CsaV3_6G001700 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G001700
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 1139795 .. 1140109 (-)
RNA-Seq ExpressionCsaV3_6G001700
SyntenyCsaV3_6G001700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGTGGTGAGCCGTTTGGCACCGGCGGTGGTGTATGATGTGTCCGCGTGTGAGACGACAAGTGGGCTTCATTTTCAGTTGGCGGACCACGTGATTACCATGCCACGTGTGGGGAACCTAACATGCGTGATTTGTGAATGTGATTAGTTAGTTGGAGGGAAGAAGGCGAAAATTAACAAAAGAGAAAAGTATTATTTGATGTAGGAAGGATCCGAGTCAGAGATGAATGGAGGTAGAAACTTTCTGGATTCCAAGTCAGCAGTAATGGCGAATAGGGGATTGACAGGTGGTTTTAGTGGGTGTAATATTTAA

mRNA sequence

ATGATCGTGGTGAGCCGTTTGGCACCGGCGGTGGTGTATGATGTGTCCGCGTGTGAGACGACAAGTGGGCTTCATTTTCAGTTGGCGGACCACGAAGGATCCGAGTCAGAGATGAATGGAGGTAGAAACTTTCTGGATTCCAAGTCAGCAGTAATGGCGAATAGGGGATTGACAGGTGGTTTTAGTGGGTGTAATATTTAA

Coding sequence (CDS)

ATGATCGTGGTGAGCCGTTTGGCACCGGCGGTGGTGTATGATGTGTCCGCGTGTGAGACGACAAGTGGGCTTCATTTTCAGTTGGCGGACCACGAAGGATCCGAGTCAGAGATGAATGGAGGTAGAAACTTTCTGGATTCCAAGTCAGCAGTAATGGCGAATAGGGGATTGACAGGTGGTTTTAGTGGGTGTAATATTTAA

Protein sequence

MIVVSRLAPAVVYDVSACETTSGLHFQLADHEGSESEMNGGRNFLDSKSAVMANRGLTGGFSGCNI*
Homology
[Close]
BLAST of CsaV3_6G001700 vs. NCBI nr
Match: KGN45777.1 (hypothetical protein Csa_005691 [Cucumis sativus])

HSP 1 Score: 132.5 bits (332), Expect = 1.4e-27
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MIVVSRLAPAVVYDVSACETTSGLHFQLADHEGSESEMNGGRNFLDSKSAVMANRGLTGG 60
          MIVVSRLAPAVVYDVSACETTSGLHFQLADHEGSESEMNGGRNFLDSKSAVMANRGLTGG
Sbjct: 1  MIVVSRLAPAVVYDVSACETTSGLHFQLADHEGSESEMNGGRNFLDSKSAVMANRGLTGG 60

Query: 61 FSGCNI 67
          FSGCNI
Sbjct: 61 FSGCNI 66

[Close]
BLAST of CsaV3_6G001700 vs. ExPASy TrEMBL
Match: A0A0A0KBK7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G011030 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.6e-28
Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0 

Query: 1  MIVVSRLAPAVVYDVSACETTSGLHFQLADHEGSESEMNGGRNFLDSKSAVMANRGLTGG 60
          MIVVSRLAPAVVYDVSACETTSGLHFQLADHEGSESEMNGGRNFLDSKSAVMANRGLTGG
Sbjct: 1  MIVVSRLAPAVVYDVSACETTSGLHFQLADHEGSESEMNGGRNFLDSKSAVMANRGLTGG 60

Query: 61 FSGCNI 67
          FSGCNI
Sbjct: 61 FSGCNI 66

The following BLAST results are available for this feature:
BLAST of CsaV3_6G001700 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45777.11.4e-27100.00hypothetical protein Csa_005691 [Cucumis sativus][more]
BLAST of CsaV3_6G001700 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G001700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBK76.6e-28100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G011030 PE=4 SV=1[more]
BLAST of CsaV3_6G001700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G001700.1CsaV3_6G001700.1mRNA