     SLSL+ S A
Sbjct: 1   MAAHTILASAPSHTTFSLISPFSSTPTNALSSSLQSSSFNGLSFKLSPTTQSLSLSTSAA 60

Query: 68  PKPLAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFGD 127
            KPL IVAATKKAVAVLKGTS VEGVVTLTQEDDGPT+VNVRI+GL PG HGFHLHEFGD
Sbjct: 61  SKPLTIVAATKKAVAVLKGTSNVEGVVTLTQEDDGPTTVNVRISGLAPGKHGFHLHEFGD 120

Query: 128 TTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYSV 187
           TTNGC+STG HFNP+K THGAPEDE+RHAGDLGNI AN DGVAEA IVDNQIPL+GP SV
Sbjct: 121 TTNGCMSTGPHFNPDKKTHGAPEDEVRHAGDLGNIVANTDGVAEATIVDNQIPLTGPNSV 180

Query: 188 VGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 224
           VGRA VVHELEDDLGKGGHELS TTGNAGGRLACGVVGLTPV
Sbjct: 181 VGRALVVHELEDDLGKGGHELSPTTGNAGGRLACGVVGLTPV 222

[Close]

BLAST of CsaV3_6G014400 vs. ExPASy TrEMBL
Match: A0A0A0KEQ1 (Superoxide dismutase [Cu-Zn] OS=Cucumis sativus OX=3659 GN=Csa_6G148290 PE=3 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 1.8e-114
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0


Query: 1   MQAVLAAMAAQSLLSVSLSNYVALPPFSNSSSSSSLSLTSSFHGASLKLPRHSLSLAASV 60
           MQAVLAAMAAQSLLSVSLSNYVALPPFSNSSSSSSLSLTSSFHGASLKLPRHSLSLAASV
Sbjct: 1   MQAVLAAMAAQSLLSVSLSNYVALPPFSNSSSSSSLSLTSSFHGASLKLPRHSLSLAASV 60

Query: 61  APKPLAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFG 120
           APKPLAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFG
Sbjct: 61  APKPLAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFG 120

Query: 121 DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYS 180
           DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYS
Sbjct: 121 DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYS 180

Query: 181 VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 224
           VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV
Sbjct: 181 VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 223

[Close]

BLAST of CsaV3_6G014400 vs. ExPASy TrEMBL
Match: A0A1S3CNS3 (Superoxide dismutase [Cu-Zn] OS=Cucumis melo OX=3656 GN=LOC103503040 PE=3 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 4.8e-107
Identity = 212/223 (95.07%), Postives = 215/223 (96.41%), Query Frame = 0


Query: 1   MQAVLAAMAAQSLLSVSLSNYVALPPFSNSSSSSSLSLTSSFHGASLKLPRHSLSLAASV 60
           MQAVLAAMAAQSLLSVSLSNY+ALPPFSN  SSSSLSLTSSFHGASLKLPRHSLSLAASV
Sbjct: 1   MQAVLAAMAAQSLLSVSLSNYIALPPFSN--SSSSLSLTSSFHGASLKLPRHSLSLAASV 60

Query: 61  APKPLAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFG 120
           APKPLA+VAA+KKAVAVLKGTS VEGVVTLTQEDDGPTSVNVRITGLTPG HGFHLHEFG
Sbjct: 61  APKPLAVVAASKKAVAVLKGTSDVEGVVTLTQEDDGPTSVNVRITGLTPGPHGFHLHEFG 120

Query: 121 DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYS 180
           DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNI ANADGVAEA IVDNQIPLSGP S
Sbjct: 121 DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNIIANADGVAEATIVDNQIPLSGPNS 180

Query: 181 VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 224
           VVGRAFVVHEL DDLGKGGHELSLTTGNAGGRLACGVVGLTPV
Sbjct: 181 VVGRAFVVHELADDLGKGGHELSLTTGNAGGRLACGVVGLTPV 221

[Close]

