CsaV3_6G006530 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G006530
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
Location	chr6: 5430724 .. 5433564 (+)
RNA-Seq Expression	CsaV3_6G006530
Synteny	CsaV3_6G006530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGACAGAGGGCCTGAGAAAAATGGCGGCAAGGCAGAAAGCGGTGGCGACACTGCTTAATCTAATTAGAACCCTTAAAAACGATCGCCGGAAGCCTGGTTTCAGCCAGCCTCTGCCGTCGTTGAGACGTGCCTTTTCACTTTTACGATCAGATCAATCTCATCGACAATGTCCCTGAAGATCAGCTTCGTTTTCAACGGTACTGCCCTAACTTCTCCTTTTTGTCTTTTGCATCGATTTCTTTCCTCAATTTTATATCTTTGACTCTTTTATGCGGGGATTTAAGGTATACTGAGACGGGGTTCACTGTGAATGGAGTGGATTATGAGGGCAGCTTGCTTTGTGTTGGGAATTTGTTGATGTCTTGGACTCCTAAGAAATTTTCGGAAATTACGTCTGATAGGTTTGCTTTGCATTTCTTGTTCCTAACTTACAATACTCGATTTACTTCTTTTGTTCTTTTTGGTGATTGAAATGTTTTTTTTTTTTTTGCAGCTTATCTATCTTCCAGATTGTGCGCCCTATTACAGGTAAAATCTGTTGTTGTGTTCGGAAAATGTGTTGAATTATTGGTCATTGTTGAAGTAGTTTTAATACGAGTGTCTAAAGATACCTAGATTTGACGTTTCTATTGAAATGTGTTTATTACTAAAGGACGTCTGTGATTTTCCTTGGCAATTGGTGCCCAAATGTTATATGGTAAGTTGTATTGTCCTGTCAGATTATTGAGGTGAAGTGCAAGCTGGCCCGCGACTGTGGACGAGTAAGGTTCTTGGACTAGTTTTTCTGTGCTTGAGCATGAGCAAGACTTTAACTTTATCATTCCTTTCCTTCTTTCAATACTGTAACATGTGGGGTAAGATTTTCACGTCTGCCTTAGACGAGGATATCTTGTGAGATAGTGCAGGTTTGTGGCCTAATTGTTCCTTTGAAGTATCCCACAATACAACCATGCCTTAGTTTTGCTGTTTAATAATTAGATTTTTGATAATTTGACTCGTGTACCTAGTTAAAAATGTAGACGGATCTGAAGCTTTTAAACAGGAAGATGATGAGGATTTTTTTTTCTTCACTCTTTCTCGTTTTTTTCTTCCTTCTTTCTCTTTCGGCTGATAAGCAAGTCTACCCTCCATATATTTTGATTATGCTAGAAGAGGGAAGAGGACCAAATGAGATATTTACATCAGCTAGCTAATGTTGTAAGGGACGTGTAATATGTTGTAGAGGAGATGGGAGAATGAATCTAGAATTCGCAAATTTGTTATTGAGAAAGGGAGGAATAACATAATTAGAGTGGACTCGTAATATTTATCAATTAAAAGCTTCTTGAATATGTGAAAGATTTGCACTTTTCAGCCATTGAATGAATTACCCAAGACCTAAACTCTTGTTTCTTTATTCTTTCTCTGATTCTGAGATGAGGATGTCAAGTGTACGTTTCTGTTAACAAGGTTTATGGTTTTCTTTCTTAGGCATTCTTCTAGAATCTGACATGAGAGATTACTTCCATTTAAAGTTGAATGCATAAGCTAGCCTGTAAACCAAATATTCTGTTTATTTTCGAGCTCTGCCGTCATCATCTTAGTGCCGTGTATTGTTCATATTTGCTCTTTGCTAGCACATTTTTGTTGATTTCTACTGTCAACTGATTAATTTTCTTAATTTTAATTTTTTTTAAATCTTTCTTATTGTCAGAAATTCTAATACTTGGCTGTGGGAGATATACTGAACCAGTAAATCCTGAATTGAGGCAGTTCATTCGTTCCACTGGCATGAAGTTGGAAGCTGTAGACACGGTACTTTTGGTTTGAAATTATGTTGTTTGTCGAATTTGTCTTGATCCATAAGATAATTACTTTTCATGCATCTGAAAATCAAGATTTTGAGCTATCTTATGGATCTGTGACTATTGGTGGGAAACAGTATATTCTTTGTTTAGGATAAGAAAATAGGTGGGAAAACATCCACCAACCATAATAGCCTCGTCAAAAGAGATTGTAGTGGGTTACTGTATTGTCTAGTTTGTGATAAGATAAATTAACGTGTCATCAATTCACCAGTAACATCCTCTTTTCCTTACAATCCCTTGATCAGATGGGTATTAAAGACTTTTTAGTGTAGGATATTAAAAACCACATGTTTCTTCATCAATAAAAAGAAAAGAAAAAAAAACTAACCCACATGATGTAGTGGAAATAGGATCTGAATTATAGGTGATATTTGAGAATGATGTTAAGTTCAACTGTTCAAGAACTATCTTTAGAGCCATATGTCAACTTTTGCTTAAGAAAGAAACAAGTGGGTTGTTGTTGAGTAAATTACCAATTACAATGATCAACCGGGGACTTGCTAGTTTAAACAGTGGGCTGTTTGGAATCTCGAATGGTCTCATTTTGTCTAAATTTAACTAGTTTTTGACACGATGGATAATTTGTTACTGTAGATCAAGTAGTTATCTGCACTCTCTCTTTCTCTCAAGGCAAATCATCCATGTCCAGCAATTCTCTTCATATCCTATGTATTTCCGTACACTACAAACCTAATCGATATTTGATATTTGAAAAATGAGGGTACTTCAGATATAGGGCAGAATTATGCACTCTACTTGGGAAGAGGGCTGTCTCTTCTTGTACAACTACTTTTCACTTAACCTTTAACCTCAGACCTTGGGGGGTTGAGAGTACATGTATAGACCAGTTGACCTATGTTCGAGTTGGCATGTTTATCCTTAACAAAGCTTTGTTATTTGCAGAGAAATGCGGCATCAACTTATAATATCCTAAATGAGGAGGGTAGAATTGTAGCTGCAGCGCTTCTGCCTTATGGAGTTTCTTCATGA

mRNA sequence

ATGGGGACAGAGGGCCTGAGAAAAATGGCGGCAAGGCAGAAAGCGATCAATCTCATCGACAATGTCCCTGAAGATCAGCTTCGTTTTCAACGGTATACTGAGACGGGGTTCACTGTGAATGGAGTGGATTATGAGGGCAGCTTGCTTTGTGTTGGGAATTTGTTGATGTCTTGGACTCCTAAGAAATTTTCGGAAATTACGTCTGATAGCTTATCTATCTTCCAGATTGTGCGCCCTATTACAGAAATTCTAATACTTGGCTGTGGGAGATATACTGAACCAGTAAATCCTGAATTGAGGCAGTTCATTCGTTCCACTGGCATGAAGTTGGAAGCTGTAGACACGAGAAATGCGGCATCAACTTATAATATCCTAAATGAGGAGGGTAGAATTGTAGCTGCAGCGCTTCTGCCTTATGGAGTTTCTTCATGA

Coding sequence (CDS)

ATGGGGACAGAGGGCCTGAGAAAAATGGCGGCAAGGCAGAAAGCGATCAATCTCATCGACAATGTCCCTGAAGATCAGCTTCGTTTTCAACGGTATACTGAGACGGGGTTCACTGTGAATGGAGTGGATTATGAGGGCAGCTTGCTTTGTGTTGGGAATTTGTTGATGTCTTGGACTCCTAAGAAATTTTCGGAAATTACGTCTGATAGCTTATCTATCTTCCAGATTGTGCGCCCTATTACAGAAATTCTAATACTTGGCTGTGGGAGATATACTGAACCAGTAAATCCTGAATTGAGGCAGTTCATTCGTTCCACTGGCATGAAGTTGGAAGCTGTAGACACGAGAAATGCGGCATCAACTTATAATATCCTAAATGAGGAGGGTAGAATTGTAGCTGCAGCGCTTCTGCCTTATGGAGTTTCTTCATGA

Protein sequence

MGTEGLRKMAARQKAINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDSLSIFQIVRPITEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS*

Homology

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BLAST of CsaV3_6G006530 vs. NCBI nr
Match: KAE8646709.1 (hypothetical protein Csa_005308 [Cucumis sativus])

HSP 1 Score: 288.1 bits (736), Expect = 4.2e-74
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MGTEGLRKMAARQKAINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTP 60
           MGTEGLRKMAARQKAINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTP
Sbjct: 1   MGTEGLRKMAARQKAINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTP 60

Query: 61  KKFSEITSDSLSIFQIVRPITEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAAS 120
           KKFSEITSDSLSIFQIVRPITEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAAS
Sbjct: 61  KKFSEITSDSLSIFQIVRPITEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAAS 120

Query: 121 TYNILNEEGRIVAAALLPYGVSS 144
           TYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 TYNILNEEGRIVAAALLPYGVSS 143

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BLAST of CsaV3_6G006530 vs. NCBI nr
Match: XP_031743290.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis sativus])

HSP 1 Score: 259.2 bits (661), Expect = 2.1e-65
Identity = 129/138 (93.48%), Postives = 131/138 (94.93%), Query Frame = 0


Query: 6   LRKMAARQKAINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSE 65
           LR+  +    INLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSE
Sbjct: 34  LRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSE 93

Query: 66  ITSDSLSIFQIVRPITEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNIL 125
           ITSDSLSIFQIVRPI EILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNIL
Sbjct: 94  ITSDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNIL 153

Query: 126 NEEGRIVAAALLPYGVSS 144
           NEEGRIVAAALLPYGVSS
Sbjct: 154 NEEGRIVAAALLPYGVSS 171

[Close]

BLAST of CsaV3_6G006530 vs. NCBI nr
Match: XP_031742645.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis sativus] >XP_031743421.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis sativus])

HSP 1 Score: 257.7 bits (657), Expect = 6.0e-65
Identity = 128/138 (92.75%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 6   LRKMAARQKAINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSE 65
           LR+  +    INLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSE
Sbjct: 34  LRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSE 93

Query: 66  ITSDSLSIFQIVRPITEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNIL 125
           ITSDSLSIFQIVRPI EILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNA STYNIL
Sbjct: 94  ITSDSLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNATSTYNIL 153

Query: 126 NEEGRIVAAALLPYGVSS 144
           NEEGRIVAAALLPYGVSS
Sbjct: 154 NEEGRIVAAALLPYGVSS 171

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BLAST of CsaV3_6G006530 vs. NCBI nr
Match: XP_031745505.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis sativus] >XP_031745506.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis sativus])

HSP 1 Score: 256.1 bits (653), Expect = 1.8e-64
Identity = 127/138 (92.03%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 6   LRKMAARQKAINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSE 65
           LR+  +    INLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSE
Sbjct: 34  LRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSE 93

Query: 66  ITSDSLSIFQIVRPITEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNIL 125
           ITSDSLSIFQIVRPI EILILGCGRYT+PVNPELRQFIRSTGMKLEAVDTRNA STYNIL
Sbjct: 94  ITSDSLSIFQIVRPIPEILILGCGRYTKPVNPELRQFIRSTGMKLEAVDTRNATSTYNIL 153

Query: 126 NEEGRIVAAALLPYGVSS 144
           NEEGRIVAAALLPYGVSS
Sbjct: 154 NEEGRIVAAALLPYGVSS 171

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BLAST of CsaV3_6G006530 vs. NCBI nr
Match: XP_038906819.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Benincasa hispida])

HSP 1 Score: 254.2 bits (648), Expect = 6.7e-64
Identity = 126/138 (91.30%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 6   LRKMAARQKAINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSE 65
           LR+  +    INLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSW+PKKFSE
Sbjct: 34  LRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSE 93

Query: 66  ITSDSLSIFQIVRPITEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNIL 125
           IT +SLSIFQIVRPI EILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNIL
Sbjct: 94  ITPESLSIFQIVRPIPEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNIL 153

Query: 126 NEEGRIVAAALLPYGVSS 144
           NEEGRIVAAALLPYGVSS
Sbjct: 154 NEEGRIVAAALLPYGVSS 171

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BLAST of CsaV3_6G006530 vs. ExPASy Swiss-Prot
Match: O08776 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Rattus norvegicus OX=10116 GN=Ndufaf3 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.1e-16
Identity = 42/123 (34.15%), Postives = 67/123 (54.47%), Query Frame = 0


Query: 16  INLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDSLSIFQ 75
           I+L+ N     +    Y   GFT+NG    G    +   ++ W      +IT +S SIF 
Sbjct: 48  ISLLQNEFPQAVYIDSYNSRGFTINGNRVFGPCALLPQTVVQWNVGSHQDITEESFSIFW 107

Query: 76  IVRPITEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAA 135
           ++ P  EI+++G G  TE ++ ++ Q +R  G+ +E  DT NA +T+N L  EGR+  AA
Sbjct: 108 MLEPRIEIVVVGTGNKTERLHSQVLQAMRQRGIAVEIQDTPNACATFNFLCHEGRVTGAA 167

Query: 136 LLP 139
           L+P
Sbjct: 168 LIP 170

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BLAST of CsaV3_6G006530 vs. ExPASy Swiss-Prot
Match: Q6DFN1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Xenopus tropicalis OX=8364 GN=ndufaf3 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.1e-16
Identity = 39/109 (35.78%), Postives = 63/109 (57.80%), Query Frame = 0


Query: 30  QRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDSLSIFQIVRPITEILILGCG 89
           + Y+  GF +NG    G    +   ++ W    + +I  +SLS+F ++ P  EIL++G G
Sbjct: 66  ETYSSQGFIINGDKVVGPCAVIPKAILQWNVGSYKDINLESLSLFHMLSPRIEILVVGTG 125

Query: 90  RYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLP 139
              E ++P + +F+R  G+ +E  DT NA +T+N L  E RI AAAL+P
Sbjct: 126 DRVERLDPNILKFMRQKGVAVEVQDTANACATFNFLVSERRITAAALIP 174

[Close]

BLAST of CsaV3_6G006530 vs. ExPASy Swiss-Prot
Match: Q9JKL4 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Mus musculus OX=10090 GN=Ndufaf3 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 9.2e-16
Identity = 40/123 (32.52%), Postives = 69/123 (56.10%), Query Frame = 0


Query: 16  INLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDSLSIFQ 75
           I+L+ +     +    Y+  GFT+ G    G  + +   ++ W      +IT +S S+F 
Sbjct: 48  ISLLQSEFPQAVYIDSYSSRGFTICGNRVFGPCVLLPQTVVQWNVGSHQDITEESFSLFW 107

Query: 76  IVRPITEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAA 135
           ++ P  EI+++G G  TE ++P++ Q +R  G+ +E  DT NA +T+N L  EGR+  AA
Sbjct: 108 MLEPRIEIVVVGTGNKTERLHPQVLQAMRQRGIAVEVQDTPNACATFNFLCHEGRVTGAA 167

Query: 136 LLP 139
           L+P
Sbjct: 168 LIP 170

[Close]

BLAST of CsaV3_6G006530 vs. ExPASy Swiss-Prot
Match: Q9BU61 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Homo sapiens OX=9606 GN=NDUFAF3 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.0e-15
Identity = 40/123 (32.52%), Postives = 65/123 (52.85%), Query Frame = 0


Query: 16  INLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDSLSIFQ 75
           I+L+       +    Y   GF +NG    G    + + ++ W      +IT DS S+F 
Sbjct: 47  ISLLQREAAQAMYIDSYNSRGFMINGNRVLGPCALLPHSVVQWNVGSHQDITEDSFSLFW 106

Query: 76  IVRPITEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAA 135
           ++ P  EI+++G G  TE +  ++ Q +R  G+ +E  DT NA +T+N L  EGR+  AA
Sbjct: 107 LLEPRIEIVVVGTGDRTERLQSQVLQAMRQRGIAVEVQDTPNACATFNFLCHEGRVTGAA 166

Query: 136 LLP 139
           L+P
Sbjct: 167 LIP 169

[Close]

BLAST of CsaV3_6G006530 vs. ExPASy Swiss-Prot
Match: Q2HJI2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Bos taurus OX=9913 GN=NDUFAF3 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.7e-15
Identity = 40/123 (32.52%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 16  INLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSEITSDSLSIFQ 75
           I+L+       +    Y+  GF VNG    G    +   ++ W    + +IT +S S+F 
Sbjct: 47  ISLLQRESPLAMYIDSYSSRGFVVNGNRVFGPCALLPQSVVQWNVGSYQDITEESFSLFW 106

Query: 76  IVRPITEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAA 135
           ++ P  EI+++G G  TE + P + + +R  G+ +E  DT NA +T+N L  EGR+  AA
Sbjct: 107 MLEPRIEIVVVGTGDRTERLQPHVLRAMRQRGIAVEVQDTPNACATFNFLCHEGRVTGAA 166

Query: 136 LLP 139
           L+P
Sbjct: 167 LIP 169

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BLAST of CsaV3_6G006530 vs. ExPASy TrEMBL
Match: A0A5A7TES8 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002470 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.2e-64
Identity = 125/138 (90.58%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 6   LRKMAARQKAINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSE 65
           LR+  +    INLIDNVP+DQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSW+PKKFSE
Sbjct: 34  LRRAFSLYDQINLIDNVPKDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSE 93

Query: 66  ITSDSLSIFQIVRPITEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNIL 125
           IT DSLSIFQIVRPI EIL+LGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNIL
Sbjct: 94  ITPDSLSIFQIVRPIPEILVLGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNIL 153

Query: 126 NEEGRIVAAALLPYGVSS 144
           NEEGRIVAAALLPYGVSS
Sbjct: 154 NEEGRIVAAALLPYGVSS 171

[Close]

BLAST of CsaV3_6G006530 vs. ExPASy TrEMBL
Match: A0A1S3CB84 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis melo OX=3656 GN=LOC103498992 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.2e-64
Identity = 125/138 (90.58%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 6   LRKMAARQKAINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSE 65
           LR+  +    INLIDNVP+DQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSW+PKKFSE
Sbjct: 34  LRRAFSLYDQINLIDNVPKDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSE 93

Query: 66  ITSDSLSIFQIVRPITEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNIL 125
           IT DSLSIFQIVRPI EIL+LGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNIL
Sbjct: 94  ITPDSLSIFQIVRPIPEILVLGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNIL 153

Query: 126 NEEGRIVAAALLPYGVSS 144
           NEEGRIVAAALLPYGVSS
Sbjct: 154 NEEGRIVAAALLPYGVSS 171

[Close]

BLAST of CsaV3_6G006530 vs. ExPASy TrEMBL
Match: A0A6J1HIQ3 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbita moschata OX=3662 GN=LOC111464400 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.7e-62
Identity = 120/138 (86.96%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 6   LRKMAARQKAINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSE 65
           LR+  +    INLIDNVPEDQLRFQRYTETGFTVNG+DYEGSLLCVGNLLMSW+PKKFSE
Sbjct: 34  LRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSE 93

Query: 66  ITSDSLSIFQIVRPITEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNIL 125
           IT +SLSIFQI+RPI EIL+LGCGRY EPVNP+LRQFIRSTGMKLEAVD+RNAASTYNIL
Sbjct: 94  ITPESLSIFQIMRPIPEILVLGCGRYIEPVNPQLRQFIRSTGMKLEAVDSRNAASTYNIL 153

Query: 126 NEEGRIVAAALLPYGVSS 144
           NEEGRIVAAALLPYGVSS
Sbjct: 154 NEEGRIVAAALLPYGVSS 171

[Close]

BLAST of CsaV3_6G006530 vs. ExPASy TrEMBL
Match: A0A6J1KD25 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbita maxima OX=3661 GN=LOC111494507 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.7e-60
Identity = 118/138 (85.51%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 6   LRKMAARQKAINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSE 65
           LR+  +    INLIDNVPEDQLRFQ YTETGFTVNG+DYEGSLLCVG+LLMSW+PKKFSE
Sbjct: 34  LRRAFSLYDQINLIDNVPEDQLRFQWYTETGFTVNGLDYEGSLLCVGDLLMSWSPKKFSE 93

Query: 66  ITSDSLSIFQIVRPITEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNIL 125
           IT +SLSIFQI+RPI EIL+LGCGRY EPVNPELRQFIRSTGMKLEAVD+RNA STYNIL
Sbjct: 94  ITPESLSIFQIIRPIPEILVLGCGRYIEPVNPELRQFIRSTGMKLEAVDSRNATSTYNIL 153

Query: 126 NEEGRIVAAALLPYGVSS 144
           NEEGRIVAAALLPYGVSS
Sbjct: 154 NEEGRIVAAALLPYGVSS 171

[Close]

BLAST of CsaV3_6G006530 vs. ExPASy TrEMBL
Match: V4VZ28 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Citrus clementina OX=85681 GN=CICLE_v10022551mg PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.7e-60
Identity = 117/138 (84.78%), Postives = 126/138 (91.30%), Query Frame = 0


Query: 6   LRKMAARQKAINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSE 65
           LR+  +    INLIDNVPEDQLRFQ YT+TGFTVNGV YEGSLLC+GNLL+SWTPKKFSE
Sbjct: 34  LRRAFSLYDQINLIDNVPEDQLRFQGYTDTGFTVNGVQYEGSLLCIGNLLLSWTPKKFSE 93

Query: 66  ITSDSLSIFQIVRPITEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNIL 125
           IT + LSIFQ+VRPI EILILGCGRY EPVNPELRQFIRSTGMKLEA+D+RNAASTYNIL
Sbjct: 94  ITPNCLSIFQLVRPIPEILILGCGRYIEPVNPELRQFIRSTGMKLEAIDSRNAASTYNIL 153

Query: 126 NEEGRIVAAALLPYGVSS 144
           NEEGRIVAAALLPYGVSS
Sbjct: 154 NEEGRIVAAALLPYGVSS 171

[Close]

BLAST of CsaV3_6G006530 vs. TAIR 10
Match: AT3G60150.1 (Protein of unknown function (DUF498/DUF598) )

HSP 1 Score: 221.5 bits (563), Expect = 4.5e-58
Identity = 105/138 (76.09%), Postives = 121/138 (87.68%), Query Frame = 0


Query: 6   LRKMAARQKAINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSE 65
           LR+  +    INLIDNVPEDQLRFQ + ET FTVNGV YEGSLLCVGNLLMSW+P+ FS+
Sbjct: 33  LRRAFSLYDQINLIDNVPEDQLRFQEFDETSFTVNGVKYEGSLLCVGNLLMSWSPRYFSD 92

Query: 66  ITSDSLSIFQIVRPITEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNIL 125
           IT+DSLSIFQ VRPI E+LI+GCGRY  P+NP++RQF++S GMKLE VD+RNAASTYNIL
Sbjct: 93  ITTDSLSIFQTVRPIPELLIVGCGRYNHPLNPQVRQFVKSIGMKLETVDSRNAASTYNIL 152

Query: 126 NEEGRIVAAALLPYGVSS 144
           NEEGRIVAAALLPYGV+S
Sbjct: 153 NEEGRIVAAALLPYGVTS 170

[Close]

BLAST of CsaV3_6G006530 vs. TAIR 10
Match: AT2G44525.1 (Protein of unknown function (DUF498/DUF598) )

HSP 1 Score: 219.9 bits (559), Expect = 1.3e-57
Identity = 105/138 (76.09%), Postives = 120/138 (86.96%), Query Frame = 0


Query: 6   LRKMAARQKAINLIDNVPEDQLRFQRYTETGFTVNGVDYEGSLLCVGNLLMSWTPKKFSE 65
           LR+  +    INLIDNVPEDQLRFQ + +T FTVNGV YEGSLLCVGNLLMSW+P+KFSE
Sbjct: 33  LRRAFSLYDQINLIDNVPEDQLRFQEFNDTSFTVNGVKYEGSLLCVGNLLMSWSPRKFSE 92

Query: 66  ITSDSLSIFQIVRPITEILILGCGRYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNIL 125
           IT+DSLSIFQ VRPI E+LI+GCGR   PV PE+RQF++S GMKLE VD+RNAASTYNIL
Sbjct: 93  ITTDSLSIFQTVRPIPELLIVGCGRDIHPVTPEVRQFVKSLGMKLETVDSRNAASTYNIL 152

Query: 126 NEEGRIVAAALLPYGVSS 144
           NEEGR+VAAALLPYGV+S
Sbjct: 153 NEEGRVVAAALLPYGVTS 170

The following BLAST results are available for this feature:

BLAST of CsaV3_6G006530 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646709.1	4.2e-74	100.00	hypothetical protein Csa_005308 [Cucumis sativus]	[more]
XP_031743290.1	2.1e-65	93.48	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucum...	[more]
XP_031742645.1	6.0e-65	92.75	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucum...	[more]
XP_031745505.1	1.8e-64	92.03	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucum...	[more]
XP_038906819.1	6.7e-64	91.30	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Benin...	[more]

BLAST of CsaV3_6G006530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O08776	3.1e-16	34.15	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Rattus n...	[more]
Q6DFN1	3.1e-16	35.78	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Xenopus ...	[more]
Q9JKL4	9.2e-16	32.52	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Mus musc...	[more]
Q9BU61	2.0e-15	32.52	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Homo sap...	[more]
Q2HJI2	2.7e-15	32.52	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Bos taur...	[more]

BLAST of CsaV3_6G006530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TES8	4.2e-64	90.58	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis ...	[more]
A0A1S3CB84	4.2e-64	90.58	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis ...	[more]
A0A6J1HIQ3	6.7e-62	86.96	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbit...	[more]
A0A6J1KD25	1.7e-60	85.51	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbit...	[more]
V4VZ28	3.7e-60	84.78	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Citrus c...	[more]

BLAST of CsaV3_6G006530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G60150.1	4.5e-58	76.09	Protein of unknown function (DUF498/DUF598)	[more]
AT2G44525.1	1.3e-57	76.09	Protein of unknown function (DUF498/DUF598)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007523	NDUFAF3/Mth938 domain-containing protein	PFAM	PF04430	DUF498	coord: 30..137 e-value: 1.6E-31 score: 108.6
IPR007523	NDUFAF3/Mth938 domain-containing protein	PANTHER	PTHR21192	NUCLEAR PROTEIN E3-3	coord: 6..143
IPR036748	MTH938-like superfamily	GENE3D	3.40.1230.10		coord: 12..139 e-value: 5.0E-34 score: 118.6
IPR036748	MTH938-like superfamily	SUPERFAMILY	64076	MTH938-like	coord: 16..139
None	No IPR available	PANTHER	PTHR21192:SF4	BNAC04G03830D PROTEIN	coord: 6..143
IPR034095	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3	CDD	cd05125	Mth938_2P1-like	coord: 32..140 e-value: 5.82772E-45 score: 140.798

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G006530.1	CsaV3_6G006530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032981	mitochondrial respiratory chain complex I assembly