CsaV3_6G005680 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G005680
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	classical arabinogalactan protein 25
Location	chr6: 4871726 .. 4874759 (+)
RNA-Seq Expression	CsaV3_6G005680
Synteny	CsaV3_6G005680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTGTTAAAAGGAAAAGAAAATCTCAATCCTGCGAATCCATACATTAAAGTCCAATGGGCTTACTATGTTAATAGGAATGATATTAGAGGAATATTAAGGCCGTGTTAGTAATTGGTTAGTAGTTTATTTGGGAAGTTTGGTTATAAATACAATGAGTAGGGATGGGAAAGATAGACAACATTTTGGTGAGTGAATTAGTGCTTAGAGAATGCTTTCAAGAATGAGAGGGTCCAACTACCTTGAACACTTGTTTATCTTGTTTTTCGTTACCTTTTATATTTCACTACATTCGAGTTCTATCACACGTCTAAACAATATTTGACACTAGCGAAACAACAGATGGAATGTTTAAAGTGAAACCAAAACGTTTAATGGATATTCACATTGGATGGTTTTGCTAGAGTCCAATCGAGAGGCAACATACAGTGGATCTAATCTTGACTCCTGGTCGTGATATTGCCAAATAGAGAAGTTTTCCAGCTAAATGCTGTATGAACTATGAAGAAGCACACTGAGACCATAACCATCAAAGAACTTTAGTGAATATAAGGATCCGACGAGAGAGGGCTTATGGCCCCAAAATATCATAAATCCGAATCAAATAGTTGAAGAGTCTAGAAAGTTATATACCTCTAGAGATCAAATCTCCAGACCAAGGAAAGTTTAAACTACCAAGATCCTCAAGCCTAAGCTGGCCATTAAGCAATGTTAGGCTTATAAATTGTTTAAAACCAGAAACAGACAGCACAAAAGAAAAGGAAATTTAGAGAACCAATAATCATTTTTTGGAGTCTAAATTTAAATCATAGATGGATTTCTGAACGTTAGAAACCAAGGGATGCCCCTCATGACATCATATAGGAAAACTTTCGGAGATGTATAATTTATTCTCTCTATCTAGAAGGTAGGAAGAAGTATAATTACTCGCGAGTCTTAATGTAGTTGCAAAGGATTTCTATTTTGTGATGTTCTTCCCTGTTTGATTATGTGCAGGCTTTTTCTTTGCTTATGACTAGGAGCGTAACCTTGTAGTTTGTAGCATATAATATTTGTCATGAGTGGAACTTATAGTAAGGAAAACCACGATGAGTACATATTGGTCTCTCCCTTTTTTGCCCCTTAATAGAGCCTTGAAATTACTTTTCTTTGGTGTCTTAAGATTTTATATAAAAGGTCGTGGAATCACGCCGTTGGAGACTAATTCATGTTCCTTTGATGGTGCTCTCGAGAAACAGCAATATTAATAGAACAGATTAGATCCATTAACAAAATTTGAGCTCTAACTCGTTGAAAGAGTATCAAGCCCACATGGACAAAGCATTCTACCTACTTTCAATCTTTTTTACATCTTTCCTTCTTTCTATTCAAATACTTTAAATTTGTTATTTAGTACTTCGAACTTTAGAGAAGTGTGCTATATAAACTCTCTCATTTACCTAATTTTACTAGCGCTTTTCGTTTTGTAGTCTAAATTTTTTTTAATAACAAACAATTAATGAACCACATAATACCTTCATACAAAGGGCTTGCCACTGGATCCCATCCAAAGTTTGACTCATTGAGTTCTACAAAGTCAAAACCATGAATTCCGTCCCAATGTTGAAGATTATGCTCGATGCCCAAATGCCAGCCAACTTCTTGGCACTTCCAATTTCTCATCACCGAACATTTTATCGGTTTCAATTTGGTATAACTTTGAGTATCTCTGCACGATCCTTCCATGTCCCCCTTTCACTTTAGCGGAGCCCTTTTCAAATTAAACAGTCTTTATTTGTGTTCTTCCCCATTATCTCCTGATTCCACTCAACAAGTTTGAGACGTAGGATTAATAATTAAAATCCGAGTAATTAGAGTAGAGAGGGCGTAGTTACGAGAGTGATTAGTGAAACCGTAATTTGGTAAAGTTGTTATCAATTGGACTGGACTCTAGGATCTGAATTATCGTAAATTATGGAGAACAAATATCACGGGTTATAAAAGGAATCGTCAACTACCAAACAAGCCGTAGCAAAAAAGTCCAATCTTTTGTCCATCCCCAAACATTACAACCTGTATCCACTCCAAATCATCCACTCACCATCAGCCACGTGGAAGTTGTCTTACCTGGCTTCTCCATTCTCCCATTTCAAAGGTCCCACGTCATAATTTCAACAAAAGTCACCAAAGCCATCTCCCCGGCAGCGTAGTGAAGCCAAGGGTTATTATTATTATTATTTTTTTAATCTTTTTAATAACACAATAAAATAATAATAACAACAACAACAATAGCTCTCCTTGGATTTTCACAAATATATTAGGCTACACACCCTCCAGTGATTTCATCATCATTAGAATGGCCTCCTTTTGGTATTGTTCAGCAGTCATTATGGTTTTCATGGCCTCACCATTGCTTGCTTTACCATCTGTACCCAATCCAAAACCCAGCTCGCCTTTTCAAGAACTCTCCCCTGAAATTGCTCCATTATTGCCTTCTACTGGTGATAAGATTCCCTCTGCAACTGGTTCTTCTATTCCCACCATTCCTTCCAACCCCAGCCCTCCAAATCCAGATGACTTCGAAGCTCTTGGCCCTGATTCCTCTGCCCTTTCGCCATTTGGCCTCCCAGGTTCCTTTGCACCTCCTAATTCCTTGCCTTGCTATTCAAATTGGCTTCTTCTTCTTCTCAATGGCTTAGCACTACTTACCTTCTCTATGCACTTACATTGATTCTGGAAACATCTTTCTGCATAAAGGAGTTCCAATTCTACTTGTACTTGATTCATCACATCCCAGAATGTCCCCCCCCCCCCCCCCCCCCCCCCTTTTTTTTCTTCTTCTTCTGTTAATTTCATTTTTCTTAGTCTATGGAAAATGGTACTTTTAGTTTAGCTTCTTTCCCTTCATCCATTGCTGGGGAAATTCAGATCATATTTGTACTATAAAGCATATATAGAATAGCGTTTTTCAGTCTTTGATTTTTTATTTCCTGCTTGGTTTCCTCTTTGTTAATATTTAGGCTGGTTCGGTTTGATTTTTTTTTTTTTTTTTTTTT

mRNA sequence

ATGGCCTCCTTTTGGTATTGTTCAGCAGTCATTATGGTTTTCATGGCCTCACCATTGCTTGCTTTACCATCTGTACCCAATCCAAAACCCAGCTCGCCTTTTCAAGAACTCTCCCCTGAAATTGCTCCATTATTGCCTTCTACTGGTGATAAGATTCCCTCTGCAACTGGTTCTTCTATTCCCACCATTCCTTCCAACCCCAGCCCTCCAAATCCAGATGACTTCGAAGCTCTTGGCCCTGATTCCTCTGCCCTTTCGCCATTTGGCCTCCCAGGTTCCTTTGCACCTCCTAATTCCTTGCCTTGCTATTCAAATTGGCTTCTTCTTCTTCTCAATGGCTTAGCACTACTTACCTTCTCTATGCACTTACATTGA

Coding sequence (CDS)

ATGGCCTCCTTTTGGTATTGTTCAGCAGTCATTATGGTTTTCATGGCCTCACCATTGCTTGCTTTACCATCTGTACCCAATCCAAAACCCAGCTCGCCTTTTCAAGAACTCTCCCCTGAAATTGCTCCATTATTGCCTTCTACTGGTGATAAGATTCCCTCTGCAACTGGTTCTTCTATTCCCACCATTCCTTCCAACCCCAGCCCTCCAAATCCAGATGACTTCGAAGCTCTTGGCCCTGATTCCTCTGCCCTTTCGCCATTTGGCCTCCCAGGTTCCTTTGCACCTCCTAATTCCTTGCCTTGCTATTCAAATTGGCTTCTTCTTCTTCTCAATGGCTTAGCACTACTTACCTTCTCTATGCACTTACATTGA

