CsaV3_6G003160 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G003160
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like
Location	chr6: 2330583 .. 2333523 (-)
RNA-Seq Expression	CsaV3_6G003160
Synteny	CsaV3_6G003160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTATTTTTATCACAGCGTAAGAGAAATATTTGTAGTTAAACCCAGACTTTTGAGTCAGCCTTCGTCTCTCTCTCGATTCCTTCCTTTTTCAAAATTTCCCTTCGTTTTGGTGGGTCTTCTTCGTCACAGAAGAATTGATCCACAGCGAACAAAGGCTTGGTTTTATTCTTTGTTTCATTCGAAAACGGGTCAAAGAGGTATGCGATTTAACAAAATCTGAGCTGCCGAGGTCAATTTCTCTTCTAAACCTAATATCTGATTTGTAATTTCCCCTCATCCTGTTGCCCTTGCCCCTCCCATTGCGATATGAAATTTGATTTATGTTCTTTGTTTGTAATCTTCTGATTCCAATCGCCATGCCTTTCTGATTTCCTTCAAATTTTGTTTCACTTTGTAAAAAAAAAAAAAAAAAAAAGGAGTAAGGAGTGTTCTATGTCTGCTATACTGAACTAATAAACTCTTCAATAATGCTTTTGGTGGTTTTGGGGCTTCAATTCTCAGTTCTTTGCATTGGGAGGATGAGGATTGTGTGTCCTTCGAGATACTTTAATTTTTGTGGCATGGTTATGTAATGATGAGAATGCCTGTTCTTCTGTTGTTTTTGGAGTCTTTCCCCCCTGAATGTTGGTGGAATTAGGCTTCCCCTTTTTGAAATTATTTTCCAAGGAAGAATTTTGTATTTGATTTCTTTCACTAGTGAAGTTAAATTGTTTATTTATTTCTGCATTGACTATTATGATATGCCTTCTGGAAAGAATTTTCTGCCGTTATCTGCATGTGGGATACTTGAAAATGATTTTGTGATCAGTATTTCCTTTTCTACTTTTTTTTTTTTTCAAATGCATTTCTTTTCCGGTGGTGCTACCCAATCATTTCTATCTTGTTCCTTGCTTGAAATTTTCGATTGTTATATTAATGTGTTAATATGATGCCTTTTAATGTGACGACATTTTGTATTCAGAGTGAATTTTGTAATGTGATAAATACTGCATCTTCAGAGCTAAATAGCATCACGTCTCTTTAACTCGAATGATTCTGGTGATGCCATCTTTCAGGACTCTATTCCATGTAATTGTTCTGACTTCTATAAGTTTGAGTTCAAGAAATGTTTATGACATTAATTTGGAATCTCCATTCGTTCTAGTGCCCCGATTTTCAACCTGAATCCAAGAAACTGAACCATCTGTTCCACAGCAGGAACACACTATGCAAATAGCTTGTCAACCCCATCCACTTGTTTACTTCTCAGTAAGGTCTCTTTCTCCTGCTCCCTTGTGCACAAAACTTTTCATTGTTAAGTTTAGGCTGTAAATTGATATTTTAATCTGAAGTGCAGAAGCATCTCTAAGAGACAAGATGGATGGAGGAATGTACAAAACTTGCATTCAAGAAACTTTGTTAAGCTTGTATTGCTGGAACCTCAGATGCATAAATTCGCTATGTCTCTATGCAAAAACAGATTGCATGCAATCCCAAATGCTGAAGATGGGGACCCATCTGCCTCTATGTCAGAAGACATCAATTCGAATCCGGTGCTTGATTCTATAGCAGGAGAGTTGTGGAATAAATGGTCACCTCCAAAATACCTATGGAGGGGGCTATCAGTTCTTTTTCTAACTGGGCAGGTGATTATGAGGACTTTAAAGGGTAAAGTCCATTGGAAAAATACTCTCCAACAGCTAGAGAGAGTAGGGCCAAGATCTGTAGGGGTTTGCCTTCTAACATCTGCATTTGTTGGCATGGCATTTACTATCCAGTTTGTTAGAGAATTTACTAGATTAGGATTAAACAGGTCTGTTGGTGGTGTATTAGCTCTGGCATTCTCAAGGGAGCTAAGTCCTGTCATTACATCGATTGTGGTTGCCGGGAGAATTGGAAGTTCATATGCTGCAGAATTAGGAACAATGCAGGTGTCTGAACAAACAGACACGTTAAGAGTCTTGGGTTCGAACCCTGTTGATTATCTCGTCACTCCAAGAGTTATAGCCTCCTGCATTGCTCTTCCAATTCTAACTTTAATGTGTTTCACAGTTGGGATGGCATCAAGTGCCCTTTTGGCTGACAGTGTTTATGGTGTTAGCATCAACATTATCCTTGACTCAGCTATGAGAGCTCTAAAATCTTGGGATATTATCAGTGCAATGATCAAATCGCAGGTTTTCGGTGCTATTATATCAATTGTAAGCTGCGCTTGGGGTATTACTACTTCAGGGGGTGCTAAGGGGGTCGGGGAGTCCACAACATCAGCCGTTGTCATCTCTCTTGTTGGCATATTTATTGCTGATTTCACACTTTCTTGTTTCTTCTTCCAGGGAGCTGGAGATTCCCTAAAGAACTGTATGTAAATTCATTGAGCCCACATACATAAAAAAGTTTCAGTTGGGGAAAAGAGCATATCAGAATCTGCTGTTTACAACAAACACGACTCCAAGAAGTTTTAACTAATGGGAAGCCATTGGAGGCATATGTGAGTTTTAGTTTCATTACTTTTAGGTTGAAGCAAGAACATTCTGGCTTGTCTTCTCTGATTGACTAGTGAAGAAGGTGCCTTTTTTACGCAGGATTTGAACGGTTCACATTTTATTCCATTTGTGATTAGTAAAATCTCTAGCACATGTTTTGTTAGTAGAGCTTTTACCAAATTTTGATTCTACCCCTAGATGGAAGGTCACTAAAAGAGCACACTTTTGGTTACCATTAGCTTTTATAATTTAAAACGAGTTAGATTCGAAATTTTCAACACATGAATGAGCCTCCCTTGGTTTCTTTACATTCATAACTCAAAATGAATGGCTTTGATTGCAATAAATAATTGTTGTAAATCTGTTCAGTTGCAGTTTGTTGTACATCAGTGACTCGTTCCAAGTTCTTGTACATAAAGGACTTGAGTCAGTTATTTTTCTCTTTCATAATGAAAATGACTTCAGAGCATATGGTTC

mRNA sequence

ATGCAAATAGCTTGTCAACCCCATCCACTTGTTTACTTCTCAGTAAGAAGCATCTCTAAGAGACAAGATGGATGGAGGAATGTACAAAACTTGCATTCAAGAAACTTTGTTAAGCTTGTATTGCTGGAACCTCAGATGCATAAATTCGCTATGTCTCTATGCAAAAACAGATTGCATGCAATCCCAAATGCTGAAGATGGGGACCCATCTGCCTCTATGTCAGAAGACATCAATTCGAATCCGGTGCTTGATTCTATAGCAGGAGAGTTGTGGAATAAATGGTCACCTCCAAAATACCTATGGAGGGGGCTATCAGTTCTTTTTCTAACTGGGCAGGTGATTATGAGGACTTTAAAGGGTAAAGTCCATTGGAAAAATACTCTCCAACAGCTAGAGAGAGTAGGGCCAAGATCTGTAGGGGTTTGCCTTCTAACATCTGCATTTGTTGGCATGGCATTTACTATCCAGTTTGTTAGAGAATTTACTAGATTAGGATTAAACAGGTCTGTTGGTGGTGTATTAGCTCTGGCATTCTCAAGGGAGCTAAGTCCTGTCATTACATCGATTGTGGTTGCCGGGAGAATTGGAAGTTCATATGCTGCAGAATTAGGAACAATGCAGGTGTCTGAACAAACAGACACGTTAAGAGTCTTGGGTTCGAACCCTGTTGATTATCTCGTCACTCCAAGAGTTATAGCCTCCTGCATTGCTCTTCCAATTCTAACTTTAATGTGTTTCACAGTTGGGATGGCATCAAGTGCCCTTTTGGCTGACAGTGTTTATGGTGTTAGCATCAACATTATCCTTGACTCAGCTATGAGAGCTCTAAAATCTTGGGATATTATCAGTGCAATGATCAAATCGCAGGTTTTCGGTGCTATTATATCAATTGTAAGCTGCGCTTGGGGTATTACTACTTCAGGGGGTGCTAAGGGGGTCGGGGAGTCCACAACATCAGCCGTTGTCATCTCTCTTGTTGGCATATTTATTGCTGATTTCACACTTTCTTGTTTCTTCTTCCAGGGAGCTGGAGATTCCCTAAAGAACTGTATGTAA

Coding sequence (CDS)

ATGCAAATAGCTTGTCAACCCCATCCACTTGTTTACTTCTCAGTAAGAAGCATCTCTAAGAGACAAGATGGATGGAGGAATGTACAAAACTTGCATTCAAGAAACTTTGTTAAGCTTGTATTGCTGGAACCTCAGATGCATAAATTCGCTATGTCTCTATGCAAAAACAGATTGCATGCAATCCCAAATGCTGAAGATGGGGACCCATCTGCCTCTATGTCAGAAGACATCAATTCGAATCCGGTGCTTGATTCTATAGCAGGAGAGTTGTGGAATAAATGGTCACCTCCAAAATACCTATGGAGGGGGCTATCAGTTCTTTTTCTAACTGGGCAGGTGATTATGAGGACTTTAAAGGGTAAAGTCCATTGGAAAAATACTCTCCAACAGCTAGAGAGAGTAGGGCCAAGATCTGTAGGGGTTTGCCTTCTAACATCTGCATTTGTTGGCATGGCATTTACTATCCAGTTTGTTAGAGAATTTACTAGATTAGGATTAAACAGGTCTGTTGGTGGTGTATTAGCTCTGGCATTCTCAAGGGAGCTAAGTCCTGTCATTACATCGATTGTGGTTGCCGGGAGAATTGGAAGTTCATATGCTGCAGAATTAGGAACAATGCAGGTGTCTGAACAAACAGACACGTTAAGAGTCTTGGGTTCGAACCCTGTTGATTATCTCGTCACTCCAAGAGTTATAGCCTCCTGCATTGCTCTTCCAATTCTAACTTTAATGTGTTTCACAGTTGGGATGGCATCAAGTGCCCTTTTGGCTGACAGTGTTTATGGTGTTAGCATCAACATTATCCTTGACTCAGCTATGAGAGCTCTAAAATCTTGGGATATTATCAGTGCAATGATCAAATCGCAGGTTTTCGGTGCTATTATATCAATTGTAAGCTGCGCTTGGGGTATTACTACTTCAGGGGGTGCTAAGGGGGTCGGGGAGTCCACAACATCAGCCGTTGTCATCTCTCTTGTTGGCATATTTATTGCTGATTTCACACTTTCTTGTTTCTTCTTCCAGGGAGCTGGAGATTCCCTAAAGAACTGTATGTAA

Protein sequence

MQIACQPHPLVYFSVRSISKRQDGWRNVQNLHSRNFVKLVLLEPQMHKFAMSLCKNRLHAIPNAEDGDPSASMSEDINSNPVLDSIAGELWNKWSPPKYLWRGLSVLFLTGQVIMRTLKGKVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSRELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPILTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDIISAMIKSQVFGAIISIVSCAWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM*

Homology

[Close]

