CsaV3_6G001480 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G001480
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Maternal effect embryo arrest
Location	chr6: 957944 .. 958695 (-)
RNA-Seq Expression	CsaV3_6G001480
Synteny	CsaV3_6G001480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGACCGGCACCAGTATTCACATATCAGCCCTTGACGGCATCGTTAATGTCAATTCCATGTTCACTCTTGCCGTCTTCTTAGGTCTGGCGTGGAACCCCAACGATCCAATGAATAACCTAATCCAAAGCCCTAATTGTTTGGCTGGCCCTTCCGTCGCCGCGAATCTCGTTTCCTTCCATGTCTATTCCTTCAGCTCCTTCCTCTTTTCCAGCTTAATCGCTCTCGGTCTCAAGCAAGCCATTAGGATCGCCAAAAGCCCATTCTATCACCCGACTGAGTTCTTCATTCGTGTCAACAAAACGGCGCTCCGAATCGGGATGTTGGTGTCGGGAATCGGGTCGGTTTGTGGGTGTGGATTCCTTATGATGGCGCTTATCAATGTTGTTCAGATCAAACTTGGTACTCTGAGCTGCGGCAGCTCTCAGACATTCGCGGCGGTGGTTCCACTCGTAATTTTGGTTCCGATTGCACTTGTGGTTTACATCTGCCTTGTTTCTTACGCTTTTATCAATTAGAGATATTGCGTGTTTCCATGAGTATATGCCAATTCTAGATTTCCATTTTACGTTGCTTGTGGGATACCATTATCGGATAAACTCTGATTCTAACTTCAATTTTACTGATTTAGATATGGTTATCATCAACCTTCTTGTTGGGAACTGTATTCGATTACATTGAATTGCTCCAGATCTTAACATTATTACTTGTCTGTTCTACCTGCGAGCTTTCTTTTTCTCATATTGGCTAA

mRNA sequence

ATGCCGACCGGCACCAGTATTCACATATCAGCCCTTGACGGCATCGTTAATGTCAATTCCATGTTCACTCTTGCCGTCTTCTTAGGTCTGGCGTGGAACCCCAACGATCCAATGAATAACCTAATCCAAAGCCCTAATTGTTTGGCTGGCCCTTCCGTCGCCGCGAATCTCGTTTCCTTCCATGTCTATTCCTTCAGCTCCTTCCTCTTTTCCAGCTTAATCGCTCTCGGTCTCAAGCAAGCCATTAGGATCGCCAAAAGCCCATTCTATCACCCGACTGAGTTCTTCATTCGTGTCAACAAAACGGCGCTCCGAATCGGGATGTTGGTGTCGGGAATCGGGTCGGTTTGTGGGTGTGGATTCCTTATGATGGCGCTTATCAATGTTGTTCAGATCAAACTTGGTACTCTGAGCTGCGGCAGCTCTCAGACATTCGCGGCGGTGGTTCCACTCATATGGTTATCATCAACCTTCTTGTTGGGAACTGTATTCGATTACATTGAATTGCTCCAGATCTTAACATTATTACTTGTCTGTTCTACCTGCGAGCTTTCTTTTTCTCATATTGGCTAA

Coding sequence (CDS)

ATGCCGACCGGCACCAGTATTCACATATCAGCCCTTGACGGCATCGTTAATGTCAATTCCATGTTCACTCTTGCCGTCTTCTTAGGTCTGGCGTGGAACCCCAACGATCCAATGAATAACCTAATCCAAAGCCCTAATTGTTTGGCTGGCCCTTCCGTCGCCGCGAATCTCGTTTCCTTCCATGTCTATTCCTTCAGCTCCTTCCTCTTTTCCAGCTTAATCGCTCTCGGTCTCAAGCAAGCCATTAGGATCGCCAAAAGCCCATTCTATCACCCGACTGAGTTCTTCATTCGTGTCAACAAAACGGCGCTCCGAATCGGGATGTTGGTGTCGGGAATCGGGTCGGTTTGTGGGTGTGGATTCCTTATGATGGCGCTTATCAATGTTGTTCAGATCAAACTTGGTACTCTGAGCTGCGGCAGCTCTCAGACATTCGCGGCGGTGGTTCCACTCATATGGTTATCATCAACCTTCTTGTTGGGAACTGTATTCGATTACATTGAATTGCTCCAGATCTTAACATTATTACTTGTCTGTTCTACCTGCGAGCTTTCTTTTTCTCATATTGGCTAA

Protein sequence

MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSFHVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLIWLSSTFLLGTVFDYIELLQILTLLLVCSTCELSFSHIG*

Homology

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BLAST of CsaV3_6G001480 vs. NCBI nr
Match: KGN45754.2 (hypothetical protein Csa_005400 [Cucumis sativus])

HSP 1 Score: 369.8 bits (948), Expect = 1.4e-98
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF 60
           MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF
Sbjct: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLIWLSSTFLLGTVFDYIELLQILTLLLVCS 180
           FLMMALINVVQIKLGTLSCGSSQTFAAVVPLIWLSSTFLLGTVFDYIELLQILTLLLVCS
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLIWLSSTFLLGTVFDYIELLQILTLLLVCS 180

Query: 181 TCELSFSHIG 191
           TCELSFSHIG
Sbjct: 181 TCELSFSHIG 190

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BLAST of CsaV3_6G001480 vs. NCBI nr
Match: XP_004138443.1 (uncharacterized protein LOC101208865 [Cucumis sativus])

HSP 1 Score: 297.7 bits (761), Expect = 7.0e-77
Identity = 152/154 (98.70%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF 60
           MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF
Sbjct: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLIWL 155
           FLMMALINVVQIKLGTLSCGSSQTFAAVVPL+ L
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVIL 154

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BLAST of CsaV3_6G001480 vs. NCBI nr
Match: XP_008441411.1 (PREDICTED: uncharacterized protein LOC103485537 [Cucumis melo] >KAA0041472.1 uncharacterized protein E6C27_scaffold6G00540 [Cucumis melo var. makuwa] >TYK24346.1 uncharacterized protein E5676_scaffold205G001250 [Cucumis melo var. makuwa])

HSP 1 Score: 291.2 bits (744), Expect = 6.5e-75
Identity = 148/154 (96.10%), Postives = 152/154 (98.70%), Query Frame = 0


Query: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF 60
           MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSP+CLAGPSVAANLV+F
Sbjct: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPSCLAGPSVAANLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRI+KSPFYHPTEF IRVNKTALRIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFLIRVNKTALRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLIWL 155
           FLMMALINVVQIKLGTLSCGSSQTFAAVVPL+ L
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVIL 154

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BLAST of CsaV3_6G001480 vs. NCBI nr
Match: XP_038885575.1 (uncharacterized protein LOC120075905 [Benincasa hispida])

HSP 1 Score: 287.3 bits (734), Expect = 9.4e-74
Identity = 144/154 (93.51%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF 60
           MP GTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDP NNLIQSPNCLAGPSVAANLV+F
Sbjct: 1   MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLIQSPNCLAGPSVAANLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRI+KSPFYHPTEFF+RVNKTA+R+GMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRVGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLIWL 155
           FLMMALINVVQIKLG LSCGSSQTFAAVVPL+ L
Sbjct: 121 FLMMALINVVQIKLGVLSCGSSQTFAAVVPLVIL 154

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BLAST of CsaV3_6G001480 vs. NCBI nr
Match: XP_022134461.1 (uncharacterized protein LOC111006700 [Momordica charantia])

HSP 1 Score: 282.7 bits (722), Expect = 2.3e-72
Identity = 140/154 (90.91%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF 60
           MP GTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDP NNL+Q+PNCLA PS+A NLV+F
Sbjct: 54  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAF 113

Query: 61  HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRI+KSPFYHPTEFF+RVNK+ALRIGML+SGIGSVCGCG
Sbjct: 114 HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCG 173

Query: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLIWL 155
           FLMMALINVVQIKLGTLSCGSSQTFAAVVPL+ L
Sbjct: 174 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVIL 207

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BLAST of CsaV3_6G001480 vs. ExPASy TrEMBL
Match: A0A0A0KA88 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008850 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 3.4e-77
Identity = 152/154 (98.70%), Postives = 153/154 (99.35%), Query Frame = 0


Query: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF 60
           MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF
Sbjct: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLIWL 155
           FLMMALINVVQIKLGTLSCGSSQTFAAVVPL+ L
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVIL 154

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BLAST of CsaV3_6G001480 vs. ExPASy TrEMBL
Match: A0A5D3DL39 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001250 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.2e-75
Identity = 148/154 (96.10%), Postives = 152/154 (98.70%), Query Frame = 0


Query: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF 60
           MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSP+CLAGPSVAANLV+F
Sbjct: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPSCLAGPSVAANLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRI+KSPFYHPTEF IRVNKTALRIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFLIRVNKTALRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLIWL 155
           FLMMALINVVQIKLGTLSCGSSQTFAAVVPL+ L
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVIL 154

[Close]

BLAST of CsaV3_6G001480 vs. ExPASy TrEMBL
Match: A0A1S3B446 (uncharacterized protein LOC103485537 OS=Cucumis melo OX=3656 GN=LOC103485537 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.2e-75
Identity = 148/154 (96.10%), Postives = 152/154 (98.70%), Query Frame = 0


Query: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF 60
           MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSP+CLAGPSVAANLV+F
Sbjct: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPSCLAGPSVAANLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRI+KSPFYHPTEF IRVNKTALRIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFLIRVNKTALRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLIWL 155
           FLMMALINVVQIKLGTLSCGSSQTFAAVVPL+ L
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVIL 154

[Close]

BLAST of CsaV3_6G001480 vs. ExPASy TrEMBL
Match: A0A6J1BXU9 (uncharacterized protein LOC111006700 OS=Momordica charantia OX=3673 GN=LOC111006700 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.1e-72
Identity = 140/154 (90.91%), Postives = 149/154 (96.75%), Query Frame = 0


Query: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF 60
           MP GTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDP NNL+Q+PNCLA PS+A NLV+F
Sbjct: 54  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAF 113

Query: 61  HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRI+KSPFYHPTEFF+RVNK+ALRIGML+SGIGSVCGCG
Sbjct: 114 HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCG 173

Query: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLIWL 155
           FLMMALINVVQIKLGTLSCGSSQTFAAVVPL+ L
Sbjct: 174 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVIL 207

[Close]

BLAST of CsaV3_6G001480 vs. ExPASy TrEMBL
Match: A0A6J1JSD7 (uncharacterized protein LOC111487406 OS=Cucurbita maxima OX=3661 GN=LOC111487406 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 7.3e-72
Identity = 138/154 (89.61%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF 60
           MPTGT+IH+SALDGIVNVNSMFTLAVFLGLAWNPNDP NNL++SPNCLA P+VA NLV+F
Sbjct: 1   MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRI+K+PFYHPTEFF+RVNKTA+RIGMLVSGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLIWL 155
           FLMMALINVVQIKLGTLSCGSSQT+AAVVPL+ L
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVIL 154

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BLAST of CsaV3_6G001480 vs. TAIR 10
Match: AT5G05950.1 (maternal effect embryo arrest 60 )

HSP 1 Score: 202.6 bits (514), Expect = 2.8e-52
Identity = 111/173 (64.16%), Postives = 135/173 (78.03%), Query Frame = 0


Query: 5   TSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSFHVYS 64
           TSIHI+ALDGIVNVNS+FTLAVF+GLAWNP DP N+L+  PNC+    +A NLV+FHVYS
Sbjct: 3   TSIHITALDGIVNVNSLFTLAVFIGLAWNPTDPDNSLVTDPNCVPTARMAENLVAFHVYS 62