BLAST of CsaV3_6G014400 vs. ExPASy TrEMBL
Match: A0A5A7T2V6 (Superoxide dismutase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3G00150 PE=3 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.2e-102
Identity = 204/216 (94.44%), Postives = 207/216 (95.83%), Query Frame = 0


Query: 1   MQAVLAAMAAQSLLSVSLSNYVALPPFSNSSSSSSLSLTSSFHGASLKLPRHSLSLAASV 60
           MQAVLAAMAAQSLLSVSLSNY+ALPPFSN  SSSSLSLTSSFHGASLKLPRHSLSLAASV
Sbjct: 1   MQAVLAAMAAQSLLSVSLSNYIALPPFSN--SSSSLSLTSSFHGASLKLPRHSLSLAASV 60

Query: 61  APKPLAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFG 120
           APKPLA+VAA+KKAVAVLKGTS VEGVVTLTQEDDGPTSVNVRITGLTPG HGFHLHEFG
Sbjct: 61  APKPLAVVAASKKAVAVLKGTSDVEGVVTLTQEDDGPTSVNVRITGLTPGPHGFHLHEFG 120

Query: 121 DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYS 180
           DTTNGCISTG HFNPNKLTHGAPEDEIRHAGDLGNI ANADGVAEA IVDNQIPLSGP S
Sbjct: 121 DTTNGCISTGTHFNPNKLTHGAPEDEIRHAGDLGNIIANADGVAEATIVDNQIPLSGPNS 180

Query: 181 VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACG 217
           VVGRAFVVHEL DDLGKGGHELSLTTGNAGGRLACG
Sbjct: 181 VVGRAFVVHELADDLGKGGHELSLTTGNAGGRLACG 214

[Close]

BLAST of CsaV3_6G014400 vs. ExPASy TrEMBL
Match: A0A1L5JHV7 (Superoxide dismutase [Cu-Zn] OS=Luffa aegyptiaca OX=3670 PE=2 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.8e-101
Identity = 199/223 (89.24%), Postives = 209/223 (93.72%), Query Frame = 0


Query: 1   MQAVLAAMAAQSLLSVSLSNYVALPPFSNSSSSSSLSLTSSFHGASLKLPRHSLSLAASV 60
           MQA+LAAMAAQ+L+S S S+Y+ALPPFSNSS     SLTSSFHGASLKLPRHSLSLAAS 
Sbjct: 1   MQALLAAMAAQTLISASPSHYIALPPFSNSSPPP--SLTSSFHGASLKLPRHSLSLAASA 60

Query: 61  APKPLAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFG 120
           APKPLA+VAATKKAVAVLKGTS V+GVVTLTQEDDGPT+VNVR+TGL  GLHGFHLHE+G
Sbjct: 61  APKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDDGPTTVNVRVTGLAEGLHGFHLHEYG 120

Query: 121 DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYS 180
           DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNI ANADGVAEA IVDNQIPLSGP S
Sbjct: 121 DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNIVANADGVAEATIVDNQIPLSGPNS 180

Query: 181 VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 224
           VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV
Sbjct: 181 VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 221

[Close]

BLAST of CsaV3_6G014400 vs. ExPASy TrEMBL
Match: A0A6J1K3P0 (Superoxide dismutase [Cu-Zn] OS=Cucurbita maxima OX=3661 GN=LOC111491386 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 3.4e-97
Identity = 195/223 (87.44%), Postives = 202/223 (90.58%), Query Frame = 0


Query: 1   MQAVLAAMAAQSLLSVSLSNYVALPPFSNSSSSSSLSLTSSFHGASLKLPRHSLSLAASV 60
           MQAVLAAMAAQSL+S S S+Y+ + PFS SS     SL SSFHGASLKLPRHSLSLAASV
Sbjct: 1   MQAVLAAMAAQSLISASPSSYIQVSPFSISSPPP--SLISSFHGASLKLPRHSLSLAASV 60

Query: 61  APKPLAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFG 120
           APKP  +VAATKKAVAVLKGTS VEGVVTLTQEDDGPT+VNVRITGLT GLHGFHLHE+G
Sbjct: 61  APKPFVVVAATKKAVAVLKGTSNVEGVVTLTQEDDGPTTVNVRITGLTEGLHGFHLHEYG 120