BLAST of CsaV3_6G003160 vs. NCBI nr
Match: XP_031743628.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic [Cucumis sativus] >KGN45927.1 hypothetical protein Csa_005638 [Cucumis sativus])

HSP 1 Score: 685.3 bits (1767), Expect = 2.9e-193
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MQIACQPHPLVYFSVRSISKRQDGWRNVQNLHSRNFVKLVLLEPQMHKFAMSLCKNRLHA 60
           MQIACQPHPLVYFSVRSISKRQDGWRNVQNLHSRNFVKLVLLEPQMHKFAMSLCKNRLHA
Sbjct: 1   MQIACQPHPLVYFSVRSISKRQDGWRNVQNLHSRNFVKLVLLEPQMHKFAMSLCKNRLHA 60

Query: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWNKWSPPKYLWRGLSVLFLTGQVIMRTLKG 120
           IPNAEDGDPSASMSEDINSNPVLDSIAGELWNKWSPPKYLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWNKWSPPKYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180
           KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR
Sbjct: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240
           ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240

Query: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDIISAMIKSQVFGAIISIVSC 300
           LTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDIISAMIKSQVFGAIISIVSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDIISAMIKSQVFGAIISIVSC 300

Query: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 352
           AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM
Sbjct: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351

[Close]

BLAST of CsaV3_6G003160 vs. NCBI nr
Match: XP_008445618.1 (PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X1 [Cucumis melo] >XP_008445620.1 PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X1 [Cucumis melo] >KAA0047199.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1 [Cucumis melo var. makuwa] >TYK17760.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1 [Cucumis melo var. makuwa])

HSP 1 Score: 662.5 bits (1708), Expect = 2.0e-186
Identity = 339/351 (96.58%), Postives = 345/351 (98.29%), Query Frame = 0


Query: 1   MQIACQPHPLVYFSVRSISKRQDGWRNVQNLHSRNFVKLVLLEPQMHKFAMSLCKNRLHA 60
           MQIACQPHPLV FS+RS SKRQDGW+NVQNLHSRN VKLV LE QMHKFAMSLCKNRLHA
Sbjct: 1   MQIACQPHPLVDFSIRSSSKRQDGWKNVQNLHSRNLVKLVFLERQMHKFAMSLCKNRLHA 60

Query: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWNKWSPPKYLWRGLSVLFLTGQVIMRTLKG 120
           IPNAEDGDPSASMSEDINSNPVLDSIAGELW+KWSPP+YLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWSKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180
           KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR
Sbjct: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240
           ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240

Query: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDIISAMIKSQVFGAIISIVSC 300
           LTLMCFTVGMASSALLADSVYGVSINIILDSA+RALKSWDIISAMIKSQVFGAIIS+VSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSALRALKSWDIISAMIKSQVFGAIISVVSC 300

Query: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 352
           AWGITTSGGAKGVGESTTSAVVISLVGI IADFTLSCFFFQGAGDSLKNCM
Sbjct: 301 AWGITTSGGAKGVGESTTSAVVISLVGICIADFTLSCFFFQGAGDSLKNCM 351

[Close]

BLAST of CsaV3_6G003160 vs. NCBI nr
Match: XP_038886545.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X1 [Benincasa hispida] >XP_038886546.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 657.5 bits (1695), Expect = 6.4e-185
Identity = 335/351 (95.44%), Postives = 343/351 (97.72%), Query Frame = 0


Query: 1   MQIACQPHPLVYFSVRSISKRQDGWRNVQNLHSRNFVKLVLLEPQMHKFAMSLCKNRLHA 60
           M IACQPHPLVYFSVRS SKRQDGW+NVQNLHSRNFVKLV +EPQ HKFAM LCKNRL+ 
Sbjct: 1   MLIACQPHPLVYFSVRSSSKRQDGWKNVQNLHSRNFVKLVFVEPQTHKFAMPLCKNRLNG 60

Query: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWNKWSPPKYLWRGLSVLFLTGQVIMRTLKG 120
           IPNAEDG PSASMSEDINSNPVLDS+AGELWNKWSPP+YLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPNAEDGHPSASMSEDINSNPVLDSMAGELWNKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180
           KVHW+NTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR
Sbjct: 121 KVHWRNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240
           ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRV+ASCIALPI
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVLASCIALPI 240

Query: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDIISAMIKSQVFGAIISIVSC 300
           LTLMCFTVGMASSALLADSVYGVSINIILDSA+RALKSWDIISAMIKSQVFGAIISIVSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSALRALKSWDIISAMIKSQVFGAIISIVSC 300

Query: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 352
           AWGITT GGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM
Sbjct: 301 AWGITTLGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351

[Close]

BLAST of CsaV3_6G003160 vs. NCBI nr
Match: XP_008445621.1 (PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 654.1 bits (1686), Expect = 7.0e-184
Identity = 337/351 (96.01%), Postives = 343/351 (97.72%), Query Frame = 0


Query: 1   MQIACQPHPLVYFSVRSISKRQDGWRNVQNLHSRNFVKLVLLEPQMHKFAMSLCKNRLHA 60
           MQIACQPHPLV FS+   SKRQDGW+NVQNLHSRN VKLV LE QMHKFAMSLCKNRLHA
Sbjct: 1   MQIACQPHPLVDFSIS--SKRQDGWKNVQNLHSRNLVKLVFLERQMHKFAMSLCKNRLHA 60

Query: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWNKWSPPKYLWRGLSVLFLTGQVIMRTLKG 120
           IPNAEDGDPSASMSEDINSNPVLDSIAGELW+KWSPP+YLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWSKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180
           KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR
Sbjct: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240
           ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240

Query: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDIISAMIKSQVFGAIISIVSC 300
           LTLMCFTVGMASSALLADSVYGVSINIILDSA+RALKSWDIISAMIKSQVFGAIIS+VSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSALRALKSWDIISAMIKSQVFGAIISVVSC 300

Query: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 352
           AWGITTSGGAKGVGESTTSAVVISLVGI IADFTLSCFFFQGAGDSLKNCM
Sbjct: 301 AWGITTSGGAKGVGESTTSAVVISLVGICIADFTLSCFFFQGAGDSLKNCM 349

[Close]

BLAST of CsaV3_6G003160 vs. NCBI nr
Match: XP_023514306.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023514307.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023514308.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023514309.1 protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 649.8 bits (1675), Expect = 1.3e-182
Identity = 332/351 (94.59%), Postives = 340/351 (96.87%), Query Frame = 0


Query: 1   MQIACQPHPLVYFSVRSISKRQDGWRNVQNLHSRNFVKLVLLEPQMHKFAMSLCKNRLHA 60
           MQIACQPHPLVYFS+RS SKRQ GW+NVQNLHS NFVKLV +EPQ  KFAM LCKNRL+A
Sbjct: 1   MQIACQPHPLVYFSIRSSSKRQSGWKNVQNLHSSNFVKLVFVEPQTRKFAMPLCKNRLNA 60

Query: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWNKWSPPKYLWRGLSVLFLTGQVIMRTLKG 120
           IPNAEDG PSASMSEDINSNPVL+SI GELW+KWSPPKYLWRGLSVLFL GQVIMRTLKG
Sbjct: 61  IPNAEDGHPSASMSEDINSNPVLNSIEGELWSKWSPPKYLWRGLSVLFLAGQVIMRTLKG 120

Query: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180
           KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR
Sbjct: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240
           ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240

Query: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDIISAMIKSQVFGAIISIVSC 300
           LTLMCFTVGMASSALLADSVYGVSINII DSA+RALKSWDIIS+MIKSQVFGAIISIVSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGVSINIIFDSALRALKSWDIISSMIKSQVFGAIISIVSC 300

Query: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 352
           AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM
Sbjct: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351

[Close]

BLAST of CsaV3_6G003160 vs. ExPASy Swiss-Prot
Match: Q8L4R0 (Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TGD1 PE=1 SV=1)

HSP 1 Score: 455.3 bits (1170), Expect = 6.3e-127
Identity = 232/309 (75.08%), Postives = 270/309 (87.38%), Query Frame = 0


Query: 45  QMHKFAMSLCKNRLHAIPNAEDGDPSASMSEDINS--NPVLDSIAGELWNKWSPPKYLWR 104
           Q +  +  + + RL+   NA DG PS SM E+  S  N      A   ++KWSP KY+WR
Sbjct: 42  QSYGISSPIRQRRLYVNLNANDGHPSMSMLEEETSTENNAPSQEAELPFSKWSPSKYIWR 101

Query: 105 GLSVLFLTGQVIMRTLKGKVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFT 164
           GLSV  + GQV++R LKGK+HW+NTLQQLER GP+S+GVCLLTS FVGMAFTIQFVREFT
Sbjct: 102 GLSVPIIAGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFT 161

Query: 165 RLGLNRSVGGVLALAFSRELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNP 224
           RLGLNRS+GGVLALAFSRELSPVITSIVVAGR+GS++AAELGTMQVSEQTDTLRVLG++P
Sbjct: 162 RLGLNRSIGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADP 221

Query: 225 VDYLVTPRVIASCIALPILTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDII 284
           +DYL+TPRVIASC+ALP LTLMCFTVGMASSALL+D+VYG+SINII+DSA RAL+ WDI+
Sbjct: 222 IDYLITPRVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIV 281

Query: 285 SAMIKSQVFGAIISIVSCAWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQG 344
           SAMIKSQVFGAIIS++SC+WG+TT+GGAKGVGESTTSAVV+SLVGIFIADF LS FFFQG
Sbjct: 282 SAMIKSQVFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQG 341

Query: 345 AGDSLKNCM 352
           AGDSLKNC+
Sbjct: 342 AGDSLKNCV 350

[Close]

BLAST of CsaV3_6G003160 vs. ExPASy Swiss-Prot
Match: P73009 (Probable ABC transporter permease protein slr1045 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1045 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.5e-67
Identity = 128/249 (51.41%), Postives = 185/249 (74.30%), Query Frame = 0


Query: 100 LW--RGLSVLFLTGQVIMRTLKGKVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQF 159
           LW  R ++  FLTGQV +  L+G+++ +NTL+Q+  VGP S+ + L+T+ FVGM FTIQ 
Sbjct: 12  LWFQRLVAAFFLTGQVFLHILQGRINRRNTLEQMNMVGPESMAIALITAGFVGMVFTIQV 71

Query: 160 VREFTRLGLNRSVGGVLALAFSRELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRV 219
            REF   G   ++GGVL+L+ +REL+PV+T++V+AGR+GS++AAE+GTM+V+EQ D L +
Sbjct: 72  AREFIYYGATTTIGGVLSLSLTRELAPVLTAVVIAGRVGSAFAAEIGTMRVTEQLDALYM 131

Query: 220 LGSNPVDYLVTPRVIASCIALPILTLMCFTVGMASSALLADSVYGVSINIILDSAMRALK 279
           L ++P+DYLV PRVIA  + LPILT +   VGMA   +++ S+Y ++  I L+S     +
Sbjct: 132 LRTDPIDYLVVPRVIACGLMLPILTGLSLFVGMAGGLVISSSLYAINPTIFLNSVQNFTQ 191

Query: 280 SWDIISAMIKSQVFGAIISIVSCAWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSC 339
            WD+ + + KS VFG II+I+ C+WG+TT+GGAKGVGESTT+AVV SL+ IFI++F LS 
Sbjct: 192 LWDVFACLFKSLVFGVIIAIIGCSWGLTTTGGAKGVGESTTTAVVTSLLAIFISNFFLSW 251

Query: 340 FFFQGAGDS 347
             FQG GD+
Sbjct: 252 LMFQGTGDT 260

[Close]