Query: 65  FSSFLFSSLIALGLKQAIRIAKSPFYH------PTEFFIRVNKTALRIGMLVSGIGSVCG 124
           F+SFLFSSLIALGLKQA+R+  +  +H      P  ++  VNKTALR GM+ SG+GSVCG
Sbjct: 63  FASFLFSSLIALGLKQAMRLNIASSFHISTRIDPVVYY--VNKTALRFGMVTSGLGSVCG 122

Query: 125 CGFLMMALINVVQIKLGTLSCGSS-QTFAAVVPLIWLSSTFLLGTVFDYIELL 171
           CGFLM+ALINVVQIKLGTL CG+S  T+AAVVPL+ L  + L    F Y+ L+
Sbjct: 123 CGFLMLALINVVQIKLGTLGCGASGHTYAAVVPLVILVPSAL----FIYVSLM 169

[Close]

BLAST of CsaV3_6G001480 vs. TAIR 10
Match: AT3G07510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 131.0 bits (328), Expect = 1.0e-30
Identity = 77/156 (49.36%), Postives = 103/156 (66.03%), Query Frame = 0


Query: 5   TSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSFHVYS 64
           TS+H+SALDG+VNVNS+FT+AVF+GL+       ++L Q  +C A   VA  L+ F V S
Sbjct: 24  TSVHVSALDGLVNVNSLFTIAVFVGLSL-ATPGQHSLEQRSSCDASADVAKKLLVFEVVS 83

Query: 65  FSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCGFLMM 124
           FS FLFSSL+A GLK A+ +  S   +   F   +N   LR GM+ S +GSV GC FLM+
Sbjct: 84  FSFFLFSSLVAQGLKLALNLLNSKDVNEI-FRAHINIKVLRWGMMASAVGSVMGCLFLML 143

Query: 125 ALINVVQIKLGTLSCGSSQTFAAVVPLIWLSSTFLL 161
           +++NV+QI+LG LSCGS     AV  L+ L S+ LL
Sbjct: 144 SMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALL 177

[Close]

BLAST of CsaV3_6G001480 vs. TAIR 10
Match: AT3G07510.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 131.0 bits (328), Expect = 1.0e-30
Identity = 77/156 (49.36%), Postives = 103/156 (66.03%), Query Frame = 0


Query: 5   TSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSFHVYS 64
           TS+H+SALDG+VNVNS+FT+AVF+GL+       ++L Q  +C A   VA  L+ F V S
Sbjct: 24  TSVHVSALDGLVNVNSLFTIAVFVGLSL-ATPGQHSLEQRSSCDASADVAKKLLVFEVVS 83

Query: 65  FSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCGFLMM 124
           FS FLFSSL+A GLK A+ +  S   +   F   +N   LR GM+ S +GSV GC FLM+
Sbjct: 84  FSFFLFSSLVAQGLKLALNLLNSKDVNEI-FRAHINIKVLRWGMMASAVGSVMGCLFLML 143

Query: 125 ALINVVQIKLGTLSCGSSQTFAAVVPLIWLSSTFLL 161
           +++NV+QI+LG LSCGS     AV  L+ L S+ LL
Sbjct: 144 SMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALL 177

[Close]

BLAST of CsaV3_6G001480 vs. TAIR 10
Match: AT3G46890.1 (BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 125.6 bits (314), Expect = 4.4e-29
Identity = 86/184 (46.74%), Postives = 114/184 (61.96%), Query Frame = 0


Query: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPM--------NNLIQSPNCLAGPS 60
           +PT T IH++A+DGIVNVNS+F+LA+FLGL  + N           N+ ++      GP+
Sbjct: 16  LPT-TLIHVTAIDGIVNVNSLFSLALFLGLTTSGNITFPVSSSASENHHLRRCISAKGPA 75

Query: 61  VAANLVSFHVYSFSSFLFSSLIALGLKQAIRIA-----------KSPFYHPTEFFIRVNK 120
           +A  LVS HVYSFS FLFSSLIA+ LKQAIR             ++   +  E   RVN 
Sbjct: 76  LAERLVSSHVYSFSLFLFSSLIAMSLKQAIRTTTTTTNGNCLEEEARVLNAGEG--RVNL 135

