CsaV3_6G009620 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G009620
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 7783641 .. 7783952 (-)
RNA-Seq ExpressionCsaV3_6G009620
SyntenyCsaV3_6G009620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACTTAAATATCCTAATTACGTCAAAAGCAAGGGGAGGCACACAACTGGCGCTGGGCAGAGCGCAACTGCTCTGTTCAGCACTCTTAGCCACAATCTTACAAAAGCATGGCGTCGTTTTGAGCACCAGAGCGCTGAGGAAGCATGCTCGTGCGCAACTGCGCTCCAACTGTTCTCTAAATGCAATTGTTCCTGATTTTAAGTCAATAAAAGCCCGAAATTTATCCAATCTTCACCTCCATTTTCTGTATTCTTCATCCCCCTCGTCAATCTCCCCCATTCTTCACTTGTATTTTCCTACATTTTATTGA

mRNA sequence

ATGCACTTAAATATCCTAATTACGTCAAAAGCAAGGGGAGGCACACAACTGGCGCTGGGCAGAGCGCAACTGCTCTGTTCAGCACTCTTAGCCACAATCTTACAAAAGCATGGCGTCGTTTTGAGCACCAGAGCGCTGAGGAAGCATGCTCGTGCGCAACTGCGCTCCAACTGTTCTCTAAATGCAATTGTTCCTGATTTTAAGTCAATAAAAGCCCGAAATTTATCCAATCTTCACCTCCATTTTCTGTATTCTTCATCCCCCTCGTCAATCTCCCCCATTCTTCACTTGTATTTTCCTACATTTTATTGA

Coding sequence (CDS)

ATGCACTTAAATATCCTAATTACGTCAAAAGCAAGGGGAGGCACACAACTGGCGCTGGGCAGAGCGCAACTGCTCTGTTCAGCACTCTTAGCCACAATCTTACAAAAGCATGGCGTCGTTTTGAGCACCAGAGCGCTGAGGAAGCATGCTCGTGCGCAACTGCGCTCCAACTGTTCTCTAAATGCAATTGTTCCTGATTTTAAGTCAATAAAAGCCCGAAATTTATCCAATCTTCACCTCCATTTTCTGTATTCTTCATCCCCCTCGTCAATCTCCCCCATTCTTCACTTGTATTTTCCTACATTTTATTGA

Protein sequence

MHLNILITSKARGGTQLALGRAQLLCSALLATILQKHGVVLSTRALRKHARAQLRSNCSLNAIVPDFKSIKARNLSNLHLHFLYSSSPSSISPILHLYFPTFY*
Homology
[Close]
BLAST of CsaV3_6G009620 vs. NCBI nr
Match: KGN46607.1 (hypothetical protein Csa_005205 [Cucumis sativus])

HSP 1 Score: 198.0 bits (502), Expect = 4.1e-47
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MHLNILITSKARGGTQLALGRAQLLCSALLATILQKHGVVLSTRALRKHARAQLRSNCSL 60
           MHLNILITSKARGGTQLALGRAQLLCSALLATILQKHGVVLSTRALRKHARAQLRSNCSL
Sbjct: 1   MHLNILITSKARGGTQLALGRAQLLCSALLATILQKHGVVLSTRALRKHARAQLRSNCSL 60

Query: 61  NAIVPDFKSIKARNLSNLHLHFLYSSSPSSISPILHLYFPTFY 104
           NAIVPDFKSIKARNLSNLHLHFLYSSSPSSISPILHLYFPTFY
Sbjct: 61  NAIVPDFKSIKARNLSNLHLHFLYSSSPSSISPILHLYFPTFY 103

[Close]
BLAST of CsaV3_6G009620 vs. ExPASy TrEMBL
Match: A0A0A0KDY6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G112455 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.0e-47
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0 

Query: 1   MHLNILITSKARGGTQLALGRAQLLCSALLATILQKHGVVLSTRALRKHARAQLRSNCSL 60
           MHLNILITSKARGGTQLALGRAQLLCSALLATILQKHGVVLSTRALRKHARAQLRSNCSL
Sbjct: 1   MHLNILITSKARGGTQLALGRAQLLCSALLATILQKHGVVLSTRALRKHARAQLRSNCSL 60

Query: 61  NAIVPDFKSIKARNLSNLHLHFLYSSSPSSISPILHLYFPTFY 104
           NAIVPDFKSIKARNLSNLHLHFLYSSSPSSISPILHLYFPTFY
Sbjct: 61  NAIVPDFKSIKARNLSNLHLHFLYSSSPSSISPILHLYFPTFY 103

The following BLAST results are available for this feature:
BLAST of CsaV3_6G009620 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46607.14.1e-47100.00hypothetical protein Csa_005205 [Cucumis sativus][more]
BLAST of CsaV3_6G009620 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G009620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDY62.0e-47100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G112455 PE=4 SV=1[more]
BLAST of CsaV3_6G009620 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G009620.1CsaV3_6G009620.1mRNA