CsaV3_6G012730 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GGTTATTCTACATAAAGAAGTTTATACATGGATCAAACTGAGAAATAATTGGTTTTTCTTTATAACATTGTTGTTTATAGGAACCAATATTTCACTAAGATGACCATAGGAGACTTGACCTTGATCCTAAGTAAGTTGTAAACTTCTACTTATGATGACGGTCCTTTGATTTGTATGGATGAGGTTGACTAATGATAGTCGACTCAACAAGTCTAACATTTTTGGGCTTTTACTAAGTAAGGAGCTTAAAACACAACGATGACAAGATGGAAGGTCATGCCTCGCCCCGTAACACCTCCTGACCCTCGAGTTGCAGGGTGGGATGCGACAGCTACATTTCTTGGGAATGGAACAAGTGCAAGTTTATAAGTTGCTCTTTTGGAAAACTTGAGCTAAAGATTTAACTTGTCTTTGTTAGATGTTTCGAAAAGACAACATGACAAGAAGAGGATGAGGACGATGTGGGAGTAGATCGCATACAACAGTTAAGCTCGATATGGCTCGATAAGAAGCTCAAGTAGTTAACCTAGATGCTAGAAGAGAAAGAGAAAAGAAATTATATATATGATAGAGTTGCCCAAAGGGTTGATTGAAAGATTGTCAAGAGAACCAGAGAAAAAGTTTGGAATAGAGCGGCTAAAAGCTTTAGCAGCCCAAGAATTCACAGAAAAGATTGAGCTAGAACAAGCGGAGAAATGGATAAGAACATTGGAAAAGAGTTTTAGAGTTGTGCAATGTGCAGAAGAGAGTAAAGTGGAATTCACAGTGCTCTTACAATGCAAGAAGGAGCAGAAGATAGGTGAGGAAGAGTGAGCAGAAAAAAGTTCAAGGAGATTTTCAATGGGAAGTATTTTTATAGGACTTACAAAGAAGAAAGGTGAGATGAATTTCTCCATTTGGGGCAAGGTGAGCTCTCGACCCCATAATATAAGAGGAAGTTCACCAAATTTGTGAAGTATGCATTGGTGATGGTGGCGATAGAAAGAAAAAGATGTAGATGTTTTGAGACTAGTTTAAGACCACAAATAAGAACTCTGGTTACAGCTTTAGCTATGCGGTGTGATTATGCAAAGTTGGTGGATGTAGCTCTACGAGCTGAGAGGAGTTTGGGAGGAAAAAGATCAAGTACTATGGTGAGTTGA ATGATAGAGTTGCCCAAAGGGTTGATTGAAAGATTGTCAAGAGAACCAGAGAAAAAGTTTGGAATAGAGCGGCTAAAAGCTTTAGCAGCCCAAGAATTCACAGAAAAGATTGAGCTAGAACAAGCGGAGAAATGGATAAGAACATTGGAAAAGAGTTTTAGAGTTGTGCAATGTGCAGAAGAGAGTAAAGTGGAATTCACAGTGCTCTTACAATGCAAGAAGGAGCAGAAGATAGCTTTAGCTATGCGGTGTGATTATGCAAAGTTGGTGGATGTAGCTCTACGAGCTGAGAGGAGTTTGGGAGGAAAAAGATCAAGTACTATGGTGAGTTGA ATGATAGAGTTGCCCAAAGGGTTGATTGAAAGATTGTCAAGAGAACCAGAGAAAAAGTTTGGAATAGAGCGGCTAAAAGCTTTAGCAGCCCAAGAATTCACAGAAAAGATTGAGCTAGAACAAGCGGAGAAATGGATAAGAACATTGGAAAAGAGTTTTAGAGTTGTGCAATGTGCAGAAGAGAGTAAAGTGGAATTCACAGTGCTCTTACAATGCAAGAAGGAGCAGAAGATAGCTTTAGCTATGCGGTGTGATTATGCAAAGTTGGTGGATGTAGCTCTACGAGCTGAGAGGAGTTTGGGAGGAAAAAGATCAAGTACTATGGTGAGTTGA MIELPKGLIERLSREPEKKFGIERLKALAAQEFTEKIELEQAEKWIRTLEKSFRVVQCAEESKVEFTVLLQCKKEQKIALAMRCDYAKLVDVALRAERSLGGKRSSTMVS* Homology
BLAST of CsaV3_6G012730 vs. NCBI nr
Match: KGN46719.1 (hypothetical protein Csa_020815 [Cucumis sativus]) HSP 1 Score: 207.6 bits (527), Expect = 5.5e-50 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of CsaV3_6G012730 vs. NCBI nr
Match: KGN61535.1 (hypothetical protein Csa_006696 [Cucumis sativus]) HSP 1 Score: 64.7 bits (156), Expect = 5.8e-07 Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 0
BLAST of CsaV3_6G012730 vs. NCBI nr
Match: KGN64939.1 (hypothetical protein Csa_022824 [Cucumis sativus]) HSP 1 Score: 64.3 bits (155), Expect = 7.5e-07 Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of CsaV3_6G012730 vs. NCBI nr
Match: KAA0066608.1 (A-kinase anchor protein 12 [Cucumis melo var. makuwa] >TYK14208.1 A-kinase anchor protein 12 [Cucumis melo var. makuwa]) HSP 1 Score: 61.6 bits (148), Expect = 4.9e-06 Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 0
BLAST of CsaV3_6G012730 vs. NCBI nr
Match: XP_038896416.1 (uncharacterized protein LOC120084680 [Benincasa hispida]) HSP 1 Score: 60.5 bits (145), Expect = 1.1e-05 Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = 0
BLAST of CsaV3_6G012730 vs. ExPASy TrEMBL
Match: A0A0A0KCZ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G127310 PE=4 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 2.7e-50 Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0
BLAST of CsaV3_6G012730 vs. ExPASy TrEMBL
Match: A0A0A0LI31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G163160 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.8e-07 Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = 0
BLAST of CsaV3_6G012730 vs. ExPASy TrEMBL
Match: A0A0A0LVF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G165220 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 3.6e-07 Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of CsaV3_6G012730 vs. ExPASy TrEMBL
Match: A0A5D3CSN0 (A-kinase anchor protein 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00330 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 2.4e-06 Identity = 36/69 (52.17%), Postives = 50/69 (72.46%), Query Frame = 0
BLAST of CsaV3_6G012730 vs. ExPASy TrEMBL
Match: A0A0A0L7X2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G426910 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 6.9e-06 Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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