CsaV3_6G010220 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G010220
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionNPC intracellular cholesterol transporter 1-like
Locationchr6: 8314127 .. 8320027 (+)
RNA-Seq ExpressionCsaV3_6G010220
SyntenyCsaV3_6G010220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTTCTTTGTATCTATGCTGATGAGAGGGGAGGCTGATTTATCTGTCCCTGTGCGTTCCGGTTCTACTTTCGGGTAAGGTCATCATAATCAGGCCACCGAATATATTACAAGTCAATTGGGTACCCACGTACAATGGGGATTTCTGTTTTATTTTGTAAATTTCCCTTTATGCTCTTTTTAGTTTTGAGATTTGAGATTCATGGTGCCATGTTTATCGTTGATACTAATTTCCAAATGACAGTTGGTATGGGTTGAATTTGACTTTATGTATTGACAATCGTTTCTATCAGGGAGAGACACGCAGCAGAGTACTGTGCTATGTATGATATATGTGGAACACGCAGTGATGGGAAGGTTCTGAATTGCCCTTATGGTTCGCCATCTGTGAAGGTCTTTATCTTTTAACTTATTCAGGATGTCTGTGCACAACTGTTCTTAAATGACCCCTGTTTACTATGCTTTGCAGCCTGATGAGCTGTTCTCAGCAAAAATTCAAAGTCTTTGTCCTACAATAAGTGGCAATGTTTGTTGTACTGAGGCTCAATTTGAGACATTACGGTCACAGGTTCAACAAGTGAGGCTCATCTCCCATTTTTGAAATTTGATGATACATAACTGCCTTTAATGATCATTCTTAATGAAATTGAGATACAGAACTGCATGGATGGATCATAAAAGGTTTGGTGGAATTGATTATTTTTTGCGTATTAATCTTTTGGCATGATCATCTACTGTTTCTTGATAGTTTATGAGCATGAGGCATATAGAATAATGTACTATCTTCAAGCTTTTCTTAATTAAGTGACTATCTGTCTCTTGGAATGAACTGTTTCTTGTCATGTTGTATGAGGTTATGTTGAAAATGCTAGCTGATTTATAGCTTGTAGATGCTTGCCACCTGATTTAGAATTATTGAAACCAATAGAACACAAAACACCGGCTTACGTGGAAACCTGAGTACCGGGTGAAAAACCACGAATCTTTTGTTATTATTTTCTGATGAGTTTACAATAGGTAGAATGAGAGAGAATCAATAGAAAACACAATGAGATAAAAAAGGAAAATATTTAGGGATTAGGGTAAATTTTTCCATAAACACCCTATGGGCCAAGTCCACAAATTCTAATACTCCTCCTCAAGTTGGGACGTAAATATCAATGAGGCTGTTAGGGCGGTGATCATTCGCACATATAAAAGAAAGGGCAGAAACGTCATTAACCAGCAAATAAATGACGAGGAAATGATTGGGGAAAAGATTGTGATAGGTAGGGCCCACGGGTAGGGGAGAGAGAGAGAGATATATAAATAGAACATTATGGGGAATGCTGTAAGTAGGGCTTATTTTTGTGTAAAAGCTACAAGAGCTAGGGGAGAGGTTTTCCGGCCATCCGTAAAGGTGCTGGGTATGTTATTACTGTTTTCTTTGTCTTGTACTTGGTGAGTCATCCTGTGGATCTTATTTTGGTTAAAGTAATATAAATAACAGAGTGCTGCCTCTGTTTTTAGCCCTTTGTTAGGATTGTTTATGCTATTTTAAGGTAGATTTCTGTTGGTGATATATAATTAAATTTGCCTTCAACCACTAGCTTAAGCTTTTGGATGAATTGGTGGTTTAATATGGTATCAGAGCAGGTGGTCCAGGGAGGTCCTGTGTTCAAGCCCCTGCATTGTCGTTTCCTCCCCCAATTAAAATCAATTTCCACTTGTTGGGCCTTTCAAATATTTCAAACCCAAAAGTGAGGTAAAATTGATTCCACTTGTTGGACCTTTCAGATATTTCAAGCCCACAAGTGAGGGGGAGTGTTGGTGATATATAATTAAATTTGCCTTCAACCACTAGCTTAAGCTTTTGGATGAATTGGTGGTTTAATAATTTCTAACAAATTGGTATCAGAACCAAAGAAAAACTGGGGGCTGGCTACACACTTAATGGCTCACAAATAAATGGAAGAGAGATTAGAGGGGATGAAAATGGAAGTATTGGGGCTAAAAGAGATGATGCTTGAACTTATTCAACTTTACGATGGGAGAAAAAGTCTCTGAATAATCAACACCATAGATTTGAGTAAATCCCTTTGCAACTAACCTTGCCTTGTATCTGTCAAGTGTTCCATCTACTTTGTATTTGAGAGTGAACACCCATTTGCATCCCACAAGTTTGTGTCCCTGGGGTAAAACACAAATCTCCCAAGTTTAATTCTTTTCAAGAGCATTCATTTCTCCCATGATAGCATTCTTCCATTTAGGACACTCTAAAGCAATGTGGGTATTTTTTGGTATTATGGTAGAATCAAGACTTGCCATAAAAGCTATGAACTGTGGAGAGAGATTATCATAGGAAACGTAGTTACAAATGGGATGTTTTGTACAAGACTTGGTACCCCTGTATGACCCTGTTCAACTTCATTATTATCGGTTTCTGCTCTGCCCTCAGTTTTATCACCACTGTTCTTTTCTTTCACATTTTCAAGAACAACATCAAACCTGTCATTTCTCACTCATTTTATTATCAGTACAAGGTTTAGTAGGGTTTTCCATACCTTAATCTCGAGGAGGTTCAGAGTCTGTGACTGGAGCCAATTGACTAGTAGGGGACCCAATTTTACTTATGAGATCTTTCCTATAGTACATTTTCCAGGGAACTTGGTTTGTGGGTAGGACTATGGAATGAGGATCGGAGTCAGATACGATACTAGGAGTAGGTTCGACAAACTCTAAGGTACAGTTAGGCTCTTCACTTACTCTCCCTTTGAAGATGGCTAATGAGAAAGATGGGTCGGTCCTCATAAAAATTAACATCTGCGCTGATGAAGTATTTCCTGGAAGATGGATGAAAATATTTAAAACCGTGCTGATGAAGGGGATAACCAACAAACACACATGCTTGAGCCTAGGGATAAATTTGGTTTGATTAGGGTTGAAATTGTGGACATATGCGGCACACCCAACACACGAAGGGGAACCACATAAATTAACTGAATAGAAGGGTAGGACTCCTTAAGACAAAATTTACCAAAGGAGGTAAGGGTGAAAGGTTCAATCTTCTGGAACCACCGTTCCCAAAGGAGGTAGTGACTTTGAGTGGACCCCAAATGTCACTATGAATAAGGGTGTAAGGTTGTGTGGGTCTATATGGTTGTGAGGGAAAGGAAACCAAATGTTGTTTTTAACTAATACACACATCACAAGATAGAGAGGAGACATCAATTTTAGAAAATAGATAGGGAAACAAATATTTCATAACATTAAAGTTTGGGTGAACCAACCGAAAAATTCATAACATACAATCATGTTAGGAAGTGCTAAAATAGGAAGAGAGTAAACTTGCCCTAAAGATAACTATTGGAGGTATCTTCATCAAGAATGTAAAGTCTCTCACTATGCTGGGCAGTGTCAATCATCCTTCCTGAGCTCATGTCCTGAAAAAACAAATAGCTTTAGGTAAGAAGATAACTTTACAGTGTAGTTCACGAGCGATTTTGTTATAGATAGCAAATTGTAAGAAAGTTTAGGCACATGCAGAATATTTTGGAAAGCAAGATCGTCAAAGGGAACCATTTGTCCTTTTGTAGCAATTGGGGTTATAGAGCCATCAACTATCCATATTTTTTCATTACTGGCACATGGGGCATAAGAGATAAAGTGCTCCGAAGAATCTGTCAAGTGATATGTAGCCTCTGAGTCTAAAACCCAAGGATTCTCCCCATTAACACTAATAAGCCCAATGGGACTGAGGCATACATGACTGAGCAATGACACCCAAAGTAGGAGTCTTGGTCTGGCTTGCAGTAGAGCCAAATGACTGAGAGGTGCTGGCAATGGTAGTCTCACTAACGTGGGCACGCCCTGAGTATGGTCTTCTTCAAGATAGACTTCAAAACACACTTCCATTAGGGAGGAAGAGGTCTTTTTCCAAGTACACGACCACAAACAATATCAAATTTGGGATTAAGCCCTACAAGAAAATTATAAATACAGTCAGCCTCCTCTAGTTTAGCATATTGTATACCATAATTTGGCGTGTCCCAAACTGTCTCCCTGCAAAAATCCATCTTTTGCCAAAGAAGGGAGAGCTTATTAAAAAAGGAAGTCACGTCTAGGGTCCTTTGTTTGCATTCGTCATTTGGCATTTTGACGCTTTGTGTAAAGGGCTTGAGTTATCTTATCAAGAACCCTTACTGGTGGCAACCTTCGAGGAACATCTTTATTGATTGGGACCATGAAAAATAATTTTGCCCATTTAATTTTTCTTCAATTTTTCTTCTGGAAAATTCCCTACAGACAATCTTAAAGAGCCAGTTATATAATTCAAAGGCAAATTAGGGAACAAAGTTGGTTCTTGGAATGCATCGACAACTCAGTTGGTTTGGAATGCGCTGAAGACTTGCCCGCTTCAACCCCTATCTGTTATGGAGTTGGTCAGTCTTGTTACCATAGAAAAAAGGTTGCTGTAAACGGTCAACGGACGGTGGCGCGTGAATGGACAGCTTTGACATATTTGCTGTAAAGGGTTGCTGTACGAAGGGCATGGGCGGCACGTAGGCCCACACGCTTGATAGAGGCGGCGCGTGAGGTTGATTCTGACCGTAGGGCTGCATGGACGACGTGCGAGGGTGGGCCCATTGTGACCGTCGGCTATTTCTGGAGCTGTTGAGCAACTTTTCCATGGCGGCGGTGGCGACTTTTGGTTCGGTTTGGGTTTCTTCTAAACTATTTTCTAGGGTTTTGTTGTTGCTTTTCTCTGATACCATATTGAAAGCAATAAAACATGAAACACCAACTTACGTGGAAACCCGTGTACTGGGTGAAAAATCACGATATTTTTGTTATTATTTTCTGATGAATTTACAATAGGTACAATTAGGGAGAATAAATAGAAAACATAATGAGATAAAAAAAGAAAAGATTTAGGAATTAGGTTAAATCTTTCCATAAACACTAGGGGCCTAGGGGCCTAGGGGCCAAACCCACTAATTCTAACAAGAATGTTTTTGCTAAGTTCGTGGCTTCTGTTTTATTTATTTATGTGTTTCATAAACACAATTGTTTTCATGAATTGCAGGCTATTCCACTTTTTGTGGGCTGTCCAGCATGCTTGAGGAATTTCCTAAATCTTTTTTGTGAGCTTTCCTGCTCTCCAAGGCAGAGTCTATTTATTAATGTGACGTCCATTGCTGAGGTAAAGCATGCTGTTTAGCTTTTACTTTAGTATTTGACAGCAATTATTCAATAGTATCATTACTGATGGGACAATATAATTCTGAAAAAAGAGCATTGGTGAACGAATGATTTCCATGGTTAGATGGGTTTCACTTTTATTCTAGTGTCTTTTCATTATGGAAACTCAAAAGTCAGTCATAAACCATACAACATTCTCTTCAGGATTAAACATTATGAATTGAGATATTGCTAGCTGTCTTCCTTTGAATTATGATGCAATTAGTAACTAGGGAACGAGCTTTACAAATGATGTTTATGCATAGGTTGGTGGAAGTATGACTGTGGATGGCATTGACTACTATGTAACTGAGAAGTTTGGAAAAGGTCTTTATGATTCGTGCAAGGATGTAAAATTTGGTACAATGAATACACGGGCCATAGATTTTGTTGGTGGTGGTGCTAAAAGTTTTGAAGGTAATATTTCTTGTATTGAGATTATCATCATAAAATATGTGCTTTATATATCGATGCGTCTGCTATCTATTTGACAAATTGCTTACCTATATTTCTTTTACATTGTTTGATATTATTTTTTCCTTTTAAGAGGGAAACAATTTCATGAATGAAATGAGGAGAATAAAAACTCCCAAAATCTCAAAGAGGTGCATTCAAATAAAGCTTTCTGATAGACCACCAGTTGTGGTACAATATAGCAGGAGGAAGAATCAAGGAATGA

mRNA sequence

ATGATCTTCTTTGTATCTATGCTGATGAGAGGGGAGGCTGATTTATCTGTCCCTGTGCGTTCCGGTTCTACTTTCGGGGAGAGACACGCAGCAGAGTACTGTGCTATGTATGATATATGTGGAACACGCAGTGATGGGAAGGTTCTGAATTGCCCTTATGGTTCGCCATCTGTGAAGCCTGATGAGCTGTTCTCAGCAAAAATTCAAAGTCTTTGTCCTACAATAAGTGGCAATGTTTGTTGTACTGAGGCTCAATTTGAGACATTACGGTCACAGGTTCAACAAGCTATTCCACTTTTTGTGGGCTGTCCAGCATGCTTGAGGAATTTCCTAAATCTTTTTTGTGAGCTTTCCTGCTCTCCAAGGCAGAGTCTATTTATTAATGTGACGTCCATTGCTGAGGTTGGTGGAAGTATGACTGTGGATGGCATTGACTACTATGTAACTGAGAAGTTTGGAAAAGGTCTTTATGATTCGTGCAAGGATGTAAAATTTGGTACAATGAATACACGGGCCATAGATTTTGTTGGTGGTGGTGCTAAAAGTTTTGAAGGAGGAAGAATCAAGGAATGA

Coding sequence (CDS)

