CsaV3_6G003590 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGGGAGGCTACATCATAGTGTGATTTTGATTTGATCGCAAAACAAGTATCACACAATGGACTAGAGGCATGTGCCTCTTACCCCATGTAGATCCACCAAGACTCCATTGCATTGCCTGCAATAAATTGAAAAAACTGTATATCTAGTTCATCAACGTAAGAAAATAAATGTGTGAAGGGTGAATCGTCAATGATGAAGACGTGCTAAGTGGGTTAAACGTTCTATATGACCATGGGGTCATCTGTACAAAGAAACACCTTTTTATGGCATAATGGAAAACGATGAAAGAAAAGATCCCTAATTTCTATTTTCTGTGTGTTGTTTGGAGAAATGGGGGCAGAATACAATAGGTGAGAAACTAAGGGCGAGCTCCATTCAAGAGGGTTTAGTCGAACGATTCCGTTCTCTCTCCTCGATCCGATTTGAAGAAACAGAGAGGAAGAGCGTGATGCGAGGAACTGGAGGACCTCTTCTTTGCATTGGCGATCTTCTCTGCGATGTCGGAGAAGACGAAGCCGTAGAAGGAAAGGGTTTGAATGAAACCCCCAGATCAATTCCATCTCCATCTTCTTCCTCTTCTTCTGTTTCCACCACAATTTTCGACCTATCTCAACCCCCCGATCTCCCCAAACTCTTCCAGGTTTCCTCCTCATCCTTCCATTTCCCTTTCCAATTGTTCATTTTGCTAATATTGATTCTATCTACGATTGCGAATGTGATAAGGACTTTACCTATTTTGCTGTATGTTTATTTCCTGTTTCAAATATCATAGCTGCGAGAATTTCACCCTACCCATCTTCTTCTTCAGGAAAATTACGACCAATTGAACAAAGTATTTGATGATAATGATCACTCATGGACTGCTTTGACATTGAAGGTAGGCTGTTTCGCGTGCTGGACATTGAGTACTTATACATTGATATGAAATAATGTCTGTAGCTTACCATTCGATTTCTACAACCCGTTCTTTCCCCATTTCCTTTGATTTGAACAACTGCTTGATTTTTGGGGAGAAGCATTATTTCCTTATATATGACTAATTGGGGCATTTTCAGATGTGCAGTGCTCTTGATACTGCTACCAAGTTGGTTGAATCAACCAACTCGAATTCAAGATTTTTGTTGGAGAAGATTGTTGAGCTTGAACATGTTTTGGAAAAGGGAGATGCTACAAGAGAGGCAGCCATGGCCATCCAAACAAGCTATAGCTCTCATGTTGCTCAAGACTCCATTTCTTCTCTGAATGAAGGTTAGCATAGGCTTGTACTTCAAAGGTTTTCTCATTACTGAAGCCTGATGGAAATTTAATCTTCATAAATGCTCGTTTAGGGTAATTTACATATTCACAGCTTTGATTCATGCTCTTGTTTTTCTTATGCGGTAGGGTGTTGTTGAGAAAATTTTGTTTTCTAATTATTTGTCATCATATTTTGATTGGATTAGAATTAGTAATTCGACTAAATAGAATAAGGTTTATATTGTATTTTGGTCCCTAAAAGTTCTTTCCACTGTCCTTCCTGAATTTTCAAATATTCATTTTAGTTCTTCAACATAAAATGTTCTATTTTGGTCCAAATTTTCTTTTAGCATAATTTCTTTAGTTTTTGTTCTAATGTTAGTATATATCTACTATGAATTACATGGAATGATGCATTGTTTTGCCGTATTAATTATTATTTTCATCCAATTAATCTTTTTTTTTTGTATCTTCTCTAAACTTTAGATCTCATAAAATTATTTTCTTAGGTAGAAAAATGCAAGTACTTTTTTTTTTGTTAGACGTGCATCTCACATATACATTGGAAGAATCAATGCACCCTACCAATTCAATGTGTATAACCAACCTCAGCCTAAATAGATGCATTTAAATAGCATCTATTACATTCTACCTCAAAGAGTTACAACCACTCGATGAAGCACAACACTTCAAAAGTTACAACCATTCGACGAAGGGCAATATGAGAATTCATGTAAAATATAAGGATAAAAGTTACATGTAAAAGACTCTTCTTACATAGCCCTTTTAATATAGTAAAGATCAATGGTGTAGCTTATACGTGCTAGAAATAGCATCGTAATAAGAGCAAGATTTTCAAGTCAAGTTAGCTAGGAAAAAACATTGTGCAAGGTGTGTTTAGGGAGAAAGATGATATAGCAAGGACCAAAAGAATATAAGGGTAACAGGTTGATAGTACGTTGTAAAAAATCTATTGGGTATTGGTCTGGAATTTTCTTTTTGTAGAATTAATTGCTTTCATTGAGAAACAAAGGACAGAAAGAATAAGGGTATACAAAAAAGAACTGAGACTACAAAACTCCTTAGAGAAAGGGCTTCCAACCAAGCAAAATCTTTCCGAAAGGGCTTCCAACCAAGCAAAATCTTTCCTAGAGAATAATTACAAGAAAAATTTAAGACTGAAACCTGACCATTACCACGGACCAGACCTCACTGGGGTTTCTCCATATATACTTGAAGTCTTCTTTTCCATCACCCTGTCCAAGAAGTCCCAATTAACAATGATTGTAAGCTTTCTCAAAGTTGATTTTAAAAATCACACCTTCCTTTTTCTTGGCCCTATAATGCTCAATAGCCTCGTTCGCAGTGAGGCTTGATCAAGAATCTGTCTCCTGCAACAAAGGCTCCCTGAGCTTCAAAAATGGTCGAAGGGAGCACTTTCTTAAGCTAAAGGATCTTATACACCTGTTGTGAGACTGATGGGTTTGAACTCCTGGACCCTCTTAGCATTTTCCTTGGGAATAAGACACAAATGTTTCCAAAAGAGAGTGATTCAGAATACCACTTTCAAAAAAATGTTTGAATACATTTTCTAAGGCCCCCTTCAGAAAATTCCAATTATTTTGGGAAAAAAGCCCTGGAGAAGTCGTCCAGACCCGAAAACTTATTCCTATCACTCCAAAAATGACCTCGATTTCCTCCACAATGAAACGAGACGTCCAAGTCCTCACACTCTCTGAACGAGATGGGATTCTCCAATCAATGCTTTGAAAAAATAGTCTAGGCCTAACGACAATGCTCAACAGGTCCGACAGAAATCTTTTTCATCACCTCCTTATTGTCCTTTGTTCGAAGGGCCTATTCAATCCTTGTTTCTTCCACTTGCCACCGCATGGGGAAAAGAGGCAGAATTCATTTTCATCTTCTGGCACCAACTAGTATTCTCCTCAGCAAACTGCCCTCTAAAGAGGTTCCCTCCCCTCTTTCAGCACATGAACCACAAGTTCCTCCACCTCCACCTCCACCTCCACCTCCTTCACATCAATCTTCTCAATTTTATTGAGAATTTCCTGTTTCTAATTCTTTTATATTTCCAATAACCTGGTCTTAAGACGGTACTTGAGTATTGGTTTTGTATTTAGCTCTGGTATCTTATTCGAAAATATTAGGTTGTTTATCGTTTTTCTTGTCATCTAGATCTTTAAAGCAAAAGAATATTGAATTTTGATTCACGACCCTTTTTTTTTTTCATTTACTAAATAGATATTTAACACCCAAATGTTGTAGGATTAGGTGGATATTTGACACCCAAATGTTGTGAATTAGGCGGATACTTGACA ATGCGAGGAACTGGAGGACCTCTTCTTTGCATTGGCGATCTTCTCTGCGATGTCGGAGAAGACGAAGCCGTAGAAGGAAAGGGTTTGAATGAAACCCCCAGATCAATTCCATCTCCATCTTCTTCCTCTTCTTCTGTTTCCACCACAATTTTCGACCTATCTCAACCCCCCGATCTCCCCAAACTCTTCCAGGAAAATTACGACCAATTGAACAAAGTATTTGATGATAATGATCACTCATGGACTGCTTTGACATTGAAGATGTGCAGTGCTCTTGATACTGCTACCAAGTTGGTTGAATCAACCAACTCGAATTCAAGATTTTTGTTGGAGAAGATTGTTGAGCTTGAACATGTTTTGGAAAAGGGAGATGCTACAAGAGAGGCAGCCATGGCCATCCAAACAAGCTATAGCTCTCATGTTGCTCAAGACTCCATTTCTTCTCTGAATGAAGGTTAG ATGCGAGGAACTGGAGGACCTCTTCTTTGCATTGGCGATCTTCTCTGCGATGTCGGAGAAGACGAAGCCGTAGAAGGAAAGGGTTTGAATGAAACCCCCAGATCAATTCCATCTCCATCTTCTTCCTCTTCTTCTGTTTCCACCACAATTTTCGACCTATCTCAACCCCCCGATCTCCCCAAACTCTTCCAGGAAAATTACGACCAATTGAACAAAGTATTTGATGATAATGATCACTCATGGACTGCTTTGACATTGAAGATGTGCAGTGCTCTTGATACTGCTACCAAGTTGGTTGAATCAACCAACTCGAATTCAAGATTTTTGTTGGAGAAGATTGTTGAGCTTGAACATGTTTTGGAAAAGGGAGATGCTACAAGAGAGGCAGCCATGGCCATCCAAACAAGCTATAGCTCTCATGTTGCTCAAGACTCCATTTCTTCTCTGAATGAAGGTTAG MRGTGGPLLCIGDLLCDVGEDEAVEGKGLNETPRSIPSPSSSSSSVSTTIFDLSQPPDLPKLFQENYDQLNKVFDDNDHSWTALTLKMCSALDTATKLVESTNSNSRFLLEKIVELEHVLEKGDATREAAMAIQTSYSSHVAQDSISSLNEG* Homology
BLAST of CsaV3_6G003590 vs. NCBI nr
Match: XP_004140864.1 (uncharacterized protein LOC101219718 [Cucumis sativus] >KGN45968.1 hypothetical protein Csa_004948 [Cucumis sativus]) HSP 1 Score: 298.5 bits (763), Expect = 3.3e-77 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of CsaV3_6G003590 vs. NCBI nr
Match: XP_008445675.1 (PREDICTED: uncharacterized protein LOC103488633 isoform X4 [Cucumis melo]) HSP 1 Score: 290.0 bits (741), Expect = 1.2e-74 Identity = 146/152 (96.05%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of CsaV3_6G003590 vs. NCBI nr
Match: KAA0063938.1 (uncharacterized protein E6C27_scaffold616G00810 [Cucumis melo var. makuwa] >TYK05201.1 uncharacterized protein E5676_scaffold1415G00780 [Cucumis melo var. makuwa]) HSP 1 Score: 290.0 bits (741), Expect = 1.2e-74 Identity = 146/152 (96.05%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of CsaV3_6G003590 vs. NCBI nr
Match: XP_008445677.1 (PREDICTED: uncharacterized protein LOC103488633 isoform X5 [Cucumis melo]) HSP 1 Score: 287.7 bits (735), Expect = 5.8e-74 Identity = 145/151 (96.03%), Postives = 150/151 (99.34%), Query Frame = 0
BLAST of CsaV3_6G003590 vs. NCBI nr
Match: XP_008445673.1 (PREDICTED: uncharacterized protein LOC103488633 isoform X2 [Cucumis melo]) HSP 1 Score: 287.7 bits (735), Expect = 5.8e-74 Identity = 145/151 (96.03%), Postives = 150/151 (99.34%), Query Frame = 0
BLAST of CsaV3_6G003590 vs. ExPASy TrEMBL
Match: A0A0A0K969 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040570 PE=4 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 1.6e-77 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of CsaV3_6G003590 vs. ExPASy TrEMBL
Match: A0A5D3BZV1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1415G00780 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 5.6e-75 Identity = 146/152 (96.05%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of CsaV3_6G003590 vs. ExPASy TrEMBL
Match: A0A1S3BE50 (uncharacterized protein LOC103488633 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103488633 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 5.6e-75 Identity = 146/152 (96.05%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of CsaV3_6G003590 vs. ExPASy TrEMBL
Match: A0A1S3BCT2 (uncharacterized protein LOC103488633 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103488633 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 2.8e-74 Identity = 145/151 (96.03%), Postives = 150/151 (99.34%), Query Frame = 0
BLAST of CsaV3_6G003590 vs. ExPASy TrEMBL
Match: A0A1S4DVZ1 (uncharacterized protein LOC103488633 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103488633 PE=4 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 2.8e-74 Identity = 145/151 (96.03%), Postives = 150/151 (99.34%), Query Frame = 0
BLAST of CsaV3_6G003590 vs. TAIR 10
Match: AT4G08240.2 (unknown protein; Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 122.5 bits (306), Expect = 3.0e-28 Identity = 64/136 (47.06%), Postives = 92/136 (67.65%), Query Frame = 0
BLAST of CsaV3_6G003590 vs. TAIR 10
Match: AT4G08240.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 122.5 bits (306), Expect = 3.0e-28 Identity = 64/136 (47.06%), Postives = 92/136 (67.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|