CsaV3_6G001440 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G001440
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	GRF1-interacting factor 3-like
Location	chr6: 939069 .. 943831 (-)
RNA-Seq Expression	CsaV3_6G001440
Synteny	CsaV3_6G001440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTACCTATTAAGACAGAATAATCTCATACAAACAACTATAATAATGATTCATGGTAAGAACATATCTTCAACCTAGAAATGATTATATAAAGATTTTAAATAAATTTTAACAACTTGGAAGTAGAGGATGTATAATAAATACGAAGGTATGTACTGTGAGTAGAGGTGCATTTACTAGCAAACCGATTAGAAAATCAATGATTATAACAATTCCACTCATTAGATGTATACTTGTAGTGCAACATAAATACATATACACAGGTTCATCTAACTAGTTAATGTGATAGATATGATGATTGAGTCTAACTATTATCAACGTTGTAAGAGAATCATTCTTTACCTTCTCTTATATTTGCTTAGTCGAAAAATGGTACTGTTATTGAGAAAAAAAAAAGAAAAGAATAAAATAAATGCCTAAATGGTATTGGGTCGGGCCCAAGTGATAGTTGAAACAGTGAGAGCAAATCAAATCTAGTCGTCGTCTTGAGTTTGGTGAAACAACAAACTCCATATGCAAAATCAAAAACTCCTTTTTTTTTTTTTTTTTTCTTTTCATTCTTTCAATTATTAATTTTATTATTTAATCTTCTTCTTATCCTCTCTTCACTTTTCTTCATTTATTTCTCTGCCATTTTTCTTCATTAATCTTTCTTTTTGATGCCATATCCTTTAAATTATTTTAACTCTGACCATATTATTTTGATAATTTATTAATCTCATATTCTGTAAGGTAATTTTATTTTCATCAAATGTAAGTGTGAGAGAGTAAAAAATGAATGAAATGAAGGCTTTGTTTGTACCAAACCAATATATATATTTTCTTTTCTTGAAATGAACAAAAACCTGCATTCTAATTTCTAATTTCTATATTCCTTTTGGCCTTTTCTTATATTTