CsaV3_6G009440 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G009440
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 7589172 .. 7589836 (-)
RNA-Seq ExpressionCsaV3_6G009440
SyntenyCsaV3_6G009440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCCCATCTTCTGACTACTCTTTCCAGCTATCAGATGGTGGATGGAGTTAATCTGGTCGTGTCCTTCTCATCTTTTAGTTTGTGGTAAATGTCCATGTTTTCTCTACATATTATTTCTTGATGAGAGGTGCAAAATTTCATTCGTAATTTTGGTCTTTTTTGGGTAGGGTGCCAGTGCAATCATCCTTCTGCACCATCAATGTCGTTGCTGTATGATTGAAAATTTACTTTGTAGTTCAGTTATTCATGAATCTTCCTACTCTTTTCAACATATATTCAACCGCCAGTAGCAGATTAAGGACAATTCATGTATGACCTTTCATGAATCGTTGTTCTATACGTTGTACAGTGTCATTGAGTTCTAAGATTAAGGGCAATTCATCTTGTGGAGAAATCGAGATTTATTTCCATGGCACTTCGCCGCAAGTTCCTTTTCTTCTGTGTTATTATAGGCACCTAAAAGTTATCCTATTTGTTCAAAACCATCATTTCATGTTCTTCGAAACTTCTCCATTATTCTTTCACCACCTAAATGATCTCTTCTTTGTTATTTGTTTCAGGAATGACAACCATGAGTGGGTAGTCTTAGCAGCAGGTGTAAGCCGAAAGGGAAGTCGTGCAAACGATGCATGGTTCATGGCTCCAACGGCCATTAACTAA

mRNA sequence

ATGGCTGCCCATCTTCTGACTACTCTTTCCAGCTATCAGATGGTGGATGGAGTTAATCTGGTCGTGTCCTTCTCATCTTTTAGTTTGTGGAATGACAACCATGAGTGGGTAGTCTTAGCAGCAGGTGTAAGCCGAAAGGGAAGTCGTGCAAACGATGCATGGTTCATGGCTCCAACGGCCATTAACTAA

Coding sequence (CDS)

ATGGCTGCCCATCTTCTGACTACTCTTTCCAGCTATCAGATGGTGGATGGAGTTAATCTGGTCGTGTCCTTCTCATCTTTTAGTTTGTGGAATGACAACCATGAGTGGGTAGTCTTAGCAGCAGGTGTAAGCCGAAAGGGAAGTCGTGCAAACGATGCATGGTTCATGGCTCCAACGGCCATTAACTAA

Protein sequence

MAAHLLTTLSSYQMVDGVNLVVSFSSFSLWNDNHEWVVLAAGVSRKGSRANDAWFMAPTAIN*
Homology
[Close]
BLAST of CsaV3_6G009440 vs. NCBI nr
Match: KGN46593.1 (hypothetical protein Csa_005615 [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 2.4e-26
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MAAHLLTTLSSYQMVDGVNLVVSFSSFSLWNDNHEWVVLAAGVSRKGSRANDAWFMAPTA 60
          MAAHLLTTLSSYQMVDGVNLVVSFSSFSLWNDNHEWVVLAAGVSRKGSRANDAWFMAPTA
Sbjct: 1  MAAHLLTTLSSYQMVDGVNLVVSFSSFSLWNDNHEWVVLAAGVSRKGSRANDAWFMAPTA 60

Query: 61 IN 63
          IN
Sbjct: 61 IN 62

[Close]
BLAST of CsaV3_6G009440 vs. ExPASy TrEMBL
Match: A0A0A0KAS9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G110850 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-26
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 0 

Query: 1  MAAHLLTTLSSYQMVDGVNLVVSFSSFSLWNDNHEWVVLAAGVSRKGSRANDAWFMAPTA 60
          MAAHLLTTLSSYQMVDGVNLVVSFSSFSLWNDNHEWVVLAAGVSRKGSRANDAWFMAPTA
Sbjct: 1  MAAHLLTTLSSYQMVDGVNLVVSFSSFSLWNDNHEWVVLAAGVSRKGSRANDAWFMAPTA 60

Query: 61 IN 63
          IN
Sbjct: 61 IN 62

The following BLAST results are available for this feature:
BLAST of CsaV3_6G009440 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46593.12.4e-26100.00hypothetical protein Csa_005615 [Cucumis sativus][more]
BLAST of CsaV3_6G009440 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G009440 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAS91.2e-26100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G110850 PE=4 SV=1[more]
BLAST of CsaV3_6G009440 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G009440.1CsaV3_6G009440.1mRNA