CsaV3_6G013920 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G013920
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Protein of unknown function, DUF584
Location	chr6: 10093981 .. 10094739 (+)
RNA-Seq Expression	CsaV3_6G013920
Synteny	CsaV3_6G013920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAACCCTTTTCCTCTCTCTCTCTCTCTCTCTAACCCATCCCCCAAAAAGCTTTTATAAAAAGCACTTAACAAAATCAACTCCAAAAACCCTCAACCACTTTCTTCTCAAATCCTTTCCATAATCCCCAACTACTACTTTGATTTACATTAATCATCTTCTCTCCTTCTTATGGCGACCGGAAAAAGCTGTTACGGTCGTCGTTCCAGTTACCGTTTCCTCCCCGGCGACATCTCCGGCCACCACTCCTTCACTTCCGATTTCTCATTTGAACTAAACGAATCTGACATTTACAACTCAGGTAGTACGGCGAGATCTCCTACGCGAATCGCGAAGAAGAAAGTTTCATCGAAACGATCGGTGGAGGTGGGGGGAGGTGGAGGTGGAGGTGGAGCGTCTTCGTTGCCGGTGAATATTCCGGATTGGTCGAAGATTTTGAAGGAGGAATATAGAGAGAAGAGGAGTTTGGAATACGCGGACGATATGGAAGAGGATGAAGAGGAAGAAGAAGAAATGAGAGTTCCACCTCACGAGTTCTTGGCAAGGCAAATGGCGAGGACGAGGATCGCATCGTTTTCGGTGCACGAAGGAATTGGGAGGACGTTGAAGGGGAGAGATCTGAGTAGGGTAAGAAATGCAATTTGGGAAAAAACTGGGTTCGAGGACTGAAAGAAAATAATTATATATATATATATATTGGATGAGATTAATTAATTTAACGCAAGTAGTTTTCTTTTTTTCTATTTTAGGACGT

mRNA sequence

ATGGCGACCGGAAAAAGCTGTTACGGTCGTCGTTCCAGTTACCGTTTCCTCCCCGGCGACATCTCCGGCCACCACTCCTTCACTTCCGATTTCTCATTTGAACTAAACGAATCTGACATTTACAACTCAGGTAGTACGGCGAGATCTCCTACGCGAATCGCGAAGAAGAAAGTTTCATCGAAACGATCGGTGGAGGTGGGGGGAGGTGGAGGTGGAGGTGGAGCGTCTTCGTTGCCGGTGAATATTCCGGATTGGTCGAAGATTTTGAAGGAGGAATATAGAGAGAAGAGGAGTTTGGAATACGCGGACGATATGGAAGAGGATGAAGAGGAAGAAGAAGAAATGAGAGTTCCACCTCACGAGTTCTTGGCAAGGCAAATGGCGAGGACGAGGATCGCATCGTTTTCGGTGCACGAAGGAATTGGGAGGACGTTGAAGGGGAGAGATCTGAGTAGGGTAAGAAATGCAATTTGGGAAAAAACTGGGTTCGAGGACTGA

Coding sequence (CDS)

ATGGCGACCGGAAAAAGCTGTTACGGTCGTCGTTCCAGTTACCGTTTCCTCCCCGGCGACATCTCCGGCCACCACTCCTTCACTTCCGATTTCTCATTTGAACTAAACGAATCTGACATTTACAACTCAGGTAGTACGGCGAGATCTCCTACGCGAATCGCGAAGAAGAAAGTTTCATCGAAACGATCGGTGGAGGTGGGGGGAGGTGGAGGTGGAGGTGGAGCGTCTTCGTTGCCGGTGAATATTCCGGATTGGTCGAAGATTTTGAAGGAGGAATATAGAGAGAAGAGGAGTTTGGAATACGCGGACGATATGGAAGAGGATGAAGAGGAAGAAGAAGAAATGAGAGTTCCACCTCACGAGTTCTTGGCAAGGCAAATGGCGAGGACGAGGATCGCATCGTTTTCGGTGCACGAAGGAATTGGGAGGACGTTGAAGGGGAGAGATCTGAGTAGGGTAAGAAATGCAATTTGGGAAAAAACTGGGTTCGAGGACTGA

Protein sequence

MATGKSCYGRRSSYRFLPGDISGHHSFTSDFSFELNESDIYNSGSTARSPTRIAKKKVSSKRSVEVGGGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEEEEEEMRVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED*