BLAST of CsaV3_6G003160 vs. ExPASy Swiss-Prot
Match: P51393 (Probable ABC transporter permease protein ycf63 OS=Porphyra purpurea OX=2787 GN=ycf63 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 8.4e-55
Identity = 114/250 (45.60%), Postives = 165/250 (66.00%), Query Frame = 0


Query: 98  KYLWRGLSVLFLTGQVIMRTLKGKVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQF 157
           K++ +  S L L   ++ R    K++  +  +Q+  VGP S+ + LLT+ F+ M FT+Q 
Sbjct: 8   KWIQKLNSTLSLFVSLLARLRTMKINTSSLAEQIYLVGPGSLNITLLTACFISMVFTMQI 67

Query: 158 VREFTRLGLNRSVGGVLALAFSRELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRV 217
            +EF  L    ++G V+ +AF+RELSPV+T++++AG+IGSS+ AE+ TM+ +EQ D L +
Sbjct: 68  AKEFLHLDAASALGAVIVIAFTRELSPVLTAVIIAGKIGSSFTAEIATMETTEQIDALYL 127

Query: 218 LGSNPVDYLVTPRVIASCIALPILTLMCFTVGMASSALLADSVYGVSINIILDSAMRALK 277
           L +NP+DYLV P+V A CI LPIL+ +  T  +A S  ++  +YG+  +I L SA  AL 
Sbjct: 128 LNTNPIDYLVFPKVAACCIMLPILSTISLTASIAISIFVSFVMYGIPSSIFLKSAFLALS 187

Query: 278 SWDIISAMIKSQVFGAIISIVSCAWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSC 337
             D  S + KS  FG II+ +SC WG+T+SGGAKGVG STTS+VV  L+ IFI DF LS 
Sbjct: 188 VSDFFSCLQKSLCFGTIIAFISCQWGLTSSGGAKGVGNSTTSSVVTILLTIFITDFILSY 247

Query: 338 FFFQGAGDSL 348
           F FQ  G S+
Sbjct: 248 FMFQSTGSSI 257

[Close]

BLAST of CsaV3_6G003160 vs. ExPASy Swiss-Prot
Match: Q1XD94 (Probable ABC transporter permease protein ycf63 OS=Pyropia yezoensis OX=2788 GN=ycf63 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.0e-52
Identity = 108/250 (43.20%), Postives = 164/250 (65.60%), Query Frame = 0


Query: 98  KYLWRGLSVLFLTGQVIMRTLKGKVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQF 157
           K++ R  S + L  ++++R    KV+  N ++Q+  VGP S+ + LLT+ F+ M FT+Q 
Sbjct: 8   KWIQRFSSTIRLFFRLLIRLKTIKVNTNNLVEQIYIVGPGSLNITLLTACFISMVFTMQI 67

Query: 158 VREFTRLGLNRSVGGVLALAFSRELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRV 217
            +EF  L    ++G V+ +AF+RELSPV+T++++AG+IGSS+ AE+ TM+ +EQ D L +
Sbjct: 68  AKEFLYLDAASAIGAVIVIAFTRELSPVLTAVIIAGKIGSSFTAEIATMETTEQIDALYL 127

Query: 218 LGSNPVDYLVTPRVIASCIALPILTLMCFTVGMASSALLADSVYGVSINIILDSAMRALK 277
           L +NP+DYLV P+V +  + LPIL+++  T  +A S  +A  +Y +  ++ L SA  AL 
Sbjct: 128 LNTNPIDYLVFPKVASCFLMLPILSIISLTASIAISLFVAFVMYDIPSSVFLKSAFNALS 187

Query: 278 SWDIISAMIKSQVFGAIISIVSCAWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSC 337
             D +  + KS  F  II  +SC WG+T++GGAKGVG STTS+VV  L  +FI DF LS 
Sbjct: 188 ISDFLICLEKSMFFAIIIGFISCQWGLTSNGGAKGVGNSTTSSVVTILFTVFITDFVLSY 247

Query: 338 FFFQGAGDSL 348
           F FQ  G S+
Sbjct: 248 FMFQTTGSSI 257

[Close]

BLAST of CsaV3_6G003160 vs. ExPASy Swiss-Prot
Match: Q9ZE51 (Probable ABC transporter permease protein RP096 OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=RP096 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.8e-34
Identity = 88/228 (38.60%), Postives = 136/228 (59.65%), Query Frame = 0


Query: 114 IMRTLKGKVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGV 173
           I   +K  ++    ++QL  +G  S+ V  +T+ F G    +Q    F+R     S+  V
Sbjct: 31  ISSIIKPPLYLSLIIRQLLFIGFHSLPVVAMTTFFSGAVLALQSYTGFSRFSAENSIATV 90

Query: 174 LALAFSRELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIA 233
           + L+ +REL PV+  ++VAGR+G+S AAE+ TM+V+EQ D L  L ++P+ YLV PRVIA
Sbjct: 91  VVLSLTRELGPVLAGLIVAGRVGASIAAEIATMRVTEQVDALYTLSTDPIKYLVCPRVIA 150

Query: 234 SCIALPILTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDIISAMIKSQVFGA 293
           + I +P L L+   +G+    L+       +    L S  + L+  D+IS +IK+ VFG 
Sbjct: 151 AIITMPCLVLIGDIIGVMGGYLVGIYKLDFNSTAYLTSTFQYLEPIDVISGLIKATVFGF 210

Query: 294 IISIVSCAWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQ 342
           IISI+SC  G  +  GAKGVG +TTSAVV S + I I+++ ++  FF+
Sbjct: 211 IISIISCYSGYYSGKGAKGVGRATTSAVVNSSILILISNYLITELFFK 258

[Close]

BLAST of CsaV3_6G003160 vs. ExPASy TrEMBL
Match: A0A0A0KC25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G022380 PE=3 SV=1)

HSP 1 Score: 685.3 bits (1767), Expect = 1.4e-193
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 1   MQIACQPHPLVYFSVRSISKRQDGWRNVQNLHSRNFVKLVLLEPQMHKFAMSLCKNRLHA 60
           MQIACQPHPLVYFSVRSISKRQDGWRNVQNLHSRNFVKLVLLEPQMHKFAMSLCKNRLHA
Sbjct: 1   MQIACQPHPLVYFSVRSISKRQDGWRNVQNLHSRNFVKLVLLEPQMHKFAMSLCKNRLHA 60

Query: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWNKWSPPKYLWRGLSVLFLTGQVIMRTLKG 120
           IPNAEDGDPSASMSEDINSNPVLDSIAGELWNKWSPPKYLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWNKWSPPKYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180
           KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR
Sbjct: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240
           ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240

Query: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDIISAMIKSQVFGAIISIVSC 300
           LTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDIISAMIKSQVFGAIISIVSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDIISAMIKSQVFGAIISIVSC 300

Query: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 352
           AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM
Sbjct: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 351

[Close]

BLAST of CsaV3_6G003160 vs. ExPASy TrEMBL
Match: A0A1S3BD54 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488585 PE=3 SV=1)

HSP 1 Score: 662.5 bits (1708), Expect = 9.6e-187
Identity = 339/351 (96.58%), Postives = 345/351 (98.29%), Query Frame = 0


Query: 1   MQIACQPHPLVYFSVRSISKRQDGWRNVQNLHSRNFVKLVLLEPQMHKFAMSLCKNRLHA 60
           MQIACQPHPLV FS+RS SKRQDGW+NVQNLHSRN VKLV LE QMHKFAMSLCKNRLHA
Sbjct: 1   MQIACQPHPLVDFSIRSSSKRQDGWKNVQNLHSRNLVKLVFLERQMHKFAMSLCKNRLHA 60

Query: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWNKWSPPKYLWRGLSVLFLTGQVIMRTLKG 120
           IPNAEDGDPSASMSEDINSNPVLDSIAGELW+KWSPP+YLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWSKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180
           KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR
Sbjct: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240
           ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240

Query: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDIISAMIKSQVFGAIISIVSC 300
           LTLMCFTVGMASSALLADSVYGVSINIILDSA+RALKSWDIISAMIKSQVFGAIIS+VSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSALRALKSWDIISAMIKSQVFGAIISVVSC 300

Query: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 352
           AWGITTSGGAKGVGESTTSAVVISLVGI IADFTLSCFFFQGAGDSLKNCM
Sbjct: 301 AWGITTSGGAKGVGESTTSAVVISLVGICIADFTLSCFFFQGAGDSLKNCM 351

[Close]

BLAST of CsaV3_6G003160 vs. ExPASy TrEMBL
Match: A0A5D3D286 (Protein TRIGALACTOSYLDIACYLGLYCEROL 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3919G00030 PE=3 SV=1)

HSP 1 Score: 662.5 bits (1708), Expect = 9.6e-187
Identity = 339/351 (96.58%), Postives = 345/351 (98.29%), Query Frame = 0


Query: 1   MQIACQPHPLVYFSVRSISKRQDGWRNVQNLHSRNFVKLVLLEPQMHKFAMSLCKNRLHA 60
           MQIACQPHPLV FS+RS SKRQDGW+NVQNLHSRN VKLV LE QMHKFAMSLCKNRLHA
Sbjct: 1   MQIACQPHPLVDFSIRSSSKRQDGWKNVQNLHSRNLVKLVFLERQMHKFAMSLCKNRLHA 60

Query: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWNKWSPPKYLWRGLSVLFLTGQVIMRTLKG 120
           IPNAEDGDPSASMSEDINSNPVLDSIAGELW+KWSPP+YLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWSKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180
           KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR
Sbjct: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240
           ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240

Query: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDIISAMIKSQVFGAIISIVSC 300
           LTLMCFTVGMASSALLADSVYGVSINIILDSA+RALKSWDIISAMIKSQVFGAIIS+VSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSALRALKSWDIISAMIKSQVFGAIISVVSC 300

Query: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 352
           AWGITTSGGAKGVGESTTSAVVISLVGI IADFTLSCFFFQGAGDSLKNCM
Sbjct: 301 AWGITTSGGAKGVGESTTSAVVISLVGICIADFTLSCFFFQGAGDSLKNCM 351

[Close]

BLAST of CsaV3_6G003160 vs. ExPASy TrEMBL
Match: A0A1S3BCN2 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488585 PE=3 SV=1)

HSP 1 Score: 654.1 bits (1686), Expect = 3.4e-184
Identity = 337/351 (96.01%), Postives = 343/351 (97.72%), Query Frame = 0


Query: 1   MQIACQPHPLVYFSVRSISKRQDGWRNVQNLHSRNFVKLVLLEPQMHKFAMSLCKNRLHA 60
           MQIACQPHPLV FS+   SKRQDGW+NVQNLHSRN VKLV LE QMHKFAMSLCKNRLHA
Sbjct: 1   MQIACQPHPLVDFSIS--SKRQDGWKNVQNLHSRNLVKLVFLERQMHKFAMSLCKNRLHA 60

Query: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWNKWSPPKYLWRGLSVLFLTGQVIMRTLKG 120
           IPNAEDGDPSASMSEDINSNPVLDSIAGELW+KWSPP+YLWRGLSVLFLTGQVIMRTLKG
Sbjct: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWSKWSPPRYLWRGLSVLFLTGQVIMRTLKG 120

Query: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180
           KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR
Sbjct: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240
           ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240

Query: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDIISAMIKSQVFGAIISIVSC 300
           LTLMCFTVGMASSALLADSVYGVSINIILDSA+RALKSWDIISAMIKSQVFGAIIS+VSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSALRALKSWDIISAMIKSQVFGAIISVVSC 300

Query: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 352
           AWGITTSGGAKGVGESTTSAVVISLVGI IADFTLSCFFFQGAGDSLKNCM
Sbjct: 301 AWGITTSGGAKGVGESTTSAVVISLVGICIADFTLSCFFFQGAGDSLKNCM 349

[Close]

BLAST of CsaV3_6G003160 vs. ExPASy TrEMBL
Match: A0A6J1HAJ7 (protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111461075 PE=3 SV=1)

HSP 1 Score: 642.9 bits (1657), Expect = 7.9e-181
Identity = 327/351 (93.16%), Postives = 339/351 (96.58%), Query Frame = 0


Query: 1   MQIACQPHPLVYFSVRSISKRQDGWRNVQNLHSRNFVKLVLLEPQMHKFAMSLCKNRLHA 60
           MQIACQPHPLVYFS+RS SKR++GW+N+QNLHS NFVKLV +EPQ  KFAM LCKNRL+A
Sbjct: 1   MQIACQPHPLVYFSIRSSSKRKNGWKNIQNLHSSNFVKLVFVEPQTRKFAMPLCKNRLNA 60

Query: 61  IPNAEDGDPSASMSEDINSNPVLDSIAGELWNKWSPPKYLWRGLSVLFLTGQVIMRTLKG 120
           IPNAEDG PSASMSEDINSNPVL+SI GELW+KW PPKYLWRGLSVLFL GQVIMRTLKG
Sbjct: 61  IPNAEDGHPSASMSEDINSNPVLNSIEGELWSKWWPPKYLWRGLSVLFLAGQVIMRTLKG 120

Query: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180
           KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR
Sbjct: 121 KVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFTRLGLNRSVGGVLALAFSR 180

Query: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240
           ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI
Sbjct: 181 ELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNPVDYLVTPRVIASCIALPI 240

Query: 241 LTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDIISAMIKSQVFGAIISIVSC 300
           LTLMCFTVGMASSALLADSVYGVSINII DSA+RALKSWDIIS+MIKSQVFGAIISIVSC
Sbjct: 241 LTLMCFTVGMASSALLADSVYGVSINIIFDSALRALKSWDIISSMIKSQVFGAIISIVSC 300

Query: 301 AWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSLKNCM 352
            WGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDS+KNCM
Sbjct: 301 GWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQGAGDSVKNCM 351

[Close]

BLAST of CsaV3_6G003160 vs. TAIR 10
Match: AT1G19800.2 (trigalactosyldiacylglycerol 1 )

HSP 1 Score: 455.3 bits (1170), Expect = 4.5e-128
Identity = 232/309 (75.08%), Postives = 270/309 (87.38%), Query Frame = 0


Query: 45  QMHKFAMSLCKNRLHAIPNAEDGDPSASMSEDINS--NPVLDSIAGELWNKWSPPKYLWR 104
           Q +  +  + + RL+   NA DG PS SM E+  S  N      A   ++KWSP KY+WR
Sbjct: 42  QSYGISSPIRQRRLYVNLNANDGHPSMSMLEEETSTENNAPSQEAELPFSKWSPSKYIWR 101

Query: 105 GLSVLFLTGQVIMRTLKGKVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFT 164
           GLSV  + GQV++R LKGK+HW+NTLQQLER GP+S+GVCLLTS FVGMAFTIQFVREFT
Sbjct: 102 GLSVPIIAGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFT 161

Query: 165 RLGLNRSVGGVLALAFSRELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNP 224
           RLGLNRS+GGVLALAFSRELSPVITSIVVAGR+GS++AAELGTMQVSEQTDTLRVLG++P
Sbjct: 162 RLGLNRSIGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADP 221

Query: 225 VDYLVTPRVIASCIALPILTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDII 284
           +DYL+TPRVIASC+ALP LTLMCFTVGMASSALL+D+VYG+SINII+DSA RAL+ WDI+
Sbjct: 222 IDYLITPRVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIV 281

Query: 285 SAMIKSQVFGAIISIVSCAWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQG 344
           SAMIKSQVFGAIIS++SC+WG+TT+GGAKGVGESTTSAVV+SLVGIFIADF LS FFFQG
Sbjct: 282 SAMIKSQVFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQG 341

Query: 345 AGDSLKNCM 352
           AGDSLKNC+
Sbjct: 342 AGDSLKNCV 350

[Close]

BLAST of CsaV3_6G003160 vs. TAIR 10
Match: AT1G19800.3 (trigalactosyldiacylglycerol 1 )

HSP 1 Score: 455.3 bits (1170), Expect = 4.5e-128
Identity = 232/309 (75.08%), Postives = 270/309 (87.38%), Query Frame = 0


Query: 45  QMHKFAMSLCKNRLHAIPNAEDGDPSASMSEDINS--NPVLDSIAGELWNKWSPPKYLWR 104
           Q +  +  + + RL+   NA DG PS SM E+  S  N      A   ++KWSP KY+WR
Sbjct: 42  QSYGISSPIRQRRLYVNLNANDGHPSMSMLEEETSTENNAPSQEAELPFSKWSPSKYIWR 101

Query: 105 GLSVLFLTGQVIMRTLKGKVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFT 164
           GLSV  + GQV++R LKGK+HW+NTLQQLER GP+S+GVCLLTS FVGMAFTIQFVREFT
Sbjct: 102 GLSVPIIAGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFT 161

Query: 165 RLGLNRSVGGVLALAFSRELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNP 224
           RLGLNRS+GGVLALAFSRELSPVITSIVVAGR+GS++AAELGTMQVSEQTDTLRVLG++P
Sbjct: 162 RLGLNRSIGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADP 221

Query: 225 VDYLVTPRVIASCIALPILTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDII 284
           +DYL+TPRVIASC+ALP LTLMCFTVGMASSALL+D+VYG+SINII+DSA RAL+ WDI+
Sbjct: 222 IDYLITPRVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIV 281

Query: 285 SAMIKSQVFGAIISIVSCAWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQG 344
           SAMIKSQVFGAIIS++SC+WG+TT+GGAKGVGESTTSAVV+SLVGIFIADF LS FFFQG
Sbjct: 282 SAMIKSQVFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQG 341