ATGATCTTCTTTGTATCTATGCTGATGAGAGGGGAGGCTGATTTATCTGTCCCTGTGCGTTCCGGTTCTACTTTCGGGGAGAGACACGCAGCAGAGTACTGTGCTATGTATGATATATGTGGAACACGCAGTGATGGGAAGGTTCTGAATTGCCCTTATGGTTCGCCATCTGTGAAGCCTGATGAGCTGTTCTCAGCAAAAATTCAAAGTCTTTGTCCTACAATAAGTGGCAATGTTTGTTGTACTGAGGCTCAATTTGAGACATTACGGTCACAGGTTCAACAAGCTATTCCACTTTTTGTGGGCTGTCCAGCATGCTTGAGGAATTTCCTAAATCTTTTTTGTGAGCTTTCCTGCTCTCCAAGGCAGAGTCTATTTATTAATGTGACGTCCATTGCTGAGGTTGGTGGAAGTATGACTGTGGATGGCATTGACTACTATGTAACTGAGAAGTTTGGAAAAGGTCTTTATGATTCGTGCAAGGATGTAAAATTTGGTACAATGAATACACGGGCCATAGATTTTGTTGGTGGTGGTGCTAAAAGTTTTGAAGGAGGAAGAATCAAGGAATGA

Protein sequence

MIFFVSMLMRGEADLSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKPDELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCSPRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGAKSFEGGRIKE*
Homology
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BLAST of CsaV3_6G010220 vs. NCBI nr
Match: KAE8646829.1 (hypothetical protein Csa_005606 [Cucumis sativus])

HSP 1 Score: 395.2 bits (1014), Expect = 3.2e-106
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0 

Query: 1   MIFFVSMLMRGEADLSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP 60
           MIFFVSMLMRGEADLSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP
Sbjct: 1   MIFFVSMLMRGEADLSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP 60

Query: 61  DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCS 120
           DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCS
Sbjct: 61  DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCS 120

Query: 121 PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA 180
           PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA
Sbjct: 121 PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA 180

Query: 181 KSFEGGRIKE 191
           KSFEGGRIKE
Sbjct: 181 KSFEGGRIKE 190

[Close]
BLAST of CsaV3_6G010220 vs. NCBI nr
Match: XP_011656918.1 (NPC intracellular cholesterol transporter 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 383.3 bits (983), Expect = 1.3e-102
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0 

Query: 1   MIFFVSMLMRGEADLSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP 60
           MIFFVSMLMRGEADLSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP
Sbjct: 24  MIFFVSMLMRGEADLSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP 83

Query: 61  DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCS 120
           DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCS
Sbjct: 84  DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCS 143

Query: 121 PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA 180
           PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA
Sbjct: 144 PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA 203

Query: 181 KSFE 185
           KSFE
Sbjct: 204 KSFE 207

[Close]
BLAST of CsaV3_6G010220 vs. NCBI nr
Match: XP_011656920.1 (NPC intracellular cholesterol transporter 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 383.3 bits (983), Expect = 1.3e-102
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0 

Query: 1   MIFFVSMLMRGEADLSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP 60
           MIFFVSMLMRGEADLSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP
Sbjct: 24  MIFFVSMLMRGEADLSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP 83

Query: 61  DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCS 120
           DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCS
Sbjct: 84  DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCS 143

Query: 121 PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA 180
           PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA
Sbjct: 144 PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA 203

Query: 181 KSFE 185
           KSFE
Sbjct: 204 KSFE 207

[Close]
BLAST of CsaV3_6G010220 vs. NCBI nr
Match: XP_008448193.1 (PREDICTED: Niemann-Pick C1 protein-like isoform X1 [Cucumis melo])

HSP 1 Score: 370.2 bits (949), Expect = 1.1e-98
Identity = 180/184 (97.83%), Postives = 181/184 (98.37%), Query Frame = 0 

Query: 1   MIFFVSMLMRGEADLSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP 60
           MIF VSMLM GEA LSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP
Sbjct: 24  MIFLVSMLMGGEA-LSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP 83

Query: 61  DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCS 120
           DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPAC+RNFLNLFCELSCS
Sbjct: 84  DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACMRNFLNLFCELSCS 143

Query: 121 PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA 180
           PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA
Sbjct: 144 PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA 203

Query: 181 KSFE 185
           KSFE
Sbjct: 204 KSFE 206

[Close]
BLAST of CsaV3_6G010220 vs. NCBI nr
Match: XP_008448194.1 (PREDICTED: Niemann-Pick C1 protein-like isoform X2 [Cucumis melo])

HSP 1 Score: 370.2 bits (949), Expect = 1.1e-98
Identity = 180/184 (97.83%), Postives = 181/184 (98.37%), Query Frame = 0 

Query: 1   MIFFVSMLMRGEADLSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP 60
           MIF VSMLM GEA LSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP
Sbjct: 24  MIFLVSMLMGGEA-LSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP 83

Query: 61  DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCS 120
           DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPAC+RNFLNLFCELSCS
Sbjct: 84  DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACMRNFLNLFCELSCS 143

Query: 121 PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA 180
           PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA
Sbjct: 144 PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA 203

