CsaV3_6G004630 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G004630
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 3944561 .. 3944812 (+)
RNA-Seq ExpressionCsaV3_6G004630
SyntenyCsaV3_6G004630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTGTTGGGGGCAAATGTTTGCCTTCCATGTAGTGCATGTGGGTGGTCTTATGCATAAGTCACATCCCTCTTTGAAATGTTGTTGTTACCAAGTTATTGTAGCTTATTTTAATTTGTTTGAAATCTTTGTGGGTTGCTTGGGTGATGAGGCATATAGTCTGCAAGATAGAAGTGTTCGGGCGGTTAAAGATTCTAAGTCTTCATCTTTGGTGTTAGAAGTCTATCATTTGTGTTTAGGGATAGTTTGA

mRNA sequence

ATGGTGTGTTGGGGGCAAATGTTTGCCTTCCATGTAGTGCATGTGGGTGGTCTTATGCATAAGTCACATCCCTCTTTGAAATGTTGTTGTTACCAAGTTATTGTAGCTTATTTTAATTTGTTTGAAATCTTTGTGGGTTGCTTGGGTGATGAGGCATATAGTCTGCAAGATAGAAGTGTTCGGGCGGTTAAAGATTCTAAGTCTTCATCTTTGGTGTTAGAAGTCTATCATTTGTGTTTAGGGATAGTTTGA

Coding sequence (CDS)

ATGGTGTGTTGGGGGCAAATGTTTGCCTTCCATGTAGTGCATGTGGGTGGTCTTATGCATAAGTCACATCCCTCTTTGAAATGTTGTTGTTACCAAGTTATTGTAGCTTATTTTAATTTGTTTGAAATCTTTGTGGGTTGCTTGGGTGATGAGGCATATAGTCTGCAAGATAGAAGTGTTCGGGCGGTTAAAGATTCTAAGTCTTCATCTTTGGTGTTAGAAGTCTATCATTTGTGTTTAGGGATAGTTTGA

Protein sequence

MVCWGQMFAFHVVHVGGLMHKSHPSLKCCCYQVIVAYFNLFEIFVGCLGDEAYSLQDRSVRAVKDSKSSSLVLEVYHLCLGIV*
Homology
[Close]
BLAST of CsaV3_6G004630 vs. NCBI nr
Match: KAE8646649.1 (hypothetical protein Csa_005629 [Cucumis sativus])

HSP 1 Score: 177.6 bits (449), Expect = 4.6e-41
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1  MVCWGQMFAFHVVHVGGLMHKSHPSLKCCCYQVIVAYFNLFEIFVGCLGDEAYSLQDRSV 60
          MVCWGQMFAFHVVHVGGLMHKSHPSLKCCCYQVIVAYFNLFEIFVGCLGDEAYSLQDRSV
Sbjct: 1  MVCWGQMFAFHVVHVGGLMHKSHPSLKCCCYQVIVAYFNLFEIFVGCLGDEAYSLQDRSV 60

Query: 61 RAVKDSKSSSLVLEVYHLCLGIV 84
          RAVKDSKSSSLVLEVYHLCLGIV
Sbjct: 61 RAVKDSKSSSLVLEVYHLCLGIV 83

[Close]
BLAST of CsaV3_6G004630 vs. ExPASy TrEMBL
Match: A0A0A0LAL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G257850 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.2e-41
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1  MVCWGQMFAFHVVHVGGLMHKSHPSLKCCCYQVIVAYFNLFEIFVGCLGDEAYSLQDRSV 60
          MVCWGQMFAFHVVHVGGLMHKSHPSLKCCCYQVIVAYFNLFEIFVGCLGDEAYSLQDRSV
Sbjct: 1  MVCWGQMFAFHVVHVGGLMHKSHPSLKCCCYQVIVAYFNLFEIFVGCLGDEAYSLQDRSV 60

Query: 61 RAVKDSKSSSLVLEVYHLCLGIV 84
          RAVKDSKSSSLVLEVYHLCLGIV
Sbjct: 61 RAVKDSKSSSLVLEVYHLCLGIV 83

The following BLAST results are available for this feature:
BLAST of CsaV3_6G004630 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646649.14.6e-41100.00hypothetical protein Csa_005629 [Cucumis sativus][more]
BLAST of CsaV3_6G004630 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G004630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAL32.2e-41100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G257850 PE=4 SV=1[more]
BLAST of CsaV3_6G004630 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G004630.1CsaV3_6G004630.1mRNA