Query: 121 TALRIGMLVSGIGSVCGCGFLMMALINVVQIKLGTLSCGSS-QTFAAVVPLIWLSSTFLL 165
            ALR+G++ S + SV GCGFL MAL+++VQIKLG L C  S    AA+VPL+ L  + L+
Sbjct: 136 AALRVGIVASCVASVLGCGFLTMALVDLVQIKLGPLECKRSFHALAAIVPLVVLVPSALI 195

[Close]

BLAST of CsaV3_6G001480 vs. TAIR 10
Match: AT2G01580.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits to 129 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 114.4 bits (285), Expect = 1.0e-25
Identity = 67/161 (41.61%), Postives = 105/161 (65.22%), Query Frame = 0


Query: 5   TSIHISALDGIVNVNSMFTLAVFLGLAWN-PNDPMNNLIQSPNCLAGPSVAANLVSFHVY 64
           TS+H++ALDGIV+ NS+FT+AVF+G++++ P+D    L     C AG  V  +LV F V 
Sbjct: 26  TSVHVTALDGIVSANSLFTVAVFVGISFDQPSD--LTLTDRTECSAGRDVERDLVVFEVI 85

Query: 65  SFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCGFLM 124
           SF+ FLFSSL+A G+K AI +  S       F   +N+  LR G++ +  GS+ GC FL+
Sbjct: 86  SFAFFLFSSLVAQGMKLAINLLNSKETDEV-FKANINRDVLRFGVVGAAGGSILGCVFLL 145

Query: 125 MALINVVQIKLGTLSCGSSQTFAAVVPLIWLSSTFLLGTVF 165
           +++++V+Q++LG LSCG++     V+ L+ L S+ L   +F
Sbjct: 146 LSIVDVIQLRLGLLSCGNALAIHTVLVLVVLVSSALSVYIF 183

The following BLAST results are available for this feature:

BLAST of CsaV3_6G001480 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN45754.2	1.4e-98	100.00	hypothetical protein Csa_005400 [Cucumis sativus]	[more]
XP_004138443.1	7.0e-77	98.70	uncharacterized protein LOC101208865 [Cucumis sativus]	[more]
XP_008441411.1	6.5e-75	96.10	PREDICTED: uncharacterized protein LOC103485537 [Cucumis melo] >KAA0041472.1 unc...	[more]
XP_038885575.1	9.4e-74	93.51	uncharacterized protein LOC120075905 [Benincasa hispida]	[more]
XP_022134461.1	2.3e-72	90.91	uncharacterized protein LOC111006700 [Momordica charantia]	[more]

BLAST of CsaV3_6G001480 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G001480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA88	3.4e-77	98.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008850 PE=4 SV=1	[more]
A0A5D3DL39	3.2e-75	96.10	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B446	3.2e-75	96.10	uncharacterized protein LOC103485537 OS=Cucumis melo OX=3656 GN=LOC103485537 PE=...	[more]
A0A6J1BXU9	1.1e-72	90.91	uncharacterized protein LOC111006700 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1JSD7	7.3e-72	89.61	uncharacterized protein LOC111487406 OS=Cucurbita maxima OX=3661 GN=LOC111487406...	[more]

BLAST of CsaV3_6G001480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05950.1	2.8e-52	64.16	maternal effect embryo arrest 60	[more]
AT3G07510.1	1.0e-30	49.36	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G07510.2	1.0e-30	49.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G46890.1	4.4e-29	46.74	BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TA...	[more]
AT2G01580.1	1.0e-25	41.61	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33430:SF7	OS07G0240400 PROTEIN	coord: 3..160
None	No IPR available	PANTHER	PTHR33430	MATERNAL EFFECT EMBRYO ARREST PROTEIN	coord: 3..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G001480.1	CsaV3_6G001480.1	mRNA