Query: 181 KSFE 185
           KSFE
Sbjct: 204 KSFE 206

[Close]
BLAST of CsaV3_6G010220 vs. ExPASy Swiss-Prot
Match: P56941 (NPC intracellular cholesterol transporter 1 OS=Sus scrofa OX=9823 GN=NPC1 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.1e-23
Identity = 59/158 (37.34%), Postives = 86/158 (54.43%), Query Frame = 0 

Query: 31  AEYCAMYDICGTRSDGKVLNCPY-GSPSVKPDELFSAKIQSLCP-TISGNV--CCTEAQF 90
           ++ C  Y  CG  S  K  NC Y G P   P++ +   +Q LCP    GNV  CC   Q 
Sbjct: 22  SQSCVWYGECGIASGDKRYNCRYSGPPKPLPEDGYDL-VQELCPGFFFGNVSLCCDVQQL 81

Query: 91  ETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCSPRQSLFINVTSIAEVGGSMT------ 150
            TL+  +Q  +     CP+C  N +NLFCEL+CSPRQS F+NVT+  +    +T      
Sbjct: 82  RTLKDNLQLPLQFLSRCPSCFYNLMNLFCELTCSPRQSQFLNVTATEDYVDPVTNQTKTN 141

Query: 151 VDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGG 179
           V  ++YYV E F   +Y++C+DV+  + N +A+  + G
Sbjct: 142 VKELEYYVGETFANAMYNACRDVEAPSSNEKALGLLCG 178

[Close]
BLAST of CsaV3_6G010220 vs. ExPASy Swiss-Prot
Match: Q12200 (NPC intracellular sterol transporter 1-related protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=NCR1 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 6.0e-23
Identity = 61/158 (38.61%), Postives = 84/158 (53.16%), Query Frame = 0 

Query: 34  CAMYDICGTRS-DGKVLNCPYG---SPSVKPDELFSAKIQSLCPTISGNV---CCTEAQF 93
           CAMY  CG +S  G  L CP      P V  DE  S  +  +C      V   CCT+ Q 
Sbjct: 23  CAMYGNCGKKSVFGNELPCPVPRSFEPPVLSDET-SKLLVEVCGEEWKEVRYACCTKDQV 82

Query: 94  ETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCSPRQSLFINVTSIAEVGGSM-TVDGID 153
             LR  +Q+A PL   CPACL+NF NLFC  +C+  Q  F+N+T + +       V  +D
Sbjct: 83  VALRDNLQKAQPLISSCPACLKNFNNLFCHFTCAADQGRFVNITKVEKSKEDKDIVAELD 142

Query: 154 YYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGAKSF 184
            ++   +    YDSCK++KF   N  A+D +GGGAK++
Sbjct: 143 VFMNSSWASEFYDSCKNIKFSATNGYAMDLIGGGAKNY 179

[Close]
BLAST of CsaV3_6G010220 vs. ExPASy Swiss-Prot
Match: O15118 (NPC intracellular cholesterol transporter 1 OS=Homo sapiens OX=9606 GN=NPC1 PE=1 SV=2)

HSP 1 Score: 107.5 bits (267), Expect = 1.7e-22
Identity = 58/158 (36.71%), Postives = 84/158 (53.16%), Query Frame = 0 

Query: 31  AEYCAMYDICGTRSDGKVLNCPY-GSPSVKPDELFSAKIQSLCP-TISGNV--CCTEAQF 90
           ++ C  Y  CG     K  NC Y G P   P + +   +Q LCP    GNV  CC   Q 
Sbjct: 22  SQSCVWYGECGIAYGDKRYNCEYSGPPKPLPKDGYDL-VQELCPGFFFGNVSLCCDVRQL 81

Query: 91  ETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCSPRQSLFINVTSIAEVGGSMT------ 150
           +TL+  +Q  +     CP+C  N LNLFCEL+CSPRQS F+NVT+  +    +T      
Sbjct: 82  QTLKDNLQLPLQFLSRCPSCFYNLLNLFCELTCSPRQSQFLNVTATEDYVDPVTNQTKTN 141

Query: 151 VDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGG 179
           V  + YYV + F   +Y++C+DV+  + N +A+  + G
Sbjct: 142 VKELQYYVGQSFANAMYNACRDVEAPSSNDKALGLLCG 178

[Close]
BLAST of CsaV3_6G010220 vs. ExPASy Swiss-Prot
Match: O35604 (NPC intracellular cholesterol transporter 1 OS=Mus musculus OX=10090 GN=Npc1 PE=1 SV=2)

HSP 1 Score: 102.8 bits (255), Expect = 4.3e-21
Identity = 52/158 (32.91%), Postives = 85/158 (53.80%), Query Frame = 0 

Query: 31  AEYCAMYDICGTRSDGKVLNCPY-GSPSVKPDELFSAKIQSLCPTI---SGNVCCTEAQF 90
           ++ C  Y  CG  +  K  NC Y G P   P + +   +Q LCP +   + ++CC   Q 
Sbjct: 22  SQSCVWYGECGIATGDKRYNCKYSGPPKPLPKDGYDL-VQELCPGLFFDNVSLCCDIQQL 81

Query: 91  ETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCSPRQSLFINVTSIAEVGGSMT------ 150
           +TL+S +Q  +     CP+C  N + LFCEL+CSP QS F+NVT+  +     T      
Sbjct: 82  QTLKSNLQLPLQFLSRCPSCFYNLMTLFCELTCSPHQSQFLNVTATEDYFDPKTQENKTN 141

Query: 151 VDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGG 179
           V  ++Y+V + F   +Y++C+DV+  + N +A+  + G
Sbjct: 142 VKELEYFVGQSFANAMYNACRDVEAPSSNEKALGLLCG 178

[Close]
BLAST of CsaV3_6G010220 vs. ExPASy Swiss-Prot
Match: Q9UHC9 (NPC1-like intracellular cholesterol transporter 1 OS=Homo sapiens OX=9606 GN=NPC1L1 PE=1 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 2.9e-17
Identity = 52/163 (31.90%), Postives = 77/163 (47.24%), Query Frame = 0 

Query: 29  HAAEYCAMYDICGTRSD--GKVL-----NCPYGSPSVKPDELFSAKIQSLCPTI----SG 88
           H   YCA YD CG   +  G ++     +C   +P+ K        +Q +CP +    + 
Sbjct: 28  HQPGYCAFYDECGKNPELSGSLMTLSNVSCLSNTPARKITGDHLILLQKICPRLYTGPNT 87

Query: 89  NVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCSPRQSLFINVTSIAEVGG 148
             CC+  Q  +L + +     L   CPAC  NF+NL C  +CSP QSLFINVT +A++G 
Sbjct: 88  QACCSAKQLVSLEASLSITKALLTRCPACSDNFVNLHCHNTCSPNQSLFINVTRVAQLGA 147

Query: 149 SM--TVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGG 179
                V   + +    F +  YDSC  V+     T A+  + G
Sbjct: 148 GQLPAVVAYEAFYQHSFAEQSYDSCSRVRVPAAATLAVGTMCG 190

[Close]
BLAST of CsaV3_6G010220 vs. ExPASy TrEMBL
Match: A0A1S3BJ43 (Niemann-Pick C1 protein-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490460 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 5.3e-99
Identity = 180/184 (97.83%), Postives = 181/184 (98.37%), Query Frame = 0 

Query: 1   MIFFVSMLMRGEADLSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP 60
           MIF VSMLM GEA LSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP
Sbjct: 24  MIFLVSMLMGGEA-LSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP 83

Query: 61  DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCS 120
           DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPAC+RNFLNLFCELSCS
Sbjct: 84  DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACMRNFLNLFCELSCS 143

Query: 121 PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA 180
           PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA
Sbjct: 144 PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA 203

Query: 181 KSFE 185
           KSFE
Sbjct: 204 KSFE 206

[Close]
BLAST of CsaV3_6G010220 vs. ExPASy TrEMBL
Match: A0A1S3BJR3 (Niemann-Pick C1 protein-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490460 PE=3 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 5.3e-99
Identity = 180/184 (97.83%), Postives = 181/184 (98.37%), Query Frame = 0 

Query: 1   MIFFVSMLMRGEADLSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP 60
           MIF VSMLM GEA LSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP
Sbjct: 24  MIFLVSMLMGGEA-LSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP 83

Query: 61  DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCS 120
           DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPAC+RNFLNLFCELSCS
Sbjct: 84  DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACMRNFLNLFCELSCS 143

Query: 121 PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA 180
           PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA
Sbjct: 144 PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA 203

Query: 181 KSFE 185
           KSFE
Sbjct: 204 KSFE 206

[Close]
BLAST of CsaV3_6G010220 vs. ExPASy TrEMBL
Match: A0A5A7U0V7 (Niemann-Pick C1 protein-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G001120 PE=3 SV=1)

HSP 1 Score: 367.9 bits (943), Expect = 2.7e-98
Identity = 179/184 (97.28%), Postives = 180/184 (97.83%), Query Frame = 0 

Query: 1   MIFFVSMLMRGEADLSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP 60
           MIF VSMLM GEA LSVPVRSG TFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP
Sbjct: 1   MIFLVSMLMGGEA-LSVPVRSGFTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP 60

Query: 61  DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCS 120
           DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPAC+RNFLNLFCELSCS
Sbjct: 61  DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACMRNFLNLFCELSCS 120

Query: 121 PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA 180
           PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA
Sbjct: 121 PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA 180

Query: 181 KSFE 185
           KSFE
Sbjct: 181 KSFE 183

[Close]
BLAST of CsaV3_6G010220 vs. ExPASy TrEMBL
Match: A0A6J1I473 (Niemann-Pick C1 protein-like OS=Cucurbita maxima OX=3661 GN=LOC111469740 PE=3 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 9.4e-96
Identity = 172/184 (93.48%), Postives = 176/184 (95.65%), Query Frame = 0 

Query: 1   MIFFVSMLMRGEADLSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP 60
           MIFFV+ML+ GEADLSVPVRS ST  ERH+ EYCAMYDICG RSDGKVLNCPYGSPSVKP
Sbjct: 23  MIFFVTMLIGGEADLSVPVRSASTSEERHSEEYCAMYDICGARSDGKVLNCPYGSPSVKP 82

Query: 61  DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCS 120
           DELFS KIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCS
Sbjct: 83  DELFSEKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCS 142

Query: 121 PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA 180
           PRQSLFINVTSIAEVGG MTVDGIDY+VTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA
Sbjct: 143 PRQSLFINVTSIAEVGGKMTVDGIDYFVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA 202

Query: 181 KSFE 185
           KSFE
Sbjct: 203 KSFE 206

[Close]
BLAST of CsaV3_6G010220 vs. ExPASy TrEMBL
Match: A0A6J1G6Q4 (Niemann-Pick C1 protein-like OS=Cucurbita moschata OX=3662 GN=LOC111451262 PE=3 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 8.0e-95
Identity = 171/184 (92.93%), Postives = 175/184 (95.11%), Query Frame = 0 

Query: 1   MIFFVSMLMRGEADLSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKP 60
           MIFFV+ML+ GEADLSVPVRS ST  ERH+ EYCAMYDICG RSDGKVLNCPYGSPSVKP
Sbjct: 23  MIFFVTMLIGGEADLSVPVRSASTSEERHSEEYCAMYDICGARSDGKVLNCPYGSPSVKP 82

Query: 61  DELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCS 120
           DELFS KIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCS
Sbjct: 83  DELFSEKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCS 142

Query: 121 PRQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA 180
           PRQSLFINVTSIAEVGG MTVDGIDY+VTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA
Sbjct: 143 PRQSLFINVTSIAEVGGKMTVDGIDYFVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGA 202

Query: 181 KSFE 185
           KS E
Sbjct: 203 KSSE 206

[Close]
BLAST of CsaV3_6G010220 vs. TAIR 10
Match: AT4G38350.1 (Patched family protein )

HSP 1 Score: 293.5 bits (750), Expect = 1.2e-79
Identity = 136/182 (74.73%), Postives = 156/182 (85.71%), Query Frame = 0 

Query: 2   IFFVSMLMRGEADLSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKPD 61
           +F  S+L+      S P  +      RH+ EYCAMYDICG RSDGKVLNCPY SPS++PD
Sbjct: 12  LFTFSLLLTANLTHSEPSNN------RHSKEYCAMYDICGHRSDGKVLNCPYASPSIQPD 71

Query: 62  ELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCSP 121
           ELFSAKIQSLCPTISGNVCCTE QF+TLRSQVQQA+P  VGCPACLRNFLNLFCELSCSP
Sbjct: 72  ELFSAKIQSLCPTISGNVCCTETQFDTLRSQVQQAVPFLVGCPACLRNFLNLFCELSCSP 131

Query: 122 RQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGAK 181
            QSLFINVTS+AEV G++TVDGIDY++T+ FG+GLY+SCK+VKFGTMNTRAI+FVGGGAK
Sbjct: 132 NQSLFINVTSVAEVSGNLTVDGIDYHITDTFGEGLYESCKEVKFGTMNTRAINFVGGGAK 187

Query: 182 SF 184
           +F
Sbjct: 192 NF 187

[Close]
BLAST of CsaV3_6G010220 vs. TAIR 10
Match: AT4G38350.2 (Patched family protein )

HSP 1 Score: 293.5 bits (750), Expect = 1.2e-79
Identity = 136/182 (74.73%), Postives = 156/182 (85.71%), Query Frame = 0 

Query: 2   IFFVSMLMRGEADLSVPVRSGSTFGERHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKPD 61
           +F  S+L+      S P  +      RH+ EYCAMYDICG RSDGKVLNCPY SPS++PD
Sbjct: 12  LFTFSLLLTANLTHSEPSNN------RHSKEYCAMYDICGHRSDGKVLNCPYASPSIQPD 71

Query: 62  ELFSAKIQSLCPTISGNVCCTEAQFETLRSQVQQAIPLFVGCPACLRNFLNLFCELSCSP 121
           ELFSAKIQSLCPTISGNVCCTE QF+TLRSQVQQA+P  VGCPACLRNFLNLFCELSCSP
Sbjct: 72  ELFSAKIQSLCPTISGNVCCTETQFDTLRSQVQQAVPFLVGCPACLRNFLNLFCELSCSP 131

Query: 122 RQSLFINVTSIAEVGGSMTVDGIDYYVTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGAK 181
            QSLFINVTS+AEV G++TVDGIDY++T+ FG+GLY+SCK+VKFGTMNTRAI+FVGGGAK
Sbjct: 132 NQSLFINVTSVAEVSGNLTVDGIDYHITDTFGEGLYESCKEVKFGTMNTRAINFVGGGAK 187

Query: 182 SF 184
           +F
Sbjct: 192 NF 187

[Close]
BLAST of CsaV3_6G010220 vs. TAIR 10
Match: AT1G42470.1 (Patched family protein )

HSP 1 Score: 260.8 bits (665), Expect = 8.8e-70
Identity = 116/157 (73.89%), Postives = 137/157 (87.26%), Query Frame = 0 

Query: 28  RHAAEYCAMYDICGTRSDGKVLNCPYGSPSVKPDELFSAKIQSLCPTISGNVCCTEAQFE 87
           + +A YCAMYDICG RSDGKVLNCP+  PSVKPD+L S+KIQSLCPTI+GNVCCTE QF+
Sbjct: 13  KQSAGYCAMYDICGARSDGKVLNCPFNIPSVKPDDLLSSKIQSLCPTITGNVCCTETQFD 72

Query: 88  TLRSQVQQAIPLFVGCPACLRNFLNLFCELSCSPRQSLFINVTSIAEVGGSMTVDGIDYY 147
           TLRSQVQQAIP  VGCPACLRNFLNLFCEL+CSP QSLFINVTS  +V  + TVDGI YY
Sbjct: 73  TLRSQVQQAIPFIVGCPACLRNFLNLFCELTCSPDQSLFINVTSTTKVKNNSTVDGIQYY 132

Query: 148 VTEKFGKGLYDSCKDVKFGTMNTRAIDFVGGGAKSFE 185
           +T+ FG G+Y+SCK+VKFG+ N+RA+DF+G GAK+F+
Sbjct: 133 ITDDFGAGMYESCKNVKFGSSNSRALDFLGAGAKNFK 169

The following BLAST results are available for this feature:
BLAST of CsaV3_6G010220 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646829.13.2e-106100.00hypothetical protein Csa_005606 [Cucumis sativus][more]
XP_011656918.11.3e-102100.00NPC intracellular cholesterol transporter 1 isoform X1 [Cucumis sativus][more]
XP_011656920.11.3e-102100.00NPC intracellular cholesterol transporter 1 isoform X2 [Cucumis sativus][more]
XP_008448193.11.1e-9897.83PREDICTED: Niemann-Pick C1 protein-like isoform X1 [Cucumis melo][more]
XP_008448194.11.1e-9897.83PREDICTED: Niemann-Pick C1 protein-like isoform X2 [Cucumis melo][more]
BLAST of CsaV3_6G010220 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P569412.1e-2337.34NPC intracellular cholesterol transporter 1 OS=Sus scrofa OX=9823 GN=NPC1 PE=2 S... [more]
Q122006.0e-2338.61NPC intracellular sterol transporter 1-related protein 1 OS=Saccharomyces cerevi... [more]
O151181.7e-2236.71NPC intracellular cholesterol transporter 1 OS=Homo sapiens OX=9606 GN=NPC1 PE=1... [more]
O356044.3e-2132.91NPC intracellular cholesterol transporter 1 OS=Mus musculus OX=10090 GN=Npc1 PE=... [more]
Q9UHC92.9e-1731.90NPC1-like intracellular cholesterol transporter 1 OS=Homo sapiens OX=9606 GN=NPC... [more]
BLAST of CsaV3_6G010220 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BJ435.3e-9997.83Niemann-Pick C1 protein-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490460 ... [more]
A0A1S3BJR35.3e-9997.83Niemann-Pick C1 protein-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490460 ... [more]
A0A5A7U0V72.7e-9897.28Niemann-Pick C1 protein-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A6J1I4739.4e-9693.48Niemann-Pick C1 protein-like OS=Cucurbita maxima OX=3661 GN=LOC111469740 PE=3 SV... [more]
A0A6J1G6Q48.0e-9592.93Niemann-Pick C1 protein-like OS=Cucurbita moschata OX=3662 GN=LOC111451262 PE=3 ... [more]
BLAST of CsaV3_6G010220 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G38350.11.2e-7974.73Patched family protein [more]
AT4G38350.21.2e-7974.73Patched family protein [more]
AT1G42470.18.8e-7073.89Patched family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032190Niemann-Pick C1, N-terminalPFAMPF16414NPC1_Ncoord: 32..181
e-value: 2.2E-49
score: 168.3
NoneNo IPR availablePANTHERPTHR45727NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1coord: 14..184
NoneNo IPR availablePANTHERPTHR45727:SF7PATCHED FAMILY PROTEINcoord: 14..184

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G010220.1CsaV3_6G010220.1mRNA