CsaV3_6G008050 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G008050
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	TCP transcription factor
Location	chr6: 6456718 .. 6457596 (-)
RNA-Seq Expression	CsaV3_6G008050
Synteny	CsaV3_6G008050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGACCAAAACAACAACAACAACAACAAGCATCACCCATTACTTCCTTCTCCTGCAACTTCTTCATCTCCATTAACAACACCTCCATTACCTACAACTTCTTCAGATATCAAAGACTTCACTCTCATTATTTCAAACAAAGATCAAAACAACAGCAACAGCAACAACAACATCAACAACAAGCAATTGGCTCCTAAACGTACCTCTAATAAAGACCGTCATAAAAAAGTCGATGGCCGTGGTCGTAGAATCCGTATGCCTGCTCTTTGTGCTGCTCGTGTCTTTCAATTAACTCGTGAATTGGGTCATAAAACTGATGGGGAGACCATTCAATGGCTTCTTCAACAAGCTGAGCCTTCTATTATTGCTGCCACTGGCTCCGGTACTATCCCCGCTTCTGCTCTTCATGCTGTTGGTGTTTCCCTTTCCGATCATGATTCCTCTGTTTCCGTCTCTGCTTCTTTAACCCCTAAAATCGAAGCGGTTCCCAGGACCAATTGGGCGATGATGGGTGCTAATTTGAGTAGATCTCATATGGCCTCCCAGGGGTTTTGGCCCTCTTTAGGTGGGATTGGGACTGGATTTGTTAGTGAGAATCCGGGGTCGATTATGCCCAAGTTTGGGTTTCATGGGTTTGAACTTCAGGGGATGAATTTGGGATCCGTGAATTTCCCGGCCATGATTGGGAATCAACATCAACAAATACCTGGGTTGGAGTTGGGGCTTTCGCAGGATGGGAATAATTTGAGAGGGATGTTGAATCCGCCTTCGTTTTCGCAAATTTATCATCAAATTGGCCAAAATCGTGATTCCTCTGCACAGCCATTGGAGCAGGATCAAGCTCCTGAGAAAGATGATTCTCAAGAATCGAGATGA

mRNA sequence

ATGGCAGACCAAAACAACAACAACAACAACAAGCATCACCCATTACTTCCTTCTCCTGCAACTTCTTCATCTCCATTAACAACACCTCCATTACCTACAACTTCTTCAGATATCAAAGACTTCACTCTCATTATTTCAAACAAAGATCAAAACAACAGCAACAGCAACAACAACATCAACAACAAGCAATTGGCTCCTAAACGTACCTCTAATAAAGACCGTCATAAAAAAGTCGATGGCCGTGGTCGTAGAATCCGTATGCCTGCTCTTTGTGCTGCTCGTGTCTTTCAATTAACTCGTGAATTGGGTCATAAAACTGATGGGGAGACCATTCAATGGCTTCTTCAACAAGCTGAGCCTTCTATTATTGCTGCCACTGGCTCCGGTACTATCCCCGCTTCTGCTCTTCATGCTGTTGGTGTTTCCCTTTCCGATCATGATTCCTCTGTTTCCGTCTCTGCTTCTTTAACCCCTAAAATCGAAGCGGTTCCCAGGACCAATTGGGCGATGATGGGTGCTAATTTGAGTAGATCTCATATGGCCTCCCAGGGGTTTTGGCCCTCTTTAGGTGGGATTGGGACTGGATTTGTTAGTGAGAATCCGGGGTCGATTATGCCCAAGTTTGGGTTTCATGGGTTTGAACTTCAGGGGATGAATTTGGGATCCGTGAATTTCCCGGCCATGATTGGGAATCAACATCAACAAATACCTGGGTTGGAGTTGGGGCTTTCGCAGGATGGGAATAATTTGAGAGGGATGTTGAATCCGCCTTCGTTTTCGCAAATTTATCATCAAATTGGCCAAAATCGTGATTCCTCTGCACAGCCATTGGAGCAGGATCAAGCTCCTGAGAAAGATGATTCTCAAGAATCGAGATGA

Coding sequence (CDS)