Query: 121 DTTNGCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYS 180
           DTTNGCISTG HFNPNKLTHGAPEDEIRHAGDLGNI A ADGVAEA IVDNQIPLSGP S
Sbjct: 121 DTTNGCISTGPHFNPNKLTHGAPEDEIRHAGDLGNIVAKADGVAEATIVDNQIPLSGPNS 180

Query: 181 VVGRAFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 224
           VVGRAFVVHELEDDLGKGGHELS TTGNAGGRLACGVVGLTPV
Sbjct: 181 VVGRAFVVHELEDDLGKGGHELSSTTGNAGGRLACGVVGLTPV 221

[Close]

BLAST of CsaV3_6G014400 vs. TAIR 10
Match: AT2G28190.1 (copper/zinc superoxide dismutase 2 )

HSP 1 Score: 295.4 bits (755), Expect = 3.8e-80
Identity = 159/219 (72.60%), Postives = 176/219 (80.37%), Query Frame = 0


Query: 9   AAQSLLSVSLSNYVALPPFSNSSSSSSLSLTSSFHGASL---KLPR-HSLSLAASVAPKP 68
           A  ++L+ S  + + +PP SN S     +L SSF G SL    L R  S+S A     K 
Sbjct: 3   ATNTILAFSSPSRLLIPPSSNPS-----TLRSSFRGVSLNNNNLHRLQSVSFAVKAPSKA 62

Query: 69  LAIVAATKKAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFGDTTN 128
           L +V+A KKAVAVLKGTS VEGVVTLTQ+D GPT+VNVRITGLTPG HGFHLHEFGDTTN
Sbjct: 63  LTVVSAAKKAVAVLKGTSDVEGVVTLTQDDSGPTTVNVRITGLTPGPHGFHLHEFGDTTN 122

Query: 129 GCISTGAHFNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYSVVGR 188
           GCISTG HFNPN +THGAPEDE RHAGDLGNI ANADGVAE  IVDNQIPL+GP SVVGR
Sbjct: 123 GCISTGPHFNPNNMTHGAPEDECRHAGDLGNINANADGVAETTIVDNQIPLTGPNSVVGR 182

Query: 189 AFVVHELEDDLGKGGHELSLTTGNAGGRLACGVVGLTPV 224
           AFVVHEL+DDLGKGGHELSLTTGNAGGRLACGV+GLTP+
Sbjct: 183 AFVVHELKDDLGKGGHELSLTTGNAGGRLACGVIGLTPL 216

[Close]

BLAST of CsaV3_6G014400 vs. TAIR 10
Match: AT1G08830.1 (copper/zinc superoxide dismutase 1 )

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-52
Identity = 98/148 (66.22%), Postives = 112/148 (75.68%), Query Frame = 0


Query: 73  KAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFGDTTNGCISTGAH 132
           K VAVL  +  V G +  TQE DG T+V+  ++GL PGLHGFH+H  GDTTNGC+STG H
Sbjct: 3   KGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTGPH 62

Query: 133 FNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYSVVGRAFVVHELE 192
           FNP+  THGAPED  RHAGDLGNIT   DG A   I D QIPL+GP S+VGRA VVH   
Sbjct: 63  FNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHADP 122

Query: 193 DDLGKGGHELSLTTGNAGGRLACGVVGL 221
           DDLGKGGHELSL TGNAGGR+ACG++GL
Sbjct: 123 DDLGKGGHELSLATGNAGGRVACGIIGL 150

[Close]

BLAST of CsaV3_6G014400 vs. TAIR 10
Match: AT1G08830.2 (copper/zinc superoxide dismutase 1 )

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-52
Identity = 98/148 (66.22%), Postives = 112/148 (75.68%), Query Frame = 0


Query: 73  KAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFGDTTNGCISTGAH 132
           K VAVL  +  V G +  TQE DG T+V+  ++GL PGLHGFH+H  GDTTNGC+STG H
Sbjct: 3   KGVAVLNSSEGVTGTIFFTQEGDGVTTVSGTVSGLKPGLHGFHVHALGDTTNGCMSTGPH 62