Protein sequence

MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSIPTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALLTFSMHLH*

Homology

[Close]

BLAST of CsaV3_6G005680 vs. NCBI nr
Match: XP_011656664.1 (classical arabinogalactan protein 25 [Cucumis sativus] >KGN46189.1 hypothetical protein Csa_005749 [Cucumis sativus])

HSP 1 Score: 245.7 bits (626), Expect = 2.1e-61
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSI 60
           MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSI
Sbjct: 1   MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSI 60

Query: 61  PTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALLTFS 120
           PTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALLTFS
Sbjct: 61  PTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALLTFS 120

Query: 121 MHLH 125
           MHLH
Sbjct: 121 MHLH 124

[Close]

BLAST of CsaV3_6G005680 vs. NCBI nr
Match: XP_008458497.1 (PREDICTED: classical arabinogalactan protein 25 [Cucumis melo] >KAA0033458.1 classical arabinogalactan protein 25 [Cucumis melo var. makuwa])

HSP 1 Score: 243.8 bits (621), Expect = 7.8e-61
Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSI 60
           MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSI
Sbjct: 1   MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSI 60

Query: 61  PTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALLTFS 120
           PTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALL FS
Sbjct: 61  PTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALLAFS 120

Query: 121 MHLH 125
           MHLH
Sbjct: 121 MHLH 124

[Close]

BLAST of CsaV3_6G005680 vs. NCBI nr
Match: XP_023547783.1 (classical arabinogalactan protein 25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 178.7 bits (452), Expect = 3.1e-41
Identity = 98/124 (79.03%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 1   MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSI 60
           MASFWYC+AVIM FMASPLLALPS+PNPK SS FQELSP+IAPLLPS+G  IPSA+G SI
Sbjct: 1   MASFWYCAAVIMAFMASPLLALPSLPNPKLSSSFQELSPDIAPLLPSSGGSIPSASG-SI 60

Query: 61  PTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALLTFS 120
           PTIPSNPSPPNPD+FEA GPDSSALSPFGLPGSFA P  LP YSN  LLLL  L+L  F 
Sbjct: 61  PTIPSNPSPPNPDEFEAPGPDSSALSPFGLPGSFAAPKPLPPYSN-SLLLLTALSLHAFY 120

Query: 121 MHLH 125
           +HLH
Sbjct: 121 LHLH 122

[Close]

BLAST of CsaV3_6G005680 vs. NCBI nr
Match: KAG6575045.1 (hypothetical protein SDJN03_25684, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013621.1 hypothetical protein SDJN02_23788, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 178.3 bits (451), Expect = 4.0e-41
Identity = 98/124 (79.03%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 1   MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSI 60
           MASFWYC+AVIM FMASPLLALPS+PNPK SS FQELSP+IAPLLPS+G  IPSA+G SI
Sbjct: 1   MASFWYCAAVIMAFMASPLLALPSLPNPKLSSSFQELSPDIAPLLPSSGGSIPSASG-SI 60

Query: 61  PTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALLTFS 120
           PTIPSNPSPPNPD+FEA GPDSSALSP GLPGSFA P SLP YSN  LLLL  L+L  F 
Sbjct: 61  PTIPSNPSPPNPDEFEAPGPDSSALSPLGLPGSFAAPKSLPPYSN-SLLLLTALSLHAFY 120

Query: 121 MHLH 125
           +HLH
Sbjct: 121 LHLH 122

[Close]

BLAST of CsaV3_6G005680 vs. NCBI nr
Match: XP_023006472.1 (classical arabinogalactan protein 25-like [Cucurbita maxima])

HSP 1 Score: 178.3 bits (451), Expect = 4.0e-41
Identity = 98/124 (79.03%), Postives = 104/124 (83.87%), Query Frame = 0


Query: 1   MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSI 60
           MASFWYC+AVIM FMASPLLALPS+PNPK S  FQELSP+IAPLLPSTG  IPSATG SI
Sbjct: 1   MASFWYCAAVIMAFMASPLLALPSLPNPKLSPSFQELSPDIAPLLPSTGGNIPSATG-SI 60

Query: 61  PTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALLTFS 120
           PTIPSNPSPPNPD+FEA GPDSSALSPFGLPGSFA P  LP YSN   LLL  L+L  F 
Sbjct: 61  PTIPSNPSPPNPDEFEAPGPDSSALSPFGLPGSFAAPKPLPPYSN--SLLLTALSLHAFY 120