ATGGCAGACCAAAACAACAACAACAACAACAAGCATCACCCATTACTTCCTTCTCCTGCAACTTCTTCATCTCCATTAACAACACCTCCATTACCTACAACTTCTTCAGATATCAAAGACTTCACTCTCATTATTTCAAACAAAGATCAAAACAACAGCAACAGCAACAACAACATCAACAACAAGCAATTGGCTCCTAAACGTACCTCTAATAAAGACCGTCATAAAAAAGTCGATGGCCGTGGTCGTAGAATCCGTATGCCTGCTCTTTGTGCTGCTCGTGTCTTTCAATTAACTCGTGAATTGGGTCATAAAACTGATGGGGAGACCATTCAATGGCTTCTTCAACAAGCTGAGCCTTCTATTATTGCTGCCACTGGCTCCGGTACTATCCCCGCTTCTGCTCTTCATGCTGTTGGTGTTTCCCTTTCCGATCATGATTCCTCTGTTTCCGTCTCTGCTTCTTTAACCCCTAAAATCGAAGCGGTTCCCAGGACCAATTGGGCGATGATGGGTGCTAATTTGAGTAGATCTCATATGGCCTCCCAGGGGTTTTGGCCCTCTTTAGGTGGGATTGGGACTGGATTTGTTAGTGAGAATCCGGGGTCGATTATGCCCAAGTTTGGGTTTCATGGGTTTGAACTTCAGGGGATGAATTTGGGATCCGTGAATTTCCCGGCCATGATTGGGAATCAACATCAACAAATACCTGGGTTGGAGTTGGGGCTTTCGCAGGATGGGAATAATTTGAGAGGGATGTTGAATCCGCCTTCGTTTTCGCAAATTTATCATCAAATTGGCCAAAATCGTGATTCCTCTGCACAGCCATTGGAGCAGGATCAAGCTCCTGAGAAAGATGATTCTCAAGAATCGAGATGA

Protein sequence

MADQNNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNINNKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHMASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLELGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR*

Homology

[Close]

BLAST of CsaV3_6G008050 vs. NCBI nr
Match: XP_011656799.1 (transcription factor TCP20 [Cucumis sativus] >XP_031743603.1 transcription factor TCP20 [Cucumis sativus] >KGN46444.1 hypothetical protein Csa_005032 [Cucumis sativus])

HSP 1 Score: 567.0 bits (1460), Expect = 9.4e-158
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0


Query: 1   MADQNNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNIN 60
           MADQNNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNIN
Sbjct: 1   MADQNNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNIN 60

Query: 61  NKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP 120
           NKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP
Sbjct: 61  NKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP 120

Query: 121 SIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHM 180
           SIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHM
Sbjct: 121 SIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHM 180

Query: 181 ASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLE 240
           ASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLE
Sbjct: 181 ASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLE 240

Query: 241 LGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR 293
           LGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR
Sbjct: 241 LGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR 292

[Close]

BLAST of CsaV3_6G008050 vs. NCBI nr
Match: XP_008459878.1 (PREDICTED: transcription factor TCP20-like [Cucumis melo] >XP_016902500.1 PREDICTED: transcription factor TCP20-like [Cucumis melo] >KAA0039830.1 transcription factor TCP20-like [Cucumis melo var. makuwa] >TYK24669.1 transcription factor TCP20-like [Cucumis melo var. makuwa])

HSP 1 Score: 543.1 bits (1398), Expect = 1.5e-150
Identity = 282/294 (95.92%), Postives = 285/294 (96.94%), Query Frame = 0


Query: 1   MADQ--NNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNN 60
           MADQ  NNNNNNKHHPLLPSPATSSSPLTTPPLPT SSDIKDFTLIISNKDQNNSNSN+N
Sbjct: 1   MADQNNNNNNNNKHHPLLPSPATSSSPLTTPPLPTPSSDIKDFTLIISNKDQNNSNSNSN 60

Query: 61  INNKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQA 120
            NNKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQA
Sbjct: 61  NNNKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQA 120

Query: 121 EPSIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRS 180
           EPSIIAATGSGTIPASALHA GVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRS
Sbjct: 121 EPSIIAATGSGTIPASALHAAGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRS 180

Query: 181 HMASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPG 240
           HMA+ GFWPSLGGIGTGFVSENPGSIMPKFGFHGFE QGMNLGSVNFP MIGNQHQQIPG
Sbjct: 181 HMATPGFWPSLGGIGTGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPGMIGNQHQQIPG 240

Query: 241 LELGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR 293
           LELGLSQDGNNLRGMLNPPSFSQIYHQIGQNR+SSA PLEQDQAPEKDDSQESR
Sbjct: 241 LELGLSQDGNNLRGMLNPPSFSQIYHQIGQNRESSAPPLEQDQAPEKDDSQESR 294

[Close]

BLAST of CsaV3_6G008050 vs. NCBI nr
Match: XP_038876191.1 (transcription factor TCP20-like [Benincasa hispida])

HSP 1 Score: 474.6 bits (1220), Expect = 6.4e-130
Identity = 249/292 (85.27%), Postives = 264/292 (90.41%), Query Frame = 0


Query: 1   MADQNNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNIN 60
           MAD NNNNNN + P +   A SS+P+      T SSDIKDF++IISNKDQNN+      N
Sbjct: 1   MADHNNNNNNNNKPSV--AAASSTPI------TPSSDIKDFSIIISNKDQNNN------N 60

Query: 61  NKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP 120
           NKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP
Sbjct: 61  NKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP 120

Query: 121 SIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHM 180
           SIIAATGSGTIPASALHA GVSLSDHDSSVSVSA+LTPKI+AVPR NWAMMG NL+RSHM
Sbjct: 121 SIIAATGSGTIPASALHAAGVSLSDHDSSVSVSATLTPKIDAVPRPNWAMMGTNLNRSHM 180

Query: 181 ASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLE 240
           A+ GFWPSLGGIGTGFVSENPGSIMPKFGFHGFE QGMNLGSVNFP +IGNQHQQIPGLE
Sbjct: 181 ATTGFWPSLGGIGTGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQHQQIPGLE 240

Query: 241 LGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR 293
           LGLSQDGNNLRGMLNPPS+SQIYHQIGQNRDSSA PL+Q+QAPEKDDSQESR
Sbjct: 241 LGLSQDGNNLRGMLNPPSYSQIYHQIGQNRDSSAPPLQQEQAPEKDDSQESR 278

[Close]

BLAST of CsaV3_6G008050 vs. NCBI nr
Match: XP_022954371.1 (transcription factor TCP20-like [Cucurbita moschata])

HSP 1 Score: 422.5 bits (1085), Expect = 2.9e-114
Identity = 229/294 (77.89%), Postives = 247/294 (84.01%), Query Frame = 0


Query: 1   MADQNNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNIN 60
           +AD   +NN K  P   +P   SSP  TPP    SSDI    +   NKDQN        +
Sbjct: 63  LADMAEHNNKKPSPAAAAPPPPSSPAPTPP----SSDI---IIANPNKDQNKK------H 122

Query: 61  NKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP 120
            +QLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP
Sbjct: 123 QQQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP 182

Query: 121 SIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHM 180
           SIIAATGSGTIPASALHA GVSLSD D+SVSVSA+LTPKI+AVPR NWAMMGANL+RSHM
Sbjct: 183 SIIAATGSGTIPASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHM 242

Query: 181 ASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQ--HQQIPG 240
            + GFWPSLGGIG GFVSENPGSIMPKFGFHGFE QGMNLGSVNFP +IGNQ   QQIPG
Sbjct: 243 GTPGFWPSLGGIGPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPG 302

Query: 241 LELGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR 293
           LELGLSQ+GNN+RGMLNPPS+SQIYHQIGQ+RD SA PLEQDQAP+KD+SQESR
Sbjct: 303 LELGLSQEGNNVRGMLNPPSYSQIYHQIGQSRDPSAAPLEQDQAPDKDNSQESR 343

[Close]

BLAST of CsaV3_6G008050 vs. NCBI nr
Match: XP_023513595.1 (transcription factor TCP20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 416.0 bits (1068), Expect = 2.7e-112
Identity = 219/284 (77.11%), Postives = 247/284 (86.97%), Query Frame = 0


Query: 11  KHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNINNKQLAPKRTS 70
           +H+   PSP  S+    TPP P  S+DIKDF++II++KD+N        +++QLAPKRTS
Sbjct: 3   EHNNKKPSPPASTPTTITPPPPPPSADIKDFSIIIASKDENK-------HHQQLAPKRTS 62

Query: 71  NKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGT 130
           NKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGT
Sbjct: 63  NKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGT 122

Query: 131 IPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHMASQGFWPSLG 190
           IPASALHA GVS+SD ++  S+SA+LTPK++ V R NWAMMGANL+RSHMA+ GFWPSLG
Sbjct: 123 IPASALHAAGVSVSDQET--SISAALTPKLDGVARPNWAMMGANLNRSHMATAGFWPSLG 182

Query: 191 GIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQ-IPGLELGLSQDGNN 250
           GIGTGFVSEN GSIMPKFGFHGFE QGMNLGS+NFP +IGNQHQQ +PGLELGLSQ+GNN
Sbjct: 183 GIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGLSQEGNN 242

Query: 251 LRGMLNPPSFSQIYHQIGQNRDSS-AQPLEQDQAPEKDDSQESR 293
           LRGMLNPPS+SQIYHQI QNRDSS    LEQDQAPEKDDS++SR
Sbjct: 243 LRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQSR 277

[Close]

