CsaV3_6G002470 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G002470
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 1696523 .. 1696772 (+)
RNA-Seq ExpressionCsaV3_6G002470
SyntenyCsaV3_6G002470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGGGAATGTCTATCTGATACATTTTCTAAAGTTATCTGGATACTGCATGTTTGAAACTCAAGGATACAGTAATACAATCTATAGAATAGTTCTTATCTATCGTCAGTACACTAGGACATATATACTAAAGATAGACTTGAACGTTATTAACAGCCAAAGAATCAAATACTTTACAAGCAGACACTTCATCCATAAAATATTACAACCCTCCTGGGCATGGTGTTAGTGCAGAGTTATCCGTGTAG

mRNA sequence

ATGTTTGGGAATGTCTATCTGATACATTTTCTAAAGTTATCTGGATACTGCATGTTTGAAACTCAAGGATACACCAAAGAATCAAATACTTTACAAGCAGACACTTCATCCATAAAATATTACAACCCTCCTGGGCATGGTGTTAGTGCAGAGTTATCCGTGTAG

Coding sequence (CDS)

ATGTTTGGGAATGTCTATCTGATACATTTTCTAAAGTTATCTGGATACTGCATGTTTGAAACTCAAGGATACACCAAAGAATCAAATACTTTACAAGCAGACACTTCATCCATAAAATATTACAACCCTCCTGGGCATGGTGTTAGTGCAGAGTTATCCGTGTAG

Protein sequence

MFGNVYLIHFLKLSGYCMFETQGYTKESNTLQADTSSIKYYNPPGHGVSAELSV*
Homology
[Close]
BLAST of CsaV3_6G002470 vs. NCBI nr
Match: KAE8646582.1 (hypothetical protein Csa_004941 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 1.4e-22
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1  MFGNVYLIHFLKLSGYCMFETQGYTKESNTLQADTSSIKYYNPPGHGVSAELSV 55
          MFGNVYLIHFLKLSGYCMFETQGYTKESNTLQADTSSIKYYNPPGHGVSAELSV
Sbjct: 1  MFGNVYLIHFLKLSGYCMFETQGYTKESNTLQADTSSIKYYNPPGHGVSAELSV 54

[Close]
BLAST of CsaV3_6G002470 vs. ExPASy TrEMBL
Match: A0A0A0K517 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G088710 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.8e-23
Identity = 54/54 (100.00%), Postives = 54/54 (100.00%), Query Frame = 0 

Query: 1  MFGNVYLIHFLKLSGYCMFETQGYTKESNTLQADTSSIKYYNPPGHGVSAELSV 55
          MFGNVYLIHFLKLSGYCMFETQGYTKESNTLQADTSSIKYYNPPGHGVSAELSV
Sbjct: 1  MFGNVYLIHFLKLSGYCMFETQGYTKESNTLQADTSSIKYYNPPGHGVSAELSV 54

The following BLAST results are available for this feature:
BLAST of CsaV3_6G002470 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646582.11.4e-22100.00hypothetical protein Csa_004941 [Cucumis sativus][more]
BLAST of CsaV3_6G002470 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G002470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5176.8e-23100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G088710 PE=4 SV=1[more]
BLAST of CsaV3_6G002470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G002470.1CsaV3_6G002470.1mRNA