CsaV3_6G005250 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G005250
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 4436511 .. 4436817 (+)
RNA-Seq ExpressionCsaV3_6G005250
SyntenyCsaV3_6G005250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGATGATGAGGAGATGTTTGAGATTGAAATCAATATGAAAAGATATAGAGAATTGAGAGAAAGTAAGTGTAAAGAGGTTGAAAATCAAGGTCCAATTCGGTTGGCAATAGACATGCATGTTTATAAATTTGATGAGGCGCTATAGTGTTGACAGACGAAGACGCGCACCTTAATTTCGGAGCACCGGGGAGCCCAAAGGCAGCATCGTGGTGCTTGGACCTTTTTTTGAGGTAGTAGCTCTCTGCTTTACAGTAGCTCTATGTTTTAAGGCAGTAGCTCTTCACCTTATAGTGTCGCGCTAG

mRNA sequence

ATGTCAGATGATGAGGAGATGTTTGAGATTGAAATCAATATGAAAAGATATAGAGAATTGAGAGAAAGTAAGTGTAAAGAGGTTGAAAATCAAGGTCCAATTCGCACCGGGGAGCCCAAAGGCAGCATCGTGGTGCTTGGACCTTTTTTTGAGGTAGTAGCTCTCTGCTTTACAGTAGCTCTATGTTTTAAGGCAGTAGCTCTTCACCTTATAGTGTCGCGCTAG

Coding sequence (CDS)

ATGTCAGATGATGAGGAGATGTTTGAGATTGAAATCAATATGAAAAGATATAGAGAATTGAGAGAAAGTAAGTGTAAAGAGGTTGAAAATCAAGGTCCAATTCGCACCGGGGAGCCCAAAGGCAGCATCGTGGTGCTTGGACCTTTTTTTGAGGTAGTAGCTCTCTGCTTTACAGTAGCTCTATGTTTTAAGGCAGTAGCTCTTCACCTTATAGTGTCGCGCTAG

Protein sequence

MSDDEEMFEIEINMKRYRELRESKCKEVENQGPIRTGEPKGSIVVLGPFFEVVALCFTVALCFKAVALHLIVSR*
Homology
[Close]
BLAST of CsaV3_6G005250 vs. NCBI nr
Match: KGN46142.1 (hypothetical protein Csa_005576 [Cucumis sativus])

HSP 1 Score: 146.0 bits (367), Expect = 1.3e-31
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MSDDEEMFEIEINMKRYRELRESKCKEVENQGPIRTGEPKGSIVVLGPFFEVVALCFTVA 60
          MSDDEEMFEIEINMKRYRELRESKCKEVENQGPIRTGEPKGSIVVLGPFFEVVALCFTVA
Sbjct: 1  MSDDEEMFEIEINMKRYRELRESKCKEVENQGPIRTGEPKGSIVVLGPFFEVVALCFTVA 60

Query: 61 LCFKAVALHLIVSR 75
          LCFKAVALHLIVSR
Sbjct: 61 LCFKAVALHLIVSR 74

[Close]
BLAST of CsaV3_6G005250 vs. ExPASy TrEMBL
Match: A0A0A0KCM3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G056590 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 6.4e-32
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0 

Query: 1  MSDDEEMFEIEINMKRYRELRESKCKEVENQGPIRTGEPKGSIVVLGPFFEVVALCFTVA 60
          MSDDEEMFEIEINMKRYRELRESKCKEVENQGPIRTGEPKGSIVVLGPFFEVVALCFTVA
Sbjct: 1  MSDDEEMFEIEINMKRYRELRESKCKEVENQGPIRTGEPKGSIVVLGPFFEVVALCFTVA 60

Query: 61 LCFKAVALHLIVSR 75
          LCFKAVALHLIVSR
Sbjct: 61 LCFKAVALHLIVSR 74

The following BLAST results are available for this feature:
BLAST of CsaV3_6G005250 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46142.11.3e-31100.00hypothetical protein Csa_005576 [Cucumis sativus][more]
BLAST of CsaV3_6G005250 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G005250 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCM36.4e-32100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G056590 PE=4 SV=1[more]
BLAST of CsaV3_6G005250 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G005250.1CsaV3_6G005250.1mRNA