BLAST of CsaV3_6G008050 vs. ExPASy Swiss-Prot
Match: Q9LSD5 (Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 4.1e-55
Identity = 142/283 (50.18%), Postives = 183/283 (64.66%), Query Frame = 0


Query: 32  PTTSSDIKDFTLIISNKDQNNSNSNNNINNKQLAPKRTSNKDRHKKVDGRGRRIRMPALC 91
           PTT  +IKDF +++S  D+  +  + N N  QL PKR+SNKDRH KV+GRGRRIRMPALC
Sbjct: 43  PTT--EIKDFQIVVSASDKEPNKKSQNQN--QLGPKRSSNKDRHTKVEGRGRRIRMPALC 102

Query: 92  AARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAVGVSLSDHDSSVS 151
           AAR+FQLTRELGHK+DGETIQWLLQQAEPSIIAATGSGTIPASAL A   + S+H    S
Sbjct: 103 AARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASAL-ASSAATSNHHQGGS 162

Query: 152 VSASLT-------PKIEAVPRTNWAMMGA-NLSRSHMASQGFWPSLGGIG-----TGFVS 211
           ++A L            +    NW + G   +SRS + + G WP++ G G     TG +S
Sbjct: 163 LTAGLMISHDLDGGSSSSGRPLNWGIGGGEGVSRSSLPT-GLWPNVAGFGSGVPTTGLMS 222

Query: 212 ENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLELGLSQDGNNLRGMLNPPS 271
           E  G    + GF GF+  G  +G ++F +++G  H Q+PGLELGLSQ+GN   G+LNP S
Sbjct: 223 EGAGY---RIGFPGFDFPG--VGHMSFASILGGNHNQMPGLELGLSQEGN--VGVLNPQS 282

Query: 272 FSQIYHQIGQNRDSSAQPL----------EQDQAPEKDDSQES 292
           F+QIY Q+GQ +  +   +           Q ++ EKDDSQ S
Sbjct: 283 FTQIYQQMGQAQAQAQGRVLHHMHHNHEEHQQESGEKDDSQGS 312

[Close]

BLAST of CsaV3_6G008050 vs. ExPASy Swiss-Prot
Match: Q93Z00 (Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.3e-28
Identity = 65/86 (75.58%), Postives = 75/86 (87.21%), Query Frame = 0


Query: 67  KRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAAT 126
           KR S KDRH KVDGRGRRIRMPALCAARVFQLTRELGHK+DGETI+WLLQQAEPS+IAAT
Sbjct: 113 KRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAAT 172

Query: 127 GSGTIPASALHAVGVSLSDHDSSVSV 153
           G+GTIPA+   ++ +SL    SS+S+
Sbjct: 173 GTGTIPAN-FTSLNISLRSSGSSMSL 197

[Close]

BLAST of CsaV3_6G008050 vs. ExPASy Swiss-Prot
Match: Q9C9L2 (Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.1e-27
Identity = 76/145 (52.41%), Postives = 95/145 (65.52%), Query Frame = 0


Query: 9   NNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNINNKQLAPKR 68
           ++ H P  P     SS         TSS      +I       ++ S  N   K+  PKR
Sbjct: 6   DHNHRPNFPLQLLDSS---------TSSSSTSLAII-------STTSEPNSEPKKPPPKR 65

Query: 69  TSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGS 128
           TS KDRH KV+GRGRRIRMPA+CAARVFQLTRELGHK+DGETI+WLLQQAEP++IAATG+
Sbjct: 66  TSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGT 125

Query: 129 GTIPASALHAVGVSLSDHDSSVSVS 154
           GTIPA+   ++ +SL    SS+S +
Sbjct: 126 GTIPAN-FTSLNISLRSSRSSLSAA 133

[Close]

BLAST of CsaV3_6G008050 vs. ExPASy Swiss-Prot
Match: Q53PH2 (Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.2e-25
Identity = 63/87 (72.41%), Postives = 71/87 (81.61%), Query Frame = 0


Query: 65  APKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIA 124
           A  +   KDRH KV+GRGRRIRMPALCAARVFQLTRELGHKTDGETI+WLLQQAEP+I+A
Sbjct: 146 AGAKRPTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAIVA 205

Query: 125 ATGSGTIPA--SALHAVGVSLSDHDSS 150
           ATG+GTIPA  S+L     S + H SS
Sbjct: 206 ATGTGTIPANFSSLAVSLRSAASHSSS 232

[Close]

BLAST of CsaV3_6G008050 vs. ExPASy Swiss-Prot
Match: Q9LT89 (Transcription factor TCP19 OS=Arabidopsis thaliana OX=3702 GN=TCP19 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.5e-25
Identity = 74/167 (44.31%), Postives = 97/167 (58.08%), Query Frame = 0


Query: 65  APKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIA 124
           APKR ++KDRH KV+GRGRRIRMPA CAARVFQLTRELGHK+DGETI+WLL++AEP+II 
Sbjct: 51  APKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAIIE 110

Query: 125 ATGSGTIPASALHAVGV-----------------------------SLSDH-DSSVSVSA 184
           ATG+GT+PA A+   G                                SD  D + S  +
Sbjct: 111 ATGTGTVPAIAVSVNGTLKIPTSSPVLNDGGRDGDGDLIKKRRKRNCTSDFVDVNDSCHS 170

Query: 185 SLTPKIEAVPRTNWAMMGANLSRSHMASQGFWPSLGGIGTGFVSENP 202
           S+T  +  +  +N+ +   N++        FWP   G+GT FV+  P
Sbjct: 171 SVTSGLAPITASNYGVNILNVNTQGFVP--FWPM--GMGTAFVTGGP 213

[Close]

BLAST of CsaV3_6G008050 vs. ExPASy TrEMBL
Match: A0A0A0KC88 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G093640 PE=4 SV=1)

HSP 1 Score: 567.0 bits (1460), Expect = 4.6e-158
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 0


Query: 1   MADQNNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNIN 60
           MADQNNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNIN
Sbjct: 1   MADQNNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNIN 60

Query: 61  NKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP 120
           NKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP
Sbjct: 61  NKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP 120

Query: 121 SIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHM 180
           SIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHM
Sbjct: 121 SIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHM 180

Query: 181 ASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLE 240
           ASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLE
Sbjct: 181 ASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLE 240

Query: 241 LGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR 293
           LGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR
Sbjct: 241 LGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR 292

[Close]

BLAST of CsaV3_6G008050 vs. ExPASy TrEMBL
Match: A0A1S3CAQ4 (transcription factor TCP20-like OS=Cucumis melo OX=3656 GN=LOC103498864 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 7.1e-151
Identity = 282/294 (95.92%), Postives = 285/294 (96.94%), Query Frame = 0


Query: 1   MADQ--NNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNN 60
           MADQ  NNNNNNKHHPLLPSPATSSSPLTTPPLPT SSDIKDFTLIISNKDQNNSNSN+N
Sbjct: 1   MADQNNNNNNNNKHHPLLPSPATSSSPLTTPPLPTPSSDIKDFTLIISNKDQNNSNSNSN 60

Query: 61  INNKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQA 120
            NNKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQA
Sbjct: 61  NNNKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQA 120

Query: 121 EPSIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRS 180
           EPSIIAATGSGTIPASALHA GVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRS
Sbjct: 121 EPSIIAATGSGTIPASALHAAGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRS 180

Query: 181 HMASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPG 240
           HMA+ GFWPSLGGIGTGFVSENPGSIMPKFGFHGFE QGMNLGSVNFP MIGNQHQQIPG
Sbjct: 181 HMATPGFWPSLGGIGTGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPGMIGNQHQQIPG 240

Query: 241 LELGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR 293
           LELGLSQDGNNLRGMLNPPSFSQIYHQIGQNR+SSA PLEQDQAPEKDDSQESR
Sbjct: 241 LELGLSQDGNNLRGMLNPPSFSQIYHQIGQNRESSAPPLEQDQAPEKDDSQESR 294

[Close]

BLAST of CsaV3_6G008050 vs. ExPASy TrEMBL
Match: A0A5A7T992 (Transcription factor TCP20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002190 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 7.1e-151
Identity = 282/294 (95.92%), Postives = 285/294 (96.94%), Query Frame = 0


Query: 1   MADQ--NNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNN 60
           MADQ  NNNNNNKHHPLLPSPATSSSPLTTPPLPT SSDIKDFTLIISNKDQNNSNSN+N
Sbjct: 1   MADQNNNNNNNNKHHPLLPSPATSSSPLTTPPLPTPSSDIKDFTLIISNKDQNNSNSNSN 60

Query: 61  INNKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQA 120
            NNKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQA
Sbjct: 61  NNNKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQA 120

Query: 121 EPSIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRS 180
           EPSIIAATGSGTIPASALHA GVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRS
Sbjct: 121 EPSIIAATGSGTIPASALHAAGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRS 180

Query: 181 HMASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPG 240
           HMA+ GFWPSLGGIGTGFVSENPGSIMPKFGFHGFE QGMNLGSVNFP MIGNQHQQIPG
Sbjct: 181 HMATPGFWPSLGGIGTGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPGMIGNQHQQIPG 240

Query: 241 LELGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR 293
           LELGLSQDGNNLRGMLNPPSFSQIYHQIGQNR+SSA PLEQDQAPEKDDSQESR
Sbjct: 241 LELGLSQDGNNLRGMLNPPSFSQIYHQIGQNRESSAPPLEQDQAPEKDDSQESR 294

[Close]

BLAST of CsaV3_6G008050 vs. ExPASy TrEMBL
Match: A0A6J1GQQ8 (transcription factor TCP20-like OS=Cucurbita moschata OX=3662 GN=LOC111456629 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.4e-114
Identity = 229/294 (77.89%), Postives = 247/294 (84.01%), Query Frame = 0


Query: 1   MADQNNNNNNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNIN 60
           +AD   +NN K  P   +P   SSP  TPP    SSDI    +   NKDQN        +
Sbjct: 63  LADMAEHNNKKPSPAAAAPPPPSSPAPTPP----SSDI---IIANPNKDQNKK------H 122

Query: 61  NKQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP 120
            +QLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP
Sbjct: 123 QQQLAPKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEP 182

Query: 121 SIIAATGSGTIPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHM 180
           SIIAATGSGTIPASALHA GVSLSD D+SVSVSA+LTPKI+AVPR NWAMMGANL+RSHM
Sbjct: 183 SIIAATGSGTIPASALHAAGVSLSDPDTSVSVSATLTPKIDAVPRLNWAMMGANLNRSHM 242

Query: 181 ASQGFWPSLGGIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQ--HQQIPG 240
            + GFWPSLGGIG GFVSENPGSIMPKFGFHGFE QGMNLGSVNFP +IGNQ   QQIPG
Sbjct: 243 GTPGFWPSLGGIGPGFVSENPGSIMPKFGFHGFEFQGMNLGSVNFPTIIGNQQPQQQIPG 302

Query: 241 LELGLSQDGNNLRGMLNPPSFSQIYHQIGQNRDSSAQPLEQDQAPEKDDSQESR 293
           LELGLSQ+GNN+RGMLNPPS+SQIYHQIGQ+RD SA PLEQDQAP+KD+SQESR
Sbjct: 303 LELGLSQEGNNVRGMLNPPSYSQIYHQIGQSRDPSAAPLEQDQAPDKDNSQESR 343

[Close]

BLAST of CsaV3_6G008050 vs. ExPASy TrEMBL
Match: A0A6J1H7H8 (transcription factor TCP20-like OS=Cucurbita moschata OX=3662 GN=LOC111460886 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.4e-111
Identity = 219/284 (77.11%), Postives = 246/284 (86.62%), Query Frame = 0


Query: 11  KHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNINNKQLAPKRTS 70
           +H+   PSP  S+    TPP P  S+DIKDF +II++KD+N        +++QLAPKRTS
Sbjct: 3   EHNKKKPSPPASTPTTITPP-PPPSADIKDFNIIIASKDENK-------HHQQLAPKRTS 62

Query: 71  NKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGT 130
           NKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGT
Sbjct: 63  NKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGT 122

Query: 131 IPASALHAVGVSLSDHDSSVSVSASLTPKIEAVPRTNWAMMGANLSRSHMASQGFWPSLG 190
           IPASALHA GVS+SD ++  S+SA+LTPK++ V R NWAMMGANL+RSHMA+ GFWPSLG
Sbjct: 123 IPASALHAAGVSVSDQET--SISAALTPKLDGVARPNWAMMGANLNRSHMATAGFWPSLG 182

Query: 191 GIGTGFVSENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQ-IPGLELGLSQDGNN 250
           GIGTGFVSEN GSIMPKFGFHGFE QGMNLGS+NFP +IGNQHQQ +PGLELGLSQ+GNN
Sbjct: 183 GIGTGFVSENSGSIMPKFGFHGFEFQGMNLGSMNFPTIIGNQHQQHVPGLELGLSQEGNN 242

Query: 251 LRGMLNPPSFSQIYHQIGQNRDSS-AQPLEQDQAPEKDDSQESR 293
           LRGMLNPPS+SQIYHQI QNRDSS    LEQDQAPEKDDS++SR
Sbjct: 243 LRGMLNPPSYSQIYHQIEQNRDSSGGGSLEQDQAPEKDDSEQSR 276

[Close]

BLAST of CsaV3_6G008050 vs. TAIR 10
Match: AT3G27010.1 (TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 )

HSP 1 Score: 216.5 bits (550), Expect = 2.9e-56
Identity = 142/283 (50.18%), Postives = 183/283 (64.66%), Query Frame = 0


Query: 32  PTTSSDIKDFTLIISNKDQNNSNSNNNINNKQLAPKRTSNKDRHKKVDGRGRRIRMPALC 91
           PTT  +IKDF +++S  D+  +  + N N  QL PKR+SNKDRH KV+GRGRRIRMPALC
Sbjct: 43  PTT--EIKDFQIVVSASDKEPNKKSQNQN--QLGPKRSSNKDRHTKVEGRGRRIRMPALC 102

Query: 92  AARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAVGVSLSDHDSSVS 151
           AAR+FQLTRELGHK+DGETIQWLLQQAEPSIIAATGSGTIPASAL A   + S+H    S
Sbjct: 103 AARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASAL-ASSAATSNHHQGGS 162

Query: 152 VSASLT-------PKIEAVPRTNWAMMGA-NLSRSHMASQGFWPSLGGIG-----TGFVS 211
           ++A L            +    NW + G   +SRS + + G WP++ G G     TG +S
Sbjct: 163 LTAGLMISHDLDGGSSSSGRPLNWGIGGGEGVSRSSLPT-GLWPNVAGFGSGVPTTGLMS 222

Query: 212 ENPGSIMPKFGFHGFELQGMNLGSVNFPAMIGNQHQQIPGLELGLSQDGNNLRGMLNPPS 271
           E  G    + GF GF+  G  +G ++F +++G  H Q+PGLELGLSQ+GN   G+LNP S
Sbjct: 223 EGAGY---RIGFPGFDFPG--VGHMSFASILGGNHNQMPGLELGLSQEGN--VGVLNPQS 282

Query: 272 FSQIYHQIGQNRDSSAQPL----------EQDQAPEKDDSQES 292
           F+QIY Q+GQ +  +   +           Q ++ EKDDSQ S
Sbjct: 283 FTQIYQQMGQAQAQAQGRVLHHMHHNHEEHQQESGEKDDSQGS 312

[Close]

BLAST of CsaV3_6G008050 vs. TAIR 10
Match: AT3G47620.1 (TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 )

HSP 1 Score: 126.7 bits (317), Expect = 3.0e-29
Identity = 65/86 (75.58%), Postives = 75/86 (87.21%), Query Frame = 0


Query: 67  KRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAAT 126
           KR S KDRH KVDGRGRRIRMPALCAARVFQLTRELGHK+DGETI+WLLQQAEPS+IAAT
Sbjct: 113 KRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAAT 172

Query: 127 GSGTIPASALHAVGVSLSDHDSSVSV 153
           G+GTIPA+   ++ +SL    SS+S+
Sbjct: 173 GTGTIPAN-FTSLNISLRSSGSSMSL 197

[Close]

BLAST of CsaV3_6G008050 vs. TAIR 10
Match: AT1G69690.1 (TCP family transcription factor )

HSP 1 Score: 122.5 bits (306), Expect = 5.7e-28
Identity = 76/145 (52.41%), Postives = 95/145 (65.52%), Query Frame = 0


Query: 9   NNKHHPLLPSPATSSSPLTTPPLPTTSSDIKDFTLIISNKDQNNSNSNNNINNKQLAPKR 68
           ++ H P  P     SS         TSS      +I       ++ S  N   K+  PKR
Sbjct: 6   DHNHRPNFPLQLLDSS---------TSSSSTSLAII-------STTSEPNSEPKKPPPKR 65

Query: 69  TSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGS 128
           TS KDRH KV+GRGRRIRMPA+CAARVFQLTRELGHK+DGETI+WLLQQAEP++IAATG+
Sbjct: 66  TSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGT 125

Query: 129 GTIPASALHAVGVSLSDHDSSVSVS 154
           GTIPA+   ++ +SL    SS+S +
Sbjct: 126 GTIPAN-FTSLNISLRSSRSSLSAA 133

[Close]

BLAST of CsaV3_6G008050 vs. TAIR 10
Match: AT5G51910.1 (TCP family transcription factor )

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-26
Identity = 74/167 (44.31%), Postives = 97/167 (58.08%), Query Frame = 0


Query: 65  APKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIA 124
           APKR ++KDRH KV+GRGRRIRMPA CAARVFQLTRELGHK+DGETI+WLL++AEP+II 
Sbjct: 51  APKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAIIE 110

Query: 125 ATGSGTIPASALHAVGV-----------------------------SLSDH-DSSVSVSA 184
           ATG+GT+PA A+   G                                SD  D + S  +
Sbjct: 111 ATGTGTVPAIAVSVNGTLKIPTSSPVLNDGGRDGDGDLIKKRRKRNCTSDFVDVNDSCHS 170

Query: 185 SLTPKIEAVPRTNWAMMGANLSRSHMASQGFWPSLGGIGTGFVSENP 202
           S+T  +  +  +N+ +   N++        FWP   G+GT FV+  P
Sbjct: 171 SVTSGLAPITASNYGVNILNVNTQGFVP--FWPM--GMGTAFVTGGP 213

[Close]

BLAST of CsaV3_6G008050 vs. TAIR 10
Match: AT5G51910.2 (TCP family transcription factor )

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-26
Identity = 74/167 (44.31%), Postives = 97/167 (58.08%), Query Frame = 0


Query: 65  APKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIA 124
           APKR ++KDRH KV+GRGRRIRMPA CAARVFQLTRELGHK+DGETI+WLL++AEP+II 
Sbjct: 51  APKRPTSKDRHTKVEGRGRRIRMPAGCAARVFQLTRELGHKSDGETIRWLLERAEPAIIE 110

Query: 125 ATGSGTIPASALHAVGV-----------------------------SLSDH-DSSVSVSA 184
           ATG+GT+PA A+   G                                SD  D + S  +
Sbjct: 111 ATGTGTVPAIAVSVNGTLKIPTSSPVLNDGGRDGDGDLIKKRRKRNCTSDFVDVNDSCHS 170

Query: 185 SLTPKIEAVPRTNWAMMGANLSRSHMASQGFWPSLGGIGTGFVSENP 202
           S+T  +  +  +N+ +   N++        FWP   G+GT FV+  P
Sbjct: 171 SVTSGLAPITASNYGVNILNVNTQGFVP--FWPM--GMGTAFVTGGP 213

The following BLAST results are available for this feature:

BLAST of CsaV3_6G008050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656799.1	9.4e-158	100.00	transcription factor TCP20 [Cucumis sativus] >XP_031743603.1 transcription facto...	[more]
XP_008459878.1	1.5e-150	95.92	PREDICTED: transcription factor TCP20-like [Cucumis melo] >XP_016902500.1 PREDIC...	[more]
XP_038876191.1	6.4e-130	85.27	transcription factor TCP20-like [Benincasa hispida]	[more]
XP_022954371.1	2.9e-114	77.89	transcription factor TCP20-like [Cucurbita moschata]	[more]
XP_023513595.1	2.7e-112	77.11	transcription factor TCP20-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_6G008050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSD5	4.1e-55	50.18	Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1	[more]
Q93Z00	4.3e-28	75.58	Transcription factor TCP14 OS=Arabidopsis thaliana OX=3702 GN=TCP14 PE=1 SV=1	[more]
Q9C9L2	8.1e-27	52.41	Transcription factor TCP15 OS=Arabidopsis thaliana OX=3702 GN=TCP15 PE=1 SV=1	[more]
Q53PH2	1.2e-25	72.41	Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 ...	[more]
Q9LT89	1.5e-25	44.31	Transcription factor TCP19 OS=Arabidopsis thaliana OX=3702 GN=TCP19 PE=1 SV=1	[more]

BLAST of CsaV3_6G008050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KC88	4.6e-158	100.00	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G093640 PE=4 SV...	[more]
A0A1S3CAQ4	7.1e-151	95.92	transcription factor TCP20-like OS=Cucumis melo OX=3656 GN=LOC103498864 PE=4 SV=...	[more]
A0A5A7T992	7.1e-151	95.92	Transcription factor TCP20-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A6J1GQQ8	1.4e-114	77.89	transcription factor TCP20-like OS=Cucurbita moschata OX=3662 GN=LOC111456629 PE...	[more]
A0A6J1H7H8	1.4e-111	77.11	transcription factor TCP20-like OS=Cucurbita moschata OX=3662 GN=LOC111460886 PE...	[more]

BLAST of CsaV3_6G008050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G27010.1	2.9e-56	50.18	TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20	[more]
AT3G47620.1	3.0e-29	75.58	TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14	[more]
AT1G69690.1	5.7e-28	52.41	TCP family transcription factor	[more]
AT5G51910.1	1.1e-26	44.31	TCP family transcription factor	[more]
AT5G51910.2	1.1e-26	44.31	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 69..165 e-value: 7.0E-31 score: 107.9
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 71..125 score: 27.380758
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..83
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 267..292
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..66
None	No IPR available	PANTHER	PTHR31072:SF121	TRANSCRIPTION FACTOR TCP20-LIKE	coord: 35..292
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 35..292

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G008050.1	CsaV3_6G008050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003700	DNA-binding transcription factor activity