Query: 133 FNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYSVVGRAFVVHELE 192
           FNP+  THGAPED  RHAGDLGNIT   DG A   I D QIPL+GP S+VGRA VVH   
Sbjct: 63  FNPDGKTHGAPEDANRHAGDLGNITVGDDGTATFTITDCQIPLTGPNSIVGRAVVVHADP 122

Query: 193 DDLGKGGHELSLTTGNAGGRLACGVVGL 221
           DDLGKGGHELSL TGNAGGR+ACG++GL
Sbjct: 123 DDLGKGGHELSLATGNAGGRVACGIIGL 150

[Close]

BLAST of CsaV3_6G014400 vs. TAIR 10
Match: AT5G18100.1 (copper/zinc superoxide dismutase 3 )

HSP 1 Score: 190.7 bits (483), Expect = 1.3e-48
Identity = 89/148 (60.14%), Postives = 110/148 (74.32%), Query Frame = 0


Query: 73  KAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFGDTTNGCISTGAH 132
           +AVA++ G + V G +   Q+  G T V  +I+GL+PG HGFH+H FGDTTNGCISTG H
Sbjct: 9   RAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCISTGPH 68

Query: 133 FNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYSVVGRAFVVHELE 192
           FNP    HG P +E RHAGDLGNI A ++GVAE +I D  IPLSG YS++GRA VVH   
Sbjct: 69  FNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVVHADP 128

Query: 193 DDLGKGGHELSLTTGNAGGRLACGVVGL 221
           DDLGKGGH+LS +TGNAG R+ CG++GL
Sbjct: 129 DDLGKGGHKLSKSTGNAGSRVGCGIIGL 156

[Close]

BLAST of CsaV3_6G014400 vs. TAIR 10
Match: AT5G18100.2 (copper/zinc superoxide dismutase 3 )

HSP 1 Score: 157.9 bits (398), Expect = 9.4e-39
Identity = 75/126 (59.52%), Postives = 91/126 (72.22%), Query Frame = 0


Query: 73  KAVAVLKGTSAVEGVVTLTQEDDGPTSVNVRITGLTPGLHGFHLHEFGDTTNGCISTGAH 132
           +AVA++ G + V G +   Q+  G T V  +I+GL+PG HGFH+H FGDTTNGCISTG H
Sbjct: 9   RAVALIAGDNNVRGCLQFVQDISGTTHVTGKISGLSPGFHGFHIHSFGDTTNGCISTGPH 68

Query: 133 FNPNKLTHGAPEDEIRHAGDLGNITANADGVAEAIIVDNQIPLSGPYSVVGRAFVVHELE 192
           FNP    HG P +E RHAGDLGNI A ++GVAE +I D  IPLSG YS++GRA VVH   
Sbjct: 69  FNPLNRVHGPPNEEERHAGDLGNILAGSNGVAEILIKDKHIPLSGQYSILGRAVVVHADP 128

Query: 193 DDLGKG 199
           DDLGKG
Sbjct: 129 DDLGKG 134

The following BLAST results are available for this feature:

BLAST of CsaV3_6G014400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145768.1	3.7e-114	100.00	superoxide dismutase [Cu-Zn], chloroplastic [Cucumis sativus] >KGN46887.1 hypoth...	[more]
XP_008465422.1	9.9e-107	95.07	PREDICTED: superoxide dismutase [Cu-Zn], chloroplastic [Cucumis melo]	[more]
KAA0037303.1	2.5e-102	94.44	superoxide dismutase [Cucumis melo var. makuwa]	[more]
XP_038902141.1	1.3e-101	91.03	superoxide dismutase [Cu-Zn], chloroplastic [Benincasa hispida]	[more]
APO14279.1	3.6e-101	89.24	superoxide dismutase 3 [Luffa aegyptiaca]	[more]

BLAST of CsaV3_6G014400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65199	2.7e-83	75.93	Superoxide dismutase [Cu-Zn], chloroplastic OS=Vitis vinifera OX=29760 GN=SODCP ...	[more]
P10792	6.1e-83	73.52	Superoxide dismutase [Cu-Zn], chloroplastic OS=Petunia hybrida OX=4102 GN=SODCP ...	[more]
O04997	6.7e-82	76.92	Superoxide dismutase [Cu-Zn], chloroplastic OS=Solidago canadensis var. scabra O...	[more]
P14831	6.7e-82	74.89	Superoxide dismutase [Cu-Zn], chloroplastic OS=Solanum lycopersicum OX=4081 GN=S...	[more]
P07505	2.5e-81	74.77	Superoxide dismutase [Cu-Zn], chloroplastic OS=Spinacia oleracea OX=3562 GN=SODC...	[more]

BLAST of CsaV3_6G014400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEQ1	1.8e-114	100.00	Superoxide dismutase [Cu-Zn] OS=Cucumis sativus OX=3659 GN=Csa_6G148290 PE=3 SV=...	[more]
A0A1S3CNS3	4.8e-107	95.07	Superoxide dismutase [Cu-Zn] OS=Cucumis melo OX=3656 GN=LOC103503040 PE=3 SV=1	[more]
A0A5A7T2V6	1.2e-102	94.44	Superoxide dismutase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3G0...	[more]
A0A1L5JHV7	1.8e-101	89.24	Superoxide dismutase [Cu-Zn] OS=Luffa aegyptiaca OX=3670 PE=2 SV=1	[more]
A0A6J1K3P0	3.4e-97	87.44	Superoxide dismutase [Cu-Zn] OS=Cucurbita maxima OX=3661 GN=LOC111491386 PE=3 SV...	[more]

BLAST of CsaV3_6G014400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28190.1	3.8e-80	72.60	copper/zinc superoxide dismutase 2	[more]
AT1G08830.1	1.1e-52	66.22	copper/zinc superoxide dismutase 1	[more]
AT1G08830.2	1.1e-52	66.22	copper/zinc superoxide dismutase 1	[more]
AT5G18100.1	1.3e-48	60.14	copper/zinc superoxide dismutase 3	[more]
AT5G18100.2	9.4e-39	59.52	copper/zinc superoxide dismutase 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001424	Superoxide dismutase, copper/zinc binding domain	PRINTS	PR00068	CUZNDISMTASE	coord: 149..158 score: 78.25 coord: 113..135 score: 75.53 coord: 168..190 score: 58.9 coord: 193..219 score: 76.86
IPR001424	Superoxide dismutase, copper/zinc binding domain	PFAM	PF00080	Sod_Cu	coord: 81..218 e-value: 4.6E-45 score: 153.2
IPR001424	Superoxide dismutase, copper/zinc binding domain	CDD	cd00305	Cu-Zn_Superoxide_Dismutase	coord: 72..215 e-value: 2.44895E-63 score: 191.705
IPR036423	Superoxide dismutase-like, copper/zinc binding domain superfamily	GENE3D	2.60.40.200	Superoxide dismutase, copper/zinc binding domain	coord: 68..222 e-value: 2.1E-64 score: 218.3
IPR036423	Superoxide dismutase-like, copper/zinc binding domain superfamily	SUPERFAMILY	49329	Cu,Zn superoxide dismutase-like	coord: 73..220
None	No IPR available	PANTHER	PTHR10003:SF79	SUPEROXIDE DISMUTASE [CU-ZN] 1	coord: 70..221
IPR024134	Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone	PANTHER	PTHR10003	SUPEROXIDE DISMUTASE CU-ZN -RELATED	coord: 70..221
IPR018152	Superoxide dismutase, copper/zinc, binding site	PROSITE	PS00332	SOD_CU_ZN_2	coord: 207..218
IPR018152	Superoxide dismutase, copper/zinc, binding site	PROSITE	PS00087	SOD_CU_ZN_1	coord: 113..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G014400.1	CsaV3_6G014400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006801	superoxide metabolic process
molecular_function	GO:0046872	metal ion binding