Query: 121 MHLH 125
           +HLH
Sbjct: 121 LHLH 121

[Close]

BLAST of CsaV3_6G005680 vs. ExPASy Swiss-Prot
Match: Q6NN00 (Classical arabinogalactan protein 25 OS=Arabidopsis thaliana OX=3702 GN=AGP25 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.5e-10
Identity = 48/112 (42.86%), Postives = 67/112 (59.82%), Query Frame = 0


Query: 3   SFWYCSAVIMVFMASPLLALPSVPNPKPS-SPFQELSPEIAPLLPSTGDKIPSATGSSIP 62
           +F + + ++++F    +    S+ +  P+ S  Q+LSPEIAPLLPS GD +PS  GS   
Sbjct: 2   AFSFLNKLLIIF----IFIFISLSSSSPTISLVQQLSPEIAPLLPSPGDALPSDDGSG-- 61

Query: 63  TIPSNPSPPNPDDFEALGPDSSALSPFGLP--GSFAPPNSLPCYSNWLLLLL 112
           TIPS+PSPP+PD  +   PD  A SPF  P   S +PP SLP     L+ L+
Sbjct: 62  TIPSSPSPPDPDTNDGSYPDPLAFSPFASPPVSSPSPPPSLPSAGVLLISLI 107

[Close]

BLAST of CsaV3_6G005680 vs. ExPASy TrEMBL
Match: A0A0A0KBF8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G067960 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 9.9e-62
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0


Query: 1   MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSI 60
           MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSI
Sbjct: 1   MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSI 60

Query: 61  PTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALLTFS 120
           PTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALLTFS
Sbjct: 61  PTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALLTFS 120

Query: 121 MHLH 125
           MHLH
Sbjct: 121 MHLH 124

[Close]

BLAST of CsaV3_6G005680 vs. ExPASy TrEMBL
Match: A0A5A7SSC0 (Classical arabinogalactan protein 25 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G001190 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.8e-61
Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSI 60
           MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSI
Sbjct: 1   MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSI 60

Query: 61  PTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALLTFS 120
           PTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALL FS
Sbjct: 61  PTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALLAFS 120

Query: 121 MHLH 125
           MHLH
Sbjct: 121 MHLH 124

[Close]

BLAST of CsaV3_6G005680 vs. ExPASy TrEMBL
Match: A0A1S3C8K2 (classical arabinogalactan protein 25 OS=Cucumis melo OX=3656 GN=LOC103497889 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.8e-61
Identity = 123/124 (99.19%), Postives = 123/124 (99.19%), Query Frame = 0


Query: 1   MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSI 60
           MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSI
Sbjct: 1   MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSI 60

Query: 61  PTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALLTFS 120
           PTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALL FS
Sbjct: 61  PTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALLAFS 120

Query: 121 MHLH 125
           MHLH
Sbjct: 121 MHLH 124

[Close]

BLAST of CsaV3_6G005680 vs. ExPASy TrEMBL
Match: A0A6J1KVY5 (classical arabinogalactan protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC111499190 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.9e-41
Identity = 98/124 (79.03%), Postives = 104/124 (83.87%), Query Frame = 0


Query: 1   MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSI 60
           MASFWYC+AVIM FMASPLLALPS+PNPK S  FQELSP+IAPLLPSTG  IPSATG SI
Sbjct: 1   MASFWYCAAVIMAFMASPLLALPSLPNPKLSPSFQELSPDIAPLLPSTGGNIPSATG-SI 60

Query: 61  PTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALLTFS 120
           PTIPSNPSPPNPD+FEA GPDSSALSPFGLPGSFA P  LP YSN   LLL  L+L  F 
Sbjct: 61  PTIPSNPSPPNPDEFEAPGPDSSALSPFGLPGSFAAPKPLPPYSN--SLLLTALSLHAFY 120

Query: 121 MHLH 125
           +HLH
Sbjct: 121 LHLH 121

[Close]

BLAST of CsaV3_6G005680 vs. ExPASy TrEMBL
Match: A0A6J1H4T0 (classical arabinogalactan protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111460056 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.7e-40
Identity = 96/124 (77.42%), Postives = 104/124 (83.87%), Query Frame = 0


Query: 1   MASFWYCSAVIMVFMASPLLALPSVPNPKPSSPFQELSPEIAPLLPSTGDKIPSATGSSI 60
           MASFWYC+AVIM  MASPLLALPS+PNPK SS FQELSP+IAPLLPS+G  IPSA+G SI
Sbjct: 1   MASFWYCAAVIMALMASPLLALPSLPNPKLSSSFQELSPDIAPLLPSSGGSIPSASG-SI 60

Query: 61  PTIPSNPSPPNPDDFEALGPDSSALSPFGLPGSFAPPNSLPCYSNWLLLLLNGLALLTFS 120
           PTIPSNPSPPNPD+FEA GPDSSALSP GLPGSFA P  LP YSN  LLLL  L+L  F 
Sbjct: 61  PTIPSNPSPPNPDEFEAPGPDSSALSPLGLPGSFAAPKPLPPYSN-SLLLLTALSLHAFY 120

Query: 121 MHLH 125
           +HLH
Sbjct: 121 LHLH 122

[Close]

BLAST of CsaV3_6G005680 vs. TAIR 10
Match: AT5G18690.1 (arabinogalactan protein 25 )

HSP 1 Score: 64.7 bits (156), Expect = 6.0e-11
Identity = 48/112 (42.86%), Postives = 67/112 (59.82%), Query Frame = 0


Query: 3   SFWYCSAVIMVFMASPLLALPSVPNPKPS-SPFQELSPEIAPLLPSTGDKIPSATGSSIP 62
           +F + + ++++F    +    S+ +  P+ S  Q+LSPEIAPLLPS GD +PS  GS   
Sbjct: 2   AFSFLNKLLIIF----IFIFISLSSSSPTISLVQQLSPEIAPLLPSPGDALPSDDGSG-- 61

Query: 63  TIPSNPSPPNPDDFEALGPDSSALSPFGLP--GSFAPPNSLPCYSNWLLLLL 112
           TIPS+PSPP+PD  +   PD  A SPF  P   S +PP SLP     L+ L+
Sbjct: 62  TIPSSPSPPDPDTNDGSYPDPLAFSPFASPPVSSPSPPPSLPSAGVLLISLI 107

The following BLAST results are available for this feature:

BLAST of CsaV3_6G005680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656664.1	2.1e-61	100.00	classical arabinogalactan protein 25 [Cucumis sativus] >KGN46189.1 hypothetical ...	[more]
XP_008458497.1	7.8e-61	99.19	PREDICTED: classical arabinogalactan protein 25 [Cucumis melo] >KAA0033458.1 cla...	[more]
XP_023547783.1	3.1e-41	79.03	classical arabinogalactan protein 25-like [Cucurbita pepo subsp. pepo]	[more]
KAG6575045.1	4.0e-41	79.03	hypothetical protein SDJN03_25684, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023006472.1	4.0e-41	79.03	classical arabinogalactan protein 25-like [Cucurbita maxima]	[more]

BLAST of CsaV3_6G005680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NN00	8.5e-10	42.86	Classical arabinogalactan protein 25 OS=Arabidopsis thaliana OX=3702 GN=AGP25 PE...	[more]

BLAST of CsaV3_6G005680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBF8	9.9e-62	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G067960 PE=4 SV=1	[more]
A0A5A7SSC0	3.8e-61	99.19	Classical arabinogalactan protein 25 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3C8K2	3.8e-61	99.19	classical arabinogalactan protein 25 OS=Cucumis melo OX=3656 GN=LOC103497889 PE=...	[more]
A0A6J1KVY5	1.9e-41	79.03	classical arabinogalactan protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1H4T0	3.7e-40	77.42	classical arabinogalactan protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of CsaV3_6G005680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G18690.1	6.0e-11	42.86	arabinogalactan protein 25	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..81
None	No IPR available	PANTHER	PTHR35725:SF3	CLASSICAL ARABINOGALACTAN PROTEIN 25	coord: 1..109
IPR039346	Classical arabinogalactan protein 25/26	PANTHER	PTHR35725	CLASSICAL ARABINOGALACTAN PROTEIN 26	coord: 1..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G005680.1	CsaV3_6G005680.1	mRNA