Homology

[Close]

BLAST of CsaV3_6G013920 vs. NCBI nr
Match: XP_004145741.1 (uncharacterized protein LOC101215539 [Cucumis sativus] >KGN46838.1 hypothetical protein Csa_021100 [Cucumis sativus])

HSP 1 Score: 325.1 bits (832), Expect = 3.5e-85
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MATGKSCYGRRSSYRFLPGDISGHHSFTSDFSFELNESDIYNSGSTARSPTRIAKKKVSS 60
           MATGKSCYGRRSSYRFLPGDISGHHSFTSDFSFELNESDIYNSGSTARSPTRIAKKKVSS
Sbjct: 1   MATGKSCYGRRSSYRFLPGDISGHHSFTSDFSFELNESDIYNSGSTARSPTRIAKKKVSS 60

Query: 61  KRSVEVGGGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEEEEEEMRVPPH 120
           KRSVEVGGGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEEEEEEMRVPPH
Sbjct: 61  KRSVEVGGGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEEEEEEMRVPPH 120

Query: 121 EFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 166
           EFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED
Sbjct: 121 EFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 165

[Close]

BLAST of CsaV3_6G013920 vs. NCBI nr
Match: XP_008463944.1 (PREDICTED: uncharacterized protein LOC103501949 [Cucumis melo] >KAA0035343.1 uncharacterized protein E6C27_scaffold228G001470 [Cucumis melo var. makuwa] >TYK14294.1 uncharacterized protein E5676_scaffold84G00170 [Cucumis melo var. makuwa])

HSP 1 Score: 276.2 bits (705), Expect = 1.9e-70
Identity = 151/168 (89.88%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 1   MATGKSCYGRRSSYRFLPGDISG---HHSFTSDFSFELNESDIYNSGSTARSPTRIAKKK 60
           MATGKSCYG RS+YRFL GDISG   HHSFTSDFSFELNESDIYNSG TARSPTRI KKK
Sbjct: 1   MATGKSCYG-RSNYRFLTGDISGHHHHHSFTSDFSFELNESDIYNSG-TARSPTRIPKKK 60

Query: 61  VSSKRSVEVGGGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEEEEEEMRV 120
           +SSKR VEV    GGGGASSLPVNIPDWSKILKEEYREKRS EYADDME+DE+EEEEMRV
Sbjct: 61  ISSKR-VEV---QGGGGASSLPVNIPDWSKILKEEYREKRSSEYADDMEDDEDEEEEMRV 120

Query: 121 PPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 166
           PPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED
Sbjct: 121 PPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 162

[Close]

BLAST of CsaV3_6G013920 vs. NCBI nr
Match: XP_038901889.1 (uncharacterized protein LOC120088567 [Benincasa hispida])

HSP 1 Score: 246.5 bits (628), Expect = 1.6e-61
Identity = 142/173 (82.08%), Postives = 150/173 (86.71%), Query Frame = 0


Query: 1   MATGKSCYGRRSSYRFLPGDISG---HHSFTSDFSFELNESDIYNSGS--TARSP---TR 60
           MATGKSCYG RS+YRFL GDI+G   HHSFTSD SFELNESDIYNSGS  + RSP   TR
Sbjct: 1   MATGKSCYG-RSNYRFLTGDIAGHHHHHSFTSDLSFELNESDIYNSGSSKSPRSPATATR 60

Query: 61  IAKKKVSSKRSVEVGGGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEEEE 120
           I+KK  SSKR VE     GGGGASS PVNIPDWSKILKEEYREKR +EY DD+EEDE+E+
Sbjct: 61  ISKKP-SSKR-VE----AGGGGASSFPVNIPDWSKILKEEYREKR-MEYEDDLEEDEDED 120

Query: 121 EEMRVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 166
           EEMRVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED
Sbjct: 121 EEMRVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 165

[Close]

BLAST of CsaV3_6G013920 vs. NCBI nr
Match: KAG6605549.1 (hypothetical protein SDJN03_02866, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013893.1 hypothetical protein SDJN02_24062, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 235.0 bits (598), Expect = 4.8e-58
Identity = 135/174 (77.59%), Postives = 142/174 (81.61%), Query Frame = 0


Query: 1   MATGKSCYGRRSSYRFLPGDISG-HHSFTSDFSFELNESDIYNSGS-----TARSPTRIA 60
           MATGKSCYG RS+YRFL GDISG HHSFTSD  FELNESDIYNSGS       RSP  I 
Sbjct: 1   MATGKSCYG-RSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSP--IP 60

Query: 61  KKKVSSKRS---VEVGGGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEEE 120
            K++S K S   VE+      GGASSLPVNIPDWSKILKEEYREKRS+EY +DMEEDEE+
Sbjct: 61  AKRISKKPSSNPVEL-----RGGASSLPVNIPDWSKILKEEYREKRSVEYDEDMEEDEED 120

Query: 121 EEEMRVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 166
            EEMRVPPHEFLARQ ARTR ASFSVHEGIGRTLKGRDLSRVRNAIWEK GFED
Sbjct: 121 WEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDLSRVRNAIWEKIGFED 166

[Close]

BLAST of CsaV3_6G013920 vs. NCBI nr
Match: XP_022996303.1 (uncharacterized protein LOC111491571 [Cucurbita maxima])

HSP 1 Score: 234.6 bits (597), Expect = 6.3e-58
Identity = 134/174 (77.01%), Postives = 143/174 (82.18%), Query Frame = 0


Query: 1   MATGKSCYGRRSSYRFLPGDISG-HHSFTSDFSFELNESDIYNSGS-----TARSPTRIA 60
           MA+GKSCYG RS+YRFL GDISG HHSFTSD  FELNESDIYNSGS       RSP  I 
Sbjct: 1   MASGKSCYG-RSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSP--IP 60

Query: 61  KKKVSSKRS---VEVGGGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEEE 120
            K++S K S   VE+      GGASSLPVNIPDWSKILKEEYREKRS+EY +DMEEDE++
Sbjct: 61  AKRISKKPSSNPVEL-----RGGASSLPVNIPDWSKILKEEYREKRSVEYDEDMEEDEDD 120

Query: 121 EEEMRVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 166
            EEMRVPPHEFLARQMARTR ASFSVHEGIGRTLKGRDLSRVRNAIWEK GFED
Sbjct: 121 WEEMRVPPHEFLARQMARTRTASFSVHEGIGRTLKGRDLSRVRNAIWEKIGFED 166

[Close]

BLAST of CsaV3_6G013920 vs. ExPASy TrEMBL
Match: A0A0A0KBD5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G141350 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.7e-85
Identity = 165/165 (100.00%), Postives = 165/165 (100.00%), Query Frame = 0


Query: 1   MATGKSCYGRRSSYRFLPGDISGHHSFTSDFSFELNESDIYNSGSTARSPTRIAKKKVSS 60
           MATGKSCYGRRSSYRFLPGDISGHHSFTSDFSFELNESDIYNSGSTARSPTRIAKKKVSS
Sbjct: 1   MATGKSCYGRRSSYRFLPGDISGHHSFTSDFSFELNESDIYNSGSTARSPTRIAKKKVSS 60

Query: 61  KRSVEVGGGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEEEEEEMRVPPH 120
           KRSVEVGGGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEEEEEEMRVPPH
Sbjct: 61  KRSVEVGGGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEEEEEEMRVPPH 120

Query: 121 EFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 166
           EFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED
Sbjct: 121 EFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 165

[Close]

BLAST of CsaV3_6G013920 vs. ExPASy TrEMBL
Match: A0A5A7SXR0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00170 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.1e-71
Identity = 151/168 (89.88%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 1   MATGKSCYGRRSSYRFLPGDISG---HHSFTSDFSFELNESDIYNSGSTARSPTRIAKKK 60
           MATGKSCYG RS+YRFL GDISG   HHSFTSDFSFELNESDIYNSG TARSPTRI KKK
Sbjct: 1   MATGKSCYG-RSNYRFLTGDISGHHHHHSFTSDFSFELNESDIYNSG-TARSPTRIPKKK 60

Query: 61  VSSKRSVEVGGGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEEEEEEMRV 120
           +SSKR VEV    GGGGASSLPVNIPDWSKILKEEYREKRS EYADDME+DE+EEEEMRV
Sbjct: 61  ISSKR-VEV---QGGGGASSLPVNIPDWSKILKEEYREKRSSEYADDMEDDEDEEEEMRV 120

Query: 121 PPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 166
           PPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED
Sbjct: 121 PPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 162

[Close]

