CsaV3_6G012800 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G012800
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 8921570 .. 8921851 (+)
RNA-Seq ExpressionCsaV3_6G012800
SyntenyCsaV3_6G012800
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGCTCCATTTCTCTACACTACGCCTATGTCCACTGGCCCTTTATTTCACATAATGTCGATTTCTTTTCTAATGTCAAATTCCATCATCACCAATGAATTGTGGAGCCCTTGCAATATGCTAATTTCACACGGACAGAGCTTTGTGATCAACAAAGTCGGTCAATCATGGATGATCCTCCAGTGTGCCACTGGAAAGCTCCAGCGTATTTTAAATTGTCTAGAAGTGTTGCAAAACCATGATGCTATTTGCCGTTCAGTTCTATATATCACCTCATAG

mRNA sequence

ATGCATGCTCCATTTCTCTACACTACGCCTATGTCCACTGGCCCTTTATTTCACATAATGTCGATTTCTTTTCTAATGTCAAATTCCATCATCACCAATGAATTGTGGAGCCCTTGCAATATGCTAATTTCACACGGACAGAGCTTTGTGATCAACAAAGTCGGTCAATCATGGATGATCCTCCAGTGTGCCACTGGAAAGCTCCAGCGTATTTTAAATTGTCTAGAAGTGTTGCAAAACCATGATGCTATTTGCCGTTCAGTTCTATATATCACCTCATAG

Coding sequence (CDS)

ATGCATGCTCCATTTCTCTACACTACGCCTATGTCCACTGGCCCTTTATTTCACATAATGTCGATTTCTTTTCTAATGTCAAATTCCATCATCACCAATGAATTGTGGAGCCCTTGCAATATGCTAATTTCACACGGACAGAGCTTTGTGATCAACAAAGTCGGTCAATCATGGATGATCCTCCAGTGTGCCACTGGAAAGCTCCAGCGTATTTTAAATTGTCTAGAAGTGTTGCAAAACCATGATGCTATTTGCCGTTCAGTTCTATATATCACCTCATAG

Protein sequence

MHAPFLYTTPMSTGPLFHIMSISFLMSNSIITNELWSPCNMLISHGQSFVINKVGQSWMILQCATGKLQRILNCLEVLQNHDAICRSVLYITS*
Homology
[Close]
BLAST of CsaV3_6G012800 vs. NCBI nr
Match: KGN46725.1 (hypothetical protein Csa_020748 [Cucumis sativus])

HSP 1 Score: 193.0 bits (489), Expect = 1.2e-45
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MHAPFLYTTPMSTGPLFHIMSISFLMSNSIITNELWSPCNMLISHGQSFVINKVGQSWMI 60
          MHAPFLYTTPMSTGPLFHIMSISFLMSNSIITNELWSPCNMLISHGQSFVINKVGQSWMI
Sbjct: 1  MHAPFLYTTPMSTGPLFHIMSISFLMSNSIITNELWSPCNMLISHGQSFVINKVGQSWMI 60

Query: 61 LQCATGKLQRILNCLEVLQNHDAICRSVLYITS 94
          LQCATGKLQRILNCLEVLQNHDAICRSVLYITS
Sbjct: 61 LQCATGKLQRILNCLEVLQNHDAICRSVLYITS 93

[Close]
BLAST of CsaV3_6G012800 vs. ExPASy TrEMBL
Match: A0A0A0KAH0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G127370 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 5.8e-46
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MHAPFLYTTPMSTGPLFHIMSISFLMSNSIITNELWSPCNMLISHGQSFVINKVGQSWMI 60
          MHAPFLYTTPMSTGPLFHIMSISFLMSNSIITNELWSPCNMLISHGQSFVINKVGQSWMI
Sbjct: 1  MHAPFLYTTPMSTGPLFHIMSISFLMSNSIITNELWSPCNMLISHGQSFVINKVGQSWMI 60

Query: 61 LQCATGKLQRILNCLEVLQNHDAICRSVLYITS 94
          LQCATGKLQRILNCLEVLQNHDAICRSVLYITS
Sbjct: 61 LQCATGKLQRILNCLEVLQNHDAICRSVLYITS 93

The following BLAST results are available for this feature:
BLAST of CsaV3_6G012800 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46725.11.2e-45100.00hypothetical protein Csa_020748 [Cucumis sativus][more]
BLAST of CsaV3_6G012800 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G012800 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAH05.8e-46100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G127370 PE=4 SV=1[more]
BLAST of CsaV3_6G012800 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G012800.1CsaV3_6G012800.1mRNA