Query: 345 AGDSLKNCM 352
           AGDSLKNC+
Sbjct: 342 AGDSLKNCV 350

[Close]

BLAST of CsaV3_6G003160 vs. TAIR 10
Match: AT1G19800.1 (trigalactosyldiacylglycerol 1 )

HSP 1 Score: 455.3 bits (1170), Expect = 4.5e-128
Identity = 232/309 (75.08%), Postives = 270/309 (87.38%), Query Frame = 0


Query: 45  QMHKFAMSLCKNRLHAIPNAEDGDPSASMSEDINS--NPVLDSIAGELWNKWSPPKYLWR 104
           Q +  +  + + RL+   NA DG PS SM E+  S  N      A   ++KWSP KY+WR
Sbjct: 42  QSYGISSPIRQRRLYVNLNANDGHPSMSMLEEETSTENNAPSQEAELPFSKWSPSKYIWR 101

Query: 105 GLSVLFLTGQVIMRTLKGKVHWKNTLQQLERVGPRSVGVCLLTSAFVGMAFTIQFVREFT 164
           GLSV  + GQV++R LKGK+HW+NTLQQLER GP+S+GVCLLTS FVGMAFTIQFVREFT
Sbjct: 102 GLSVPIIAGQVVLRILKGKIHWRNTLQQLERTGPKSLGVCLLTSTFVGMAFTIQFVREFT 161

Query: 165 RLGLNRSVGGVLALAFSRELSPVITSIVVAGRIGSSYAAELGTMQVSEQTDTLRVLGSNP 224
           RLGLNRS+GGVLALAFSRELSPVITSIVVAGR+GS++AAELGTMQVSEQTDTLRVLG++P
Sbjct: 162 RLGLNRSIGGVLALAFSRELSPVITSIVVAGRMGSAFAAELGTMQVSEQTDTLRVLGADP 221

Query: 225 VDYLVTPRVIASCIALPILTLMCFTVGMASSALLADSVYGVSINIILDSAMRALKSWDII 284
           +DYL+TPRVIASC+ALP LTLMCFTVGMASSALL+D+VYG+SINII+DSA RAL+ WDI+
Sbjct: 222 IDYLITPRVIASCLALPFLTLMCFTVGMASSALLSDAVYGISINIIMDSAHRALRPWDIV 281

Query: 285 SAMIKSQVFGAIISIVSCAWGITTSGGAKGVGESTTSAVVISLVGIFIADFTLSCFFFQG 344
           SAMIKSQVFGAIIS++SC+WG+TT+GGAKGVGESTTSAVV+SLVGIFIADF LS FFFQG
Sbjct: 282 SAMIKSQVFGAIISVISCSWGVTTTGGAKGVGESTTSAVVMSLVGIFIADFVLSSFFFQG 341

Query: 345 AGDSLKNCM 352
           AGDSLKNC+
Sbjct: 342 AGDSLKNCV 350

The following BLAST results are available for this feature:

BLAST of CsaV3_6G003160 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031743628.1	2.9e-193	100.00	protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic [Cucumis sativus] >KGN45927...	[more]
XP_008445618.1	2.0e-186	96.58	PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X1 [Cucu...	[more]
XP_038886545.1	6.4e-185	95.44	protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X1 [Benincasa hispi...	[more]
XP_008445621.1	7.0e-184	96.01	PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X2 [Cucu...	[more]
XP_023514306.1	1.3e-182	94.59	protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like [Cucurbita pepo subsp....	[more]

BLAST of CsaV3_6G003160 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L4R0	6.3e-127	75.08	Protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic OS=Arabidopsis thaliana OX=...	[more]
P73009	1.5e-67	51.41	Probable ABC transporter permease protein slr1045 OS=Synechocystis sp. (strain P...	[more]
P51393	8.4e-55	45.60	Probable ABC transporter permease protein ycf63 OS=Porphyra purpurea OX=2787 GN=...	[more]
Q1XD94	3.0e-52	43.20	Probable ABC transporter permease protein ycf63 OS=Pyropia yezoensis OX=2788 GN=...	[more]
Q9ZE51	4.8e-34	38.60	Probable ABC transporter permease protein RP096 OS=Rickettsia prowazekii (strain...	[more]

BLAST of CsaV3_6G003160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KC25	1.4e-193	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G022380 PE=3 SV=1	[more]
A0A1S3BD54	9.6e-187	96.58	protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X1 OS=Cucumis melo ...	[more]
A0A5D3D286	9.6e-187	96.58	Protein TRIGALACTOSYLDIACYLGLYCEROL 1 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3BCN2	3.4e-184	96.01	protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic isoform X2 OS=Cucumis melo ...	[more]
A0A6J1HAJ7	7.9e-181	93.16	protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic-like OS=Cucurbita moschata ...	[more]

BLAST of CsaV3_6G003160 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19800.2	4.5e-128	75.08	trigalactosyldiacylglycerol 1	[more]
AT1G19800.3	4.5e-128	75.08	trigalactosyldiacylglycerol 1	[more]
AT1G19800.1	4.5e-128	75.08	trigalactosyldiacylglycerol 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003453	ABC transport permease subunit MlaE, Proteobacteria	TIGRFAM	TIGR00056	TIGR00056	coord: 103..342 e-value: 2.1E-74 score: 248.4
IPR030802	ABC transporter permease MalE	PFAM	PF02405	MlaE	coord: 128..336 e-value: 1.4E-68 score: 230.7
IPR030802	ABC transporter permease MalE	PANTHER	PTHR30188	ABC TRANSPORTER PERMEASE PROTEIN-RELATED	coord: 1..351
None	No IPR available	PANTHER	PTHR30188:SF4	PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 1, CHLOROPLASTIC	coord: 1..351

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G003160.1	CsaV3_6G003160.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0043190	ATP-binding cassette (ABC) transporter complex