BLAST of CsaV3_6G013920 vs. ExPASy TrEMBL
Match: A0A1S3CKD1 (uncharacterized protein LOC103501949 OS=Cucumis melo OX=3656 GN=LOC103501949 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.1e-71
Identity = 151/168 (89.88%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 1   MATGKSCYGRRSSYRFLPGDISG---HHSFTSDFSFELNESDIYNSGSTARSPTRIAKKK 60
           MATGKSCYG RS+YRFL GDISG   HHSFTSDFSFELNESDIYNSG TARSPTRI KKK
Sbjct: 1   MATGKSCYG-RSNYRFLTGDISGHHHHHSFTSDFSFELNESDIYNSG-TARSPTRIPKKK 60

Query: 61  VSSKRSVEVGGGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEEEEEEMRV 120
           +SSKR VEV    GGGGASSLPVNIPDWSKILKEEYREKRS EYADDME+DE+EEEEMRV
Sbjct: 61  ISSKR-VEV---QGGGGASSLPVNIPDWSKILKEEYREKRSSEYADDMEDDEDEEEEMRV 120

Query: 121 PPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 166
           PPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED
Sbjct: 121 PPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 162

[Close]

BLAST of CsaV3_6G013920 vs. ExPASy TrEMBL
Match: A0A6J1KAF0 (uncharacterized protein LOC111491571 OS=Cucurbita maxima OX=3661 GN=LOC111491571 PE=4 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 3.0e-58
Identity = 134/174 (77.01%), Postives = 143/174 (82.18%), Query Frame = 0


Query: 1   MATGKSCYGRRSSYRFLPGDISG-HHSFTSDFSFELNESDIYNSGS-----TARSPTRIA 60
           MA+GKSCYG RS+YRFL GDISG HHSFTSD  FELNESDIYNSGS       RSP  I 
Sbjct: 1   MASGKSCYG-RSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSP--IP 60

Query: 61  KKKVSSKRS---VEVGGGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEEE 120
            K++S K S   VE+      GGASSLPVNIPDWSKILKEEYREKRS+EY +DMEEDE++
Sbjct: 61  AKRISKKPSSNPVEL-----RGGASSLPVNIPDWSKILKEEYREKRSVEYDEDMEEDEDD 120

Query: 121 EEEMRVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 166
            EEMRVPPHEFLARQMARTR ASFSVHEGIGRTLKGRDLSRVRNAIWEK GFED
Sbjct: 121 WEEMRVPPHEFLARQMARTRTASFSVHEGIGRTLKGRDLSRVRNAIWEKIGFED 166

[Close]

BLAST of CsaV3_6G013920 vs. ExPASy TrEMBL
Match: A0A6J1H2V6 (uncharacterized protein LOC111459858 OS=Cucurbita moschata OX=3662 GN=LOC111459858 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.7e-54
Identity = 130/174 (74.71%), Postives = 137/174 (78.74%), Query Frame = 0


Query: 1   MATGKSCYGRRSSYRFLPGDISG-HHSFTSDFSFELNESDIYNSGS-----TARSPTRIA 60
           MATGKSCYG RS+YRFL GDISG HHSFTSD  FELNESDIYNSGS       RSP  I 
Sbjct: 1   MATGKSCYG-RSNYRFLSGDISGHHHSFTSDLPFELNESDIYNSGSLISPEIRRSP--IP 60

Query: 61  KKKVSSKRS---VEVGGGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEEE 120
            K++S K S   VE+      GGASSLPVNIPDWSKILKEEYREKRS+EY      DEE+
Sbjct: 61  AKRISKKPSSNPVEL-----RGGASSLPVNIPDWSKILKEEYREKRSVEY------DEED 120

Query: 121 EEEMRVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 166
            EEMRVPPHEFLARQ ARTR ASFSVHEGIGRTLKGRD+SRVRNAIWEK GFED
Sbjct: 121 WEEMRVPPHEFLARQTARTRTASFSVHEGIGRTLKGRDMSRVRNAIWEKIGFED 160

[Close]

BLAST of CsaV3_6G013920 vs. TAIR 10
Match: AT5G60680.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 134.0 bits (336), Expect = 1.1e-31
Identity = 89/173 (51.45%), Postives = 112/173 (64.74%), Query Frame = 0


Query: 1   MATGKSCYGRRSSYRFLPGDISGHHSFTSDFSFELNESDIYNSGSTARSPTRIAKKKVSS 60
           MATGKS Y  R SYRFL  D   + +  SD   E +ESD++N      S +    +K+SS
Sbjct: 1   MATGKSYYA-RPSYRFLGTDQPSYFT-ASDSGLEFDESDLFN---PIHSDSPDFCRKISS 60

Query: 61  ------KRSVEVGGGGGGGGASSLPVNIPDWSKILKEEYRE--KRSLEYADDMEEDEEEE 120
                 K S           ASSLPVN+PDWSKIL+ EYR+  +RS+E  DD ++D E+ 
Sbjct: 61  SVRSGKKSSNRPSAASSAAAASSLPVNVPDWSKILRGEYRDNRRRSIEDNDDDDDDNEDG 120

Query: 121 EEMRVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 166
            +  +PPHEFL    A+TR+ASFSVHEG+GRTLKGRDLSRVRNAI+EK GF+D
Sbjct: 121 GDW-LPPHEFL----AKTRMASFSVHEGVGRTLKGRDLSRVRNAIFEKFGFQD 163

[Close]

BLAST of CsaV3_6G013920 vs. TAIR 10
Match: AT2G28400.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 123.2 bits (308), Expect = 1.9e-28
Identity = 84/171 (49.12%), Postives = 107/171 (62.57%), Query Frame = 0


Query: 1   MATGKSCYGRRSSYRFLPGDISGHHSFTSDFSFELNESDIYNSGSTARSPTRIAKKKVSS 60
           MAT K CY  R S+RF   D   H + TSD  FEL+E D++N+GS + S    +   ++S
Sbjct: 1   MATSK-CYYPRPSHRFFTTD--QHVTATSD--FELDEWDLFNTGSDSSSSFSFSDLTITS 60

Query: 61  KRSVE----VGGGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEE--EEEE 120
            R+       GG   G  ASSLPVN+PDWSKIL +E R +R +   ++++ DE    E  
Sbjct: 61  GRTGTNRQIHGGSDSGKAASSLPVNVPDWSKILGDESRRQRKISNEEEVDGDEILCGEGT 120

Query: 121 MRVPPHEFLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 166
            RVPPHE LA +    R+ASFSVHEG GRTLKGRDLSRVRN I++  G ED
Sbjct: 121 RRVPPHELLANR----RMASFSVHEGAGRTLKGRDLSRVRNTIFKIRGIED 162

[Close]

BLAST of CsaV3_6G013920 vs. TAIR 10
Match: AT3G45210.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 118.2 bits (295), Expect = 6.1e-27
Identity = 80/164 (48.78%), Postives = 105/164 (64.02%), Query Frame = 0


Query: 2   ATGKSCYGRRSSYRFLPGDISGHHSFTSDFSFELNESDIYNSGSTARSPTRIAKKKVSSK 61
           AT KS Y +R S+RFLP D +  ++ T D  FE +ESD+Y++ S +       +K ++S 
Sbjct: 4   ATRKSYY-QRPSHRFLPTDRT--YNVTGDSEFEFDESDLYSNRSDS---PEFRRKLITSN 63

Query: 62  RSVEVGGGGGGGGASSLPVNIPDWSKILKEEYREKRSLEYADDMEEDEEEEEEMRVPPHE 121
           R            ASSLP+N+ +WSKIL +E R  +S+E  DD  E        ++PPHE
Sbjct: 64  RKSSPATVTTTTVASSLPMNVQNWSKILGKENR--KSIENDDDGGEG-------KLPPHE 123

Query: 122 FLARQMARTRIASFSVHEGIGRTLKGRDLSRVRNAIWEKTGFED 166
           +L    A+TR+ASFSVHEGIGRTLKGRD+SRVRNAI EKTGF D
Sbjct: 124 YL----AKTRMASFSVHEGIGRTLKGRDMSRVRNAILEKTGFLD 148

[Close]

BLAST of CsaV3_6G013920 vs. TAIR 10
Match: AT5G03230.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 107.1 bits (266), Expect = 1.4e-23
Identity = 68/145 (46.90%), Postives = 88/145 (60.69%), Query Frame = 0


Query: 33  FELNESDIYNSGSTARSPTRIAKKKVSSKRSVEVGGGGGGGG------ASSLPVNIPDWS 92
           FE +ESDI+N G      +  AK+ +S  R        G  G        SLPVNIPDWS
Sbjct: 28  FEFDESDIHNLGDHQLPNSFDAKRSISISRLRRKPTKTGDSGNREITKTGSLPVNIPDWS 87

Query: 93  KILKEEYREKRSLEYADDMEEDEEEEEEMR------VPPHEFLARQMARTRIASFSVHEG 152
           KILK EYR     +  DD ++D+E++++        +PPHE+LAR+    R +SF+VHEG
Sbjct: 88  KILKSEYRGHAIPD--DDSDDDDEDDDDSNDGGRRMIPPHEYLARR----RGSSFTVHEG 147

Query: 153 IGRTLKGRDLSRVRNAIWEKTGFED 166
           IG T KGRDL R+RNAIWEK GF+D
Sbjct: 148 IGGTAKGRDLRRLRNAIWEKIGFQD 166

[Close]

BLAST of CsaV3_6G013920 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 )

HSP 1 Score: 102.1 bits (253), Expect = 4.5e-22
Identity = 60/137 (43.80%), Postives = 90/137 (65.69%), Query Frame = 0


Query: 28  TSDFSFELNESDIYNSGSTARSPTRIAKKKVSSKRSVEVGGGGGGGGASSLPVNIPDWSK 87
           TS    ++ +S   +S S++ SP  I       +RS EV     G   SS P+N+PDWSK
Sbjct: 41  TSSPEMKIPKSHFSSSSSSSSSPWNI-------RRSKEV----SGVKQSSAPMNVPDWSK 100

Query: 88  ILKEEYREKRSLE-YADDMEEDEEEEEEMRVPPHEFLARQMARTRIASFSVHEGIGRTLK 147
           +  +    +RS   ++   ++D+E+++   VPPHE++AR++ART+I+SFS+ EG+GRTLK
Sbjct: 101 VYGDSKSNRRSSHLHSHAADDDDEDDDGCMVPPHEWVARKLARTQISSFSMCEGVGRTLK 160

Query: 148 GRDLSRVRNAIWEKTGF 164
           GRDLS+VRNA+  KTGF
Sbjct: 161 GRDLSKVRNAVLSKTGF 166

The following BLAST results are available for this feature:

BLAST of CsaV3_6G013920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145741.1	3.5e-85	100.00	uncharacterized protein LOC101215539 [Cucumis sativus] >KGN46838.1 hypothetical ...	[more]
XP_008463944.1	1.9e-70	89.88	PREDICTED: uncharacterized protein LOC103501949 [Cucumis melo] >KAA0035343.1 unc...	[more]
XP_038901889.1	1.6e-61	82.08	uncharacterized protein LOC120088567 [Benincasa hispida]	[more]
KAG6605549.1	4.8e-58	77.59	hypothetical protein SDJN03_02866, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022996303.1	6.3e-58	77.01	uncharacterized protein LOC111491571 [Cucurbita maxima]	[more]

BLAST of CsaV3_6G013920 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G013920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBD5	1.7e-85	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G141350 PE=4 SV=1	[more]
A0A5A7SXR0	9.1e-71	89.88	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CKD1	9.1e-71	89.88	uncharacterized protein LOC103501949 OS=Cucumis melo OX=3656 GN=LOC103501949 PE=...	[more]
A0A6J1KAF0	3.0e-58	77.01	uncharacterized protein LOC111491571 OS=Cucurbita maxima OX=3661 GN=LOC111491571...	[more]
A0A6J1H2V6	2.7e-54	74.71	uncharacterized protein LOC111459858 OS=Cucurbita moschata OX=3662 GN=LOC1114598...	[more]

BLAST of CsaV3_6G013920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60680.1	1.1e-31	51.45	Protein of unknown function, DUF584	[more]
AT2G28400.1	1.9e-28	49.12	Protein of unknown function, DUF584	[more]
AT3G45210.1	6.1e-27	48.78	Protein of unknown function, DUF584	[more]
AT5G03230.1	1.4e-23	46.90	Protein of unknown function, DUF584	[more]
AT4G04630.1	4.5e-22	43.80	Protein of unknown function, DUF584	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007608	Senescence regulator S40	PFAM	PF04520	Senescence_reg	coord: 45..165 e-value: 2.6E-41 score: 142.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..119
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..78
None	No IPR available	PANTHER	PTHR46525:SF2	EMB\|CAB72159.1	coord: 1..165
None	No IPR available	PANTHER	PTHR46525	EMB\|CAB72159.1	coord: 1..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G013920.1	CsaV3_6G013920.1	mRNA