CsaV3_6G002070 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G002070
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Heavy metal transport/detoxification superfamily protein
Location	chr6: 1422605 .. 1422919 (-)
RNA-Seq Expression	CsaV3_6G002070
Synteny	CsaV3_6G002070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGTGGAATTGAAGGTCTTTTTGCATTGTGAGGAGTGTATCAAGAAGATTCTCAAAGCCATCAAGAAAATCCAAGGTTTGTGTTTTCAATGTCTTCGTCAGAGCCTCCTATGGTTAAGTAATTCATTTGGGGTTTATTTTCCTTTCTTTTCTTCTCCATTTGCAGATATAGAAACATATAATGTAGATATGGAGATGAACAAAGTGATTGTTACAGGCAATGTCACTAACGAAGAAGTTATCAAAGTTCTTCAGAAAATTAGAAAAACTGCAATTCCATGGCAAGATGATGAACTCAACAACATTAATTACTAG

mRNA sequence

GTGGTGGAATTGAAGGTCTTTTTGCATTGTGAGGAGTGTATCAAGAAGATTCTCAAAGCCATCAAGAAAATCCAAGATATAGAAACATATAATGTAGATATGGAGATGAACAAAGTGATTGTTACAGGCAATGTCACTAACGAAGAAGTTATCAAAGTTCTTCAGAAAATTAGAAAAACTGCAATTCCATGGCAAGATGATGAACTCAACAACATTAATTACTAG

Coding sequence (CDS)

GTGGTGGAATTGAAGGTCTTTTTGCATTGTGAGGAGTGTATCAAGAAGATTCTCAAAGCCATCAAGAAAATCCAAGATATAGAAACATATAATGTAGATATGGAGATGAACAAAGTGATTGTTACAGGCAATGTCACTAACGAAGAAGTTATCAAAGTTCTTCAGAAAATTAGAAAAACTGCAATTCCATGGCAAGATGATGAACTCAACAACATTAATTACTAG

Protein sequence

VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKTAIPWQDDELNNINY*

Homology

[Close]

BLAST of CsaV3_6G002070 vs. NCBI nr
Match: XP_004138408.1 (protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucumis sativus])

HSP 1 Score: 147.5 bits (371), Expect = 4.6e-32
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 60
          VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT
Sbjct: 4  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 63

Query: 61 AIPWQDDELNNINY 75
          AIPWQDDELNNINY
Sbjct: 64 AIPWQDDELNNINY 77

[Close]

BLAST of CsaV3_6G002070 vs. NCBI nr
Match: KAE8646572.1 (hypothetical protein Csa_004951, partial [Cucumis sativus])

HSP 1 Score: 147.5 bits (371), Expect = 4.6e-32
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 60
          VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT
Sbjct: 1  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 60

Query: 61 AIPWQDDELNNINY 75
          AIPWQDDELNNINY
Sbjct: 61 AIPWQDDELNNINY 74

[Close]

BLAST of CsaV3_6G002070 vs. NCBI nr
Match: KAA0052042.1 (superoxide dismutase 1 copper chaperone [Cucumis melo var. makuwa] >TYK04519.1 superoxide dismutase 1 copper chaperone [Cucumis melo var. makuwa])

HSP 1 Score: 141.0 bits (354), Expect = 4.3e-30
Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 60
          VVELKVFLHC+ECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT
Sbjct: 3  VVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 62

Query: 61 AIPWQDDELNNI 73
          A+PWQDDELNNI
Sbjct: 63 AVPWQDDELNNI 74

[Close]

BLAST of CsaV3_6G002070 vs. NCBI nr
Match: XP_008456748.1 (PREDICTED: superoxide dismutase 1 copper chaperone [Cucumis melo])

HSP 1 Score: 141.0 bits (354), Expect = 4.3e-30
Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 60
          VVELKVFLHC+ECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT
Sbjct: 4  VVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 63

Query: 61 AIPWQDDELNNI 73
          A+PWQDDELNNI
Sbjct: 64 AVPWQDDELNNI 75

[Close]

BLAST of CsaV3_6G002070 vs. NCBI nr
Match: XP_038884077.1 (copper transport protein ATX1 [Benincasa hispida])

HSP 1 Score: 134.8 bits (338), Expect = 3.1e-28
Identity = 69/73 (94.52%), Postives = 70/73 (95.89%), Query Frame = 0


Query: 1  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 60
          VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVT EEVIKVLQKIRKT
Sbjct: 4  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTKEEVIKVLQKIRKT 63

Query: 61 AIPWQDDELNNIN 74
          AIPWQ D LNNI+
Sbjct: 64 AIPWQADGLNNID 76

[Close]

BLAST of CsaV3_6G002070 vs. ExPASy Swiss-Prot
Match: Q84J88 (Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX=3702 GN=HIPP36 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.8e-07
Identity = 30/70 (42.86%), Postives = 41/70 (58.57%), Query Frame = 0


Query: 4   LKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKTAIP 63
           L+V +HCE C +KI K + KI  + T N+D++  KV V GNV  E +IK + K  + A  
Sbjct: 34  LRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRHAEL 93

Query: 64  WQDDELNNIN 74
           W     NNIN
Sbjct: 94  WPTSMENNIN 103

[Close]

BLAST of CsaV3_6G002070 vs. ExPASy Swiss-Prot
Match: B3H6D0 (Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX=3702 GN=HIPP45 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 4.0e-07
Identity = 26/64 (40.62%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 1  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 60
          +VEL V + C+ C KK+ +AI K+  ++T  +D++  KV VTG V  EEV+K++++  +T
Sbjct: 17 IVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRT 76

Query: 61 AIPW 65
          A  W
Sbjct: 77 AEYW 80

[Close]

BLAST of CsaV3_6G002070 vs. ExPASy Swiss-Prot
Match: F4JZL7 (Heavy metal-associated isoprenylated plant protein 33 OS=Arabidopsis thaliana OX=3702 GN=HIPP33 PE=2 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 2.2e-05
Identity = 26/61 (42.62%), Postives = 38/61 (62.30%), Query Frame = 0


Query: 4  LKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKTAIP 63
          LKV +HC+ C +K+ K ++KI+ + T  +D E+ KV V+GNV    +IK L K  K A  
Sbjct: 14 LKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGKHAEI 73

Query: 64 W 65
          W
Sbjct: 74 W 74

[Close]

BLAST of CsaV3_6G002070 vs. ExPASy Swiss-Prot
Match: Q9M8K5 (Heavy metal-associated isoprenylated plant protein 32 OS=Arabidopsis thaliana OX=3702 GN=HIPP32 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 3.8e-05
Identity = 27/68 (39.71%), Postives = 40/68 (58.82%), Query Frame = 0


Query: 4  LKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKTAIP 63
          LKV +HC+ C +K+ K ++KI+ + T  +D E  KV V+G+V    +IK L K  K A  
Sbjct: 14 LKVNIHCDGCKQKVKKILQKIEGVFTTKIDSEQGKVTVSGSVDPSVLIKKLAKSGKHAEI 73

Query: 64 WQDDELNN 72
          W   + NN
Sbjct: 74 WGAPKGNN 81

[Close]

BLAST of CsaV3_6G002070 vs. ExPASy Swiss-Prot
Match: Q9SJL2 (Heavy metal-associated isoprenylated plant protein 5 OS=Arabidopsis thaliana OX=3702 GN=HIPP05 PE=1 SV=2)

HSP 1 Score: 48.1 bits (113), Expect = 4.9e-05
Identity = 27/64 (42.19%), Postives = 42/64 (65.62%), Query Frame = 0


Query: 1   VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVL-QKIRK 60
           VV LK+ LHCE CI+KI K I KI+ +ET  +D   + V V G +  +E++ +L +K+++
Sbjct: 155 VVPLKIRLHCEGCIQKIKKIILKIKGVETVAIDGAKDVVTVKGTIDVKELVPLLTKKLKR 214

Query: 61  TAIP 64
           T  P
Sbjct: 215 TVEP 218

[Close]

BLAST of CsaV3_6G002070 vs. ExPASy TrEMBL
Match: A0A0A0K8N1 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G013360 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.2e-32
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0


Query: 1  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 60
          VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT
Sbjct: 4  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 63

Query: 61 AIPWQDDELNNINY 75
          AIPWQDDELNNINY
Sbjct: 64 AIPWQDDELNNINY 77

[Close]

BLAST of CsaV3_6G002070 vs. ExPASy TrEMBL
Match: A0A5D3C2A2 (Superoxide dismutase 1 copper chaperone OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001360 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.1e-30
Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 60
          VVELKVFLHC+ECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT
Sbjct: 3  VVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 62

Query: 61 AIPWQDDELNNI 73
          A+PWQDDELNNI
Sbjct: 63 AVPWQDDELNNI 74

[Close]

BLAST of CsaV3_6G002070 vs. ExPASy TrEMBL
Match: A0A1S3C423 (superoxide dismutase 1 copper chaperone OS=Cucumis melo OX=3656 GN=LOC103496596 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 2.1e-30
Identity = 70/72 (97.22%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 60
          VVELKVFLHC+ECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT
Sbjct: 4  VVELKVFLHCDECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 63

Query: 61 AIPWQDDELNNI 73
          A+PWQDDELNNI
Sbjct: 64 AVPWQDDELNNI 75

[Close]

BLAST of CsaV3_6G002070 vs. ExPASy TrEMBL
Match: A0A6J1BV52 (copper transport protein ATX1 OS=Momordica charantia OX=3673 GN=LOC111006024 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.4e-24
Identity = 60/71 (84.51%), Postives = 64/71 (90.14%), Query Frame = 0


Query: 1   VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 60
           VVELKV LHCE+CIKKILKAIKKIQDIETYNVD ++NKV VTGNVT EEVIKVL KI KT
Sbjct: 44  VVELKVGLHCEDCIKKILKAIKKIQDIETYNVDTQLNKVTVTGNVTTEEVIKVLHKISKT 103

Query: 61  AIPWQDDELNN 72
           AIPWQ DE+NN
Sbjct: 104 AIPWQADEVNN 114

[Close]

BLAST of CsaV3_6G002070 vs. ExPASy TrEMBL
Match: A0A2C9VMM9 (HMA domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_07G136400 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.3e-21
Identity = 55/71 (77.46%), Postives = 63/71 (88.73%), Query Frame = 0


Query: 1  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 60
          VVELKV LHC+ECIKKILKA+KKIQDIETYNVD+E+NKVIVTGNVT EEVI+V+QKI KT
Sbjct: 4  VVELKVGLHCDECIKKILKAVKKIQDIETYNVDIELNKVIVTGNVTTEEVIRVIQKIGKT 63

Query: 61 AIPWQDDELNN 72
          A  W  D+ N+
Sbjct: 64 ATAWDGDQTNS 74

[Close]

BLAST of CsaV3_6G002070 vs. TAIR 10
Match: AT5G05365.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 6.0e-22
Identity = 48/67 (71.64%), Postives = 58/67 (86.57%), Query Frame = 0


Query: 1  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 60
          VVELKV LHC+ECI+KILKAIKKI+DIE Y+VD ++NKV VTGNVT E+VI+VLQK+RK 
Sbjct: 4  VVELKVNLHCDECIRKILKAIKKIEDIEAYDVDTQLNKVTVTGNVTEEQVIRVLQKVRKA 63

Query: 61 AIPWQDD 68
          A+ W  D
Sbjct: 64 AVKWDQD 70

[Close]

BLAST of CsaV3_6G002070 vs. TAIR 10
Match: AT5G27690.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 56.2 bits (134), Expect = 1.3e-08
Identity = 30/70 (42.86%), Postives = 41/70 (58.57%), Query Frame = 0


Query: 4   LKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKTAIP 63
           L+V +HCE C +KI K + KI  + T N+D++  KV V GNV  E +IK + K  + A  
Sbjct: 34  LRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRHAEL 93

Query: 64  WQDDELNNIN 74
           W     NNIN
Sbjct: 94  WPTSMENNIN 103

[Close]

BLAST of CsaV3_6G002070 vs. TAIR 10
Match: AT3G56891.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 55.1 bits (131), Expect = 2.9e-08
Identity = 26/64 (40.62%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 1  VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 60
          +VEL V + C+ C KK+ +AI K+  ++T  +D++  KV VTG V  EEV+K++++  +T
Sbjct: 17 IVELLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRT 76

Query: 61 AIPW 65
          A  W
Sbjct: 77 AEYW 80

[Close]

BLAST of CsaV3_6G002070 vs. TAIR 10
Match: AT3G24450.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 7.1e-07
Identity = 23/62 (37.10%), Postives = 39/62 (62.90%), Query Frame = 0


Query: 1   VVELKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKT 60
           +VELKV +HC  C KK+ K I K+  +  Y V++E  KV+V GN+   +V++ + K++  
Sbjct: 75  IVELKVSMHCYGCAKKVEKHISKLDGVTWYKVELESKKVVVKGNILPVDVLESICKVKNA 134

Query: 61  AI 63
            +
Sbjct: 135 QL 136

[Close]

BLAST of CsaV3_6G002070 vs. TAIR 10
Match: AT5G19090.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 49.3 bits (116), Expect = 1.6e-06
Identity = 26/61 (42.62%), Postives = 38/61 (62.30%), Query Frame = 0


Query: 4  LKVFLHCEECIKKILKAIKKIQDIETYNVDMEMNKVIVTGNVTNEEVIKVLQKIRKTAIP 63
          LKV +HC+ C +K+ K ++KI+ + T  +D E+ KV V+GNV    +IK L K  K A  
Sbjct: 14 LKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGKHAEI 73

Query: 64 W 65
          W
Sbjct: 74 W 74

The following BLAST results are available for this feature:

BLAST of CsaV3_6G002070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138408.1	4.6e-32	100.00	protein SODIUM POTASSIUM ROOT DEFECTIVE 2 [Cucumis sativus]	[more]
KAE8646572.1	4.6e-32	100.00	hypothetical protein Csa_004951, partial [Cucumis sativus]	[more]
KAA0052042.1	4.3e-30	97.22	superoxide dismutase 1 copper chaperone [Cucumis melo var. makuwa] >TYK04519.1 s...	[more]
XP_008456748.1	4.3e-30	97.22	PREDICTED: superoxide dismutase 1 copper chaperone [Cucumis melo]	[more]
XP_038884077.1	3.1e-28	94.52	copper transport protein ATX1 [Benincasa hispida]	[more]

BLAST of CsaV3_6G002070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84J88	1.8e-07	42.86	Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX...	[more]
B3H6D0	4.0e-07	40.63	Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX...	[more]
F4JZL7	2.2e-05	42.62	Heavy metal-associated isoprenylated plant protein 33 OS=Arabidopsis thaliana OX...	[more]
Q9M8K5	3.8e-05	39.71	Heavy metal-associated isoprenylated plant protein 32 OS=Arabidopsis thaliana OX...	[more]
Q9SJL2	4.9e-05	42.19	Heavy metal-associated isoprenylated plant protein 5 OS=Arabidopsis thaliana OX=...	[more]

BLAST of CsaV3_6G002070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8N1	2.2e-32	100.00	HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G013360 PE=4 SV...	[more]
A0A5D3C2A2	2.1e-30	97.22	Superoxide dismutase 1 copper chaperone OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3C423	2.1e-30	97.22	superoxide dismutase 1 copper chaperone OS=Cucumis melo OX=3656 GN=LOC103496596 ...	[more]
A0A6J1BV52	8.4e-24	84.51	copper transport protein ATX1 OS=Momordica charantia OX=3673 GN=LOC111006024 PE=...	[more]
A0A2C9VMM9	1.3e-21	77.46	HMA domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_07G136400 PE...	[more]

BLAST of CsaV3_6G002070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05365.1	6.0e-22	71.64	Heavy metal transport/detoxification superfamily protein	[more]
AT5G27690.1	1.3e-08	42.86	Heavy metal transport/detoxification superfamily protein	[more]
AT3G56891.1	2.9e-08	40.63	Heavy metal transport/detoxification superfamily protein	[more]
AT3G24450.1	7.1e-07	37.10	Heavy metal transport/detoxification superfamily protein	[more]
AT5G19090.1	1.6e-06	42.62	Heavy metal transport/detoxification superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 5..60 e-value: 1.5E-12 score: 47.7
IPR006121	Heavy metal-associated domain, HMA	PROSITE	PS50846	HMA_2	coord: 8..63 score: 9.002043
None	No IPR available	GENE3D	3.30.70.100		coord: 1..62 e-value: 4.1E-15 score: 57.8
None	No IPR available	PANTHER	PTHR22814:SF304	HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN	coord: 1..68
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 1..68
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 4..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G002070.1	CsaV3_6G002070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding