CsaV3_6G008990 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGGCAATTAAACTTAAATCAAAATATTGGGTTTCTTATGACATTTTAGAAGTAAAGAACAGTCTCAAACAGCAGCCCAAATCAGCGTCAAAAAGTAATCTTTAATGCTTTGAGGCAGTTGTGACCAAAACTCAAATCCAAAATGTCGAATCGCGACCTTACTGATTCCGAGCACGACGAGGAAACTCCTAATTCTTCAACTACCCACTCAAAGAAGAAGCTCAGAGGTTCCATGAATGGCAGAAACGTCAAGGATGTGCCGGAGTATGAGAAACAGAGGATTTCTAGGATCGCCGAGAACAAGAAGAGAATGGAGGCCCTTGGATTGGCCAAAATGGCCACCTCATTTTTGGATTCCTCCAAAAATTTGAGGAAGACTGATATAAAGGGGAAGCGGAAACTGGGGGAAGCTGCCGATGATGATTATAAGCCTGGCAATGATTCTTCAAGTTCTGAAGATGAGGATGACTCGGAGGAAGGGGATGAAGATTTTGGAAGTGGGAAAGTTTCTGGGTCTCGTGGAACGAAGGTGATCACTCTCCCTTTCCTGTGCATGTACTGTTGTATTCATGATTCTGGGGTGTTTCTTAGCTTGGTTAACTGATAATTTACTGTTGTGATCATTAATCAACTACTGTGTACATGATGTTCAATGAGTAGAATATTTAACATTTTTCCTGTTTCCATGTTTGTAATATGGTATGGTGAGAATATGAATTCAATAGACAAACATCCCTAAAAGGAGCTTATAAGAATCTTCTTAGTTAGCTTCCTAGGAAAAAAAAACTTTTAAGTCTTTGGTAAAAGAGTTGAGGATGTCTTTCTCCCTTTAGAATTGGAGAAGAGCTTATTGATGCTAGAGTGGAAATTTTATGAGAAGCTTTGAGGAAGATTTAGAGTTTGTAGGAGGTTATTAGTTTTTTTTTCTCTTAGAAAAAAGTCCTGAACAAATTGTGGTGCAACTTTTAATGAAAATAATGTGAAAGAGATCAAGGAGCATGGAAAGATTTGGAGAAAGATAAGAGGATACTTCTAGGTTTTGGGAAGTCTTCCCTATGAGGTTTTGTATTCTTTCTCTGAGCTTTTTGATGGATTACCAAATATGGCAAAAGCATTGTTCAATACTTTAATTGGAAAGGAACCACAGCCCACCAGCTTTCCCTAGCTCTTTGTATACCTCCTTTTTACTCGATAGATTCAGTCATTTTTTGTCTCTCTCTCTCTATATATATTCAGGGTACTTGAGAAGGGGGACTCATAATCAGAACATGTATACTTTTTATGATGGGGTCCTCACAAATATTATGGAACAAGAGCAAAAGTCTCAGTTTCACTTTTAGAAGTAGAGAAAAGAATGCAATTGTGTGTTATCGCATTCAGGGAACTTGAGTCCTGCCCAAAATATATTAAAAAGGAAAATGTATATTCTGCATGTATTTTATGTACAAATGCAAAATTCATCTATTTCAACTCGATCTAGTTGGTGGCCTAAATAGTGGTTAAATTTTATTTCAGGGAAAGAATAGAGGATCAGAAACAAAAAGGAAAGTTTCTGTCAAGAAATCAAACAACTTTAACCATGAGGATGATGATGATGCATTGCAACAGGTAGATTCATAATATTCCATCAATATTTTGTAATATAAGAAAGCACAAACACGCTAAATATATCCTATGGTTTCCCAAGCAGGCCATCAAACTTTCACTTCAAGATTCTGGCGAAAATTCTGATGCACAGGTGCAAGGTTCTTTTGAAAATGTTAGAAGGAAAAACTTGAAGAATCAGGAAGCGAGAGGAGGGATGAAGAGAAAAGGATTGGTAGCATTTTTACTCATAATGTAGTATGATAACCTTGGTGATCCTTTATTCTTCTTTACCTCAATGCTTCTTCTTCTCATCTGATCTGCAGTTCACTAGTCGGATGCAGATGAATGAGGATGAACTTATCATGAACTTCTATTGTTTTGATGGTATTTTGTATATTGGTAAGATATTAACTGCACTTTAAAGTAATATTTACTACTGACCTGTTGAACTTGGCTAATAGAGTCGTGGAAAGGAGGCATTACTGTTCGTGACTTGAAAAGAGTGGCAGATGCTCATGATTTTACTTGGTCTGAGATAGAATTAAGGGATATGATTGATTGCTTTGACAATGATGGAGATGGGAAGGTTAGTTTCTTGGTTTCATGTTCTTCTTTCATCTTTTAATCCCATTCGTTCTCTTTATACTATGAATCGTAATCTAATATACATGTTCTTTATTTTGTCATTCAAGTTTTGAAATTTTTATTAACACCATCAAACTTATCCATTATTTTATATTCTTAGTCCTTTCTATAGCTGCATAAAAACACCAATGGCTTACAACATGATACCATATAGAGTTGACTTGTTTAGGAAAAGACATCTTGACATCAATTGCAATGATGTACTGAGTTTAACCTTTTACATTACGTTAACAAACTTCTTCAAGTTATAGTTTTTTCAAAAAAAAATTGAAGCATCTTCCATGCTTAATTTTTAAAATGAAACAAGATTTATGAATTATCTTTATGGTGGTTGTTCTGATAATGCGGTATGGTAGTTGGTACAAAAAAGATCAAAACGTTAATTCTACCTACCAAAGAAATAACAAAATGTACTTTATTTTTTGGACAAGAAAATGAAATAATAATAGTAAAGTGCCTCAATTTCAGCACCGTTGGAAGGCTGCAGATAGTTTGTGTTGTTTTATATCTCAAACTACTGGAATATTTTTCTAACTGAAAATTTCATTATCGACCAGTTACTTATATGAATACTTTTTGGACAAGAAAATGAAACAATAATAGTTGCTTGTTGCTTCATCCAGTAAATATAATTACTTAGATCTAACATCATGACAAACTAATCTTGCTTGTATCTCACCTTTGATGCTCCTCAAGATATACCTGTCCTTCATTTTCTTTTCTATAACAGTTAAATCTGGATGATTTCCGGAGAATAGCTGGTCGATGTAACATGATAAAAGAGTCCATCACATGATGGAATCGGACATTGATAGACTGGTGCACCAATGTGTGAAGGAGAATTTATAGCAAGAATTGAAGAGCATTGTGATATTGAATCTCTGTACATTTTTCTAGGACAATCAAATTCAGGTATGCTCTTTATCCAGCTATTCAGAAGCAAATTGTGAGGGTTGTTGCAAAGAGAATCAAAATTTTCTTGTTGGAAGGAAAAACCCTAACGATCATCATAAGATGAGGGAGAATAATGGCTCTGGACAACAAGAGTATCCGATCATGATTTTGTTGAATTTCAAAATATTAAGGAAAGCATTTGAACTTGTCATTATAATGTAAAACTCTGACCCATGTGTTTCAAGGAAAATATGCATGAGCGCATTCGGTTCTTGTCAAAACTTACTCCTTTCTAAAATTTTGTGTTATGGTAACACTGAATCTAGAATTACAAGATCTTGATTATTATGTCTGTTTGAAGTTTTATTACTCTCGTATTTCTGTTTGGCATTGTCCTGTTTTTTAATCTTGTTCGACTATGACATTAGCCGTATTGTAAGTTTAAACTCATTTTCTCTAAATAGTCTATCTTCTTTCCTTAGGTCTTGATTTTCTATGACCTATATAGAGTCTTAAGAGAGATCATGAAAGTAGCAGCAAAAAGCATGAATAAAATAAACACGTTACATACACACACATAGATTCTATATATAAAAGCCAATCAAAACTTCAACTAAACACACACAACTATTTTCTATATAAACAAACATAAAGAAGAGAGTAAAAATATTTGGTGGGGAATTAGTGAAGTGTATTATTTTATATATATATATTGTGTTGTAGTGTTGGAAGTAAGTAAGTAATAAGATAACTAGAGAATTGGAATGGGAGAGTTGAGCTGAAAGGAGTGGATGAGATCAGAATCAGGCAAGTTGAGAGGTGGCAAAGAGAAATGGCTATAAGTGGAGCTTCTTCTTCTGATTTCCTCCAAGCTGAGCAGAGCTGAAACTGTGTTTCTGAAAATTCCTTCACTACCAACTGAAATATTAGGCTTGTTTTCATTGTTGAATTGTTGTTTTGGGGTCGGGAAAATTGCATCAATGCTAACCTCACAATCTTTGATCATCTTAGAGAGTGAATCTGTTTTGTAGAATGGCTGTTGGAGTATGCTTTGAATGAATGGTAGCCTTAATAATCCCCCTGTTCTCTTGTCATATTTCTTTAGAATTTTCCCTAATCCTGCAATATGAAACCATATTTAGTCTGTTTCTTCTTGTGTGCATATTCCAATCTTTTACTGCTCTTTCGAAACTTAGGTAAACGATATATCAGTTTATTTCATAGACATCAGGTTATCTCAAGCCATAATTTAAAGCTTAAAAAGAAATAATATGACAGATGTGTTAATCTACTTTTTAAATTTTAGATTAAAATAAAGTTGAATTACCTGTATAATTAAGATTGCTGTAGTTGAGTAAGAGAACCATTTCACCATGCAAATTCACTATGTCTTCTCTAATTTCTTGTTTATGATCATCCATTTCATTTCCACGTGGACCCCAACTTTCCAAAATTCTCTGTCTCAATTCCTACGTTATCAAACATAAAATATAATTAACCATCAAACATAAAAATGTCAATAACGAATAAGAGGTCGAATAAGAAGTCGTAGCTAGACTTTGACACTCACGAATATCATGTTTTTTTCTTCCCACGTTTAAATAGAATAAATTTCAGCATCTTTATTTCTTTAGTTAAAAGATGTAAAGTTATAAAGCTTACTCATTGACATAATATGGACGTCCATAGAGATAGGTGTTAAAATCTTATTAAAG ATGTCGAATCGCGACCTTACTGATTCCGAGCACGACGAGGAAACTCCTAATTCTTCAACTACCCACTCAAAGAAGAAGCTCAGAGGTTCCATGAATGGCAGAAACGTCAAGGATGTGCCGGAGTATGAGAAACAGAGGATTTCTAGGATCGCCGAGAACAAGAAGAGAATGGAGGCCCTTGGATTGGCCAAAATGGCCACCTCATTTTTGGATTCCTCCAAAAATTTGAGGAAGACTGATATAAAGGGGAAGCGGAAACTGGGGGAAGCTGCCGATGATGATTATAAGCCTGGCAATGATTCTTCAAGTTCTGAAGATGAGGATGACTCGGAGGAAGGGGATGAAGATTTTGGAAGTGGGAAAGTTTCTGGGTCTCGTGGAACGAAGGGAAAGAATAGAGGATCAGAAACAAAAAGGAAAGTTTCTGTCAAGAAATCAAACAACTTTAACCATGAGGATGATGATGATGCATTGCAACAGGCCATCAAACTTTCACTTCAAGATTCTGGCGAAAATTCTGATGCACAGGTGCAAGGTTCTTTTGAAAATGTTAGAAGGAAAAACTTGAAGAATCAGGAAGCGAGAGGAGGGATGAAGAGAAAAGGATTGTTCACTAGTCGGATGCAGATGAATGAGGATGAACTTATCATGAACTTCTATTGTTTTGATGAGTCGTGGAAAGGAGGCATTACTGTTCGTGACTTGAAAAGAGTGGCAGATGCTCATGATTTTACTTGGTCTGAGATAGAATTAAGGGATATGATTGATTGCTTTGACAATGATGGAGATGGGAAGTTAAATCTGGATGATTTCCGGAGAATAGCTGGTCGATGTAACATGATAAAAGAGTCCATCACATGA ATGTCGAATCGCGACCTTACTGATTCCGAGCACGACGAGGAAACTCCTAATTCTTCAACTACCCACTCAAAGAAGAAGCTCAGAGGTTCCATGAATGGCAGAAACGTCAAGGATGTGCCGGAGTATGAGAAACAGAGGATTTCTAGGATCGCCGAGAACAAGAAGAGAATGGAGGCCCTTGGATTGGCCAAAATGGCCACCTCATTTTTGGATTCCTCCAAAAATTTGAGGAAGACTGATATAAAGGGGAAGCGGAAACTGGGGGAAGCTGCCGATGATGATTATAAGCCTGGCAATGATTCTTCAAGTTCTGAAGATGAGGATGACTCGGAGGAAGGGGATGAAGATTTTGGAAGTGGGAAAGTTTCTGGGTCTCGTGGAACGAAGGGAAAGAATAGAGGATCAGAAACAAAAAGGAAAGTTTCTGTCAAGAAATCAAACAACTTTAACCATGAGGATGATGATGATGCATTGCAACAGGCCATCAAACTTTCACTTCAAGATTCTGGCGAAAATTCTGATGCACAGGTGCAAGGTTCTTTTGAAAATGTTAGAAGGAAAAACTTGAAGAATCAGGAAGCGAGAGGAGGGATGAAGAGAAAAGGATTGTTCACTAGTCGGATGCAGATGAATGAGGATGAACTTATCATGAACTTCTATTGTTTTGATGAGTCGTGGAAAGGAGGCATTACTGTTCGTGACTTGAAAAGAGTGGCAGATGCTCATGATTTTACTTGGTCTGAGATAGAATTAAGGGATATGATTGATTGCTTTGACAATGATGGAGATGGGAAGTTAAATCTGGATGATTTCCGGAGAATAGCTGGTCGATGTAACATGATAAAAGAGTCCATCACATGA MSNRDLTDSEHDEETPNSSTTHSKKKLRGSMNGRNVKDVPEYEKQRISRIAENKKRMEALGLAKMATSFLDSSKNLRKTDIKGKRKLGEAADDDYKPGNDSSSSEDEDDSEEGDEDFGSGKVSGSRGTKGKNRGSETKRKVSVKKSNNFNHEDDDDALQQAIKLSLQDSGENSDAQVQGSFENVRRKNLKNQEARGGMKRKGLFTSRMQMNEDELIMNFYCFDESWKGGITVRDLKRVADAHDFTWSEIELRDMIDCFDNDGDGKLNLDDFRRIAGRCNMIKESIT* Homology
BLAST of CsaV3_6G008990 vs. NCBI nr
Match: XP_004140495.1 (uncharacterized protein LOC101206207 [Cucumis sativus] >KGN46547.1 hypothetical protein Csa_005249 [Cucumis sativus]) HSP 1 Score: 545.8 bits (1405), Expect = 2.2e-151 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
BLAST of CsaV3_6G008990 vs. NCBI nr
Match: KAA0039753.1 (EF_hand_5 domain-containing protein [Cucumis melo var. makuwa] >TYK24744.1 EF_hand_5 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 451.8 bits (1161), Expect = 4.3e-123 Identity = 240/270 (88.89%), Postives = 252/270 (93.33%), Query Frame = 0
BLAST of CsaV3_6G008990 vs. NCBI nr
Match: XP_016902477.1 (PREDICTED: uncharacterized protein LOC103499070 [Cucumis melo]) HSP 1 Score: 442.2 bits (1136), Expect = 3.4e-120 Identity = 241/290 (83.10%), Postives = 253/290 (87.24%), Query Frame = 0
BLAST of CsaV3_6G008990 vs. NCBI nr
Match: XP_038874842.1 (centrin-1-like [Benincasa hispida]) HSP 1 Score: 407.9 bits (1047), Expect = 7.2e-110 Identity = 220/265 (83.02%), Postives = 237/265 (89.43%), Query Frame = 0
BLAST of CsaV3_6G008990 vs. NCBI nr
Match: XP_022959491.1 (caltractin-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 392.5 bits (1007), Expect = 3.1e-105 Identity = 217/281 (77.22%), Postives = 241/281 (85.77%), Query Frame = 0
BLAST of CsaV3_6G008990 vs. ExPASy Swiss-Prot
Match: Q32LE3 (Centrin-1 OS=Bos taurus OX=9913 GN=CETN1 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.5e-06 Identity = 27/69 (39.13%), Postives = 44/69 (63.77%), Query Frame = 0
BLAST of CsaV3_6G008990 vs. ExPASy Swiss-Prot
Match: P41209 (Centrin-1 OS=Mus musculus OX=10090 GN=Cetn1 PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.5e-06 Identity = 25/69 (36.23%), Postives = 46/69 (66.67%), Query Frame = 0
BLAST of CsaV3_6G008990 vs. ExPASy Swiss-Prot
Match: P43645 (Caltractin (Fragment) OS=Spermatozopsis similis OX=3192 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 1.0e-05 Identity = 25/70 (35.71%), Postives = 44/70 (62.86%), Query Frame = 0
BLAST of CsaV3_6G008990 vs. ExPASy Swiss-Prot
Match: Q12798 (Centrin-1 OS=Homo sapiens OX=9606 GN=CETN1 PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 1.0e-05 Identity = 25/69 (36.23%), Postives = 45/69 (65.22%), Query Frame = 0
BLAST of CsaV3_6G008990 vs. ExPASy Swiss-Prot
Match: Q2TBN3 (Centrin-2 OS=Bos taurus OX=9913 GN=CETN2 PE=2 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 1.3e-05 Identity = 26/69 (37.68%), Postives = 43/69 (62.32%), Query Frame = 0
BLAST of CsaV3_6G008990 vs. ExPASy TrEMBL
Match: A0A0A0KDV1 (EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G108450 PE=4 SV=1) HSP 1 Score: 545.8 bits (1405), Expect = 1.1e-151 Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0
BLAST of CsaV3_6G008990 vs. ExPASy TrEMBL
Match: A0A5D3DMC4 (EF_hand_5 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003070 PE=4 SV=1) HSP 1 Score: 451.8 bits (1161), Expect = 2.1e-123 Identity = 240/270 (88.89%), Postives = 252/270 (93.33%), Query Frame = 0
BLAST of CsaV3_6G008990 vs. ExPASy TrEMBL
Match: A0A1S4E2M5 (uncharacterized protein LOC103499070 OS=Cucumis melo OX=3656 GN=LOC103499070 PE=4 SV=1) HSP 1 Score: 442.2 bits (1136), Expect = 1.7e-120 Identity = 241/290 (83.10%), Postives = 253/290 (87.24%), Query Frame = 0
BLAST of CsaV3_6G008990 vs. ExPASy TrEMBL
Match: A0A6J1H502 (caltractin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460448 PE=4 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 1.5e-105 Identity = 217/281 (77.22%), Postives = 241/281 (85.77%), Query Frame = 0
BLAST of CsaV3_6G008990 vs. ExPASy TrEMBL
Match: A0A6J1KWC6 (caltractin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499295 PE=4 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 2.0e-105 Identity = 217/281 (77.22%), Postives = 240/281 (85.41%), Query Frame = 0
BLAST of CsaV3_6G008990 vs. TAIR 10
Match: AT1G73440.1 (calmodulin-related ) HSP 1 Score: 155.2 bits (391), Expect = 7.8e-38 Identity = 117/279 (41.94%), Postives = 161/279 (57.71%), Query Frame = 0
BLAST of CsaV3_6G008990 vs. TAIR 10
Match: AT3G50360.1 (centrin2 ) HSP 1 Score: 46.2 bits (108), Expect = 5.1e-05 Identity = 22/66 (33.33%), Postives = 39/66 (59.09%), Query Frame = 0
BLAST of CsaV3_6G008990 vs. TAIR 10
Match: AT4G37010.1 (centrin 2 ) HSP 1 Score: 43.5 bits (101), Expect = 3.3e-04 Identity = 21/65 (32.31%), Postives = 37/65 (56.92%), Query Frame = 0
BLAST of CsaV3_6G008990 vs. TAIR 10
Match: AT4G37010.2 (centrin 2 ) HSP 1 Score: 43.5 bits (101), Expect = 3.3e-04 Identity = 21/65 (32.31%), Postives = 37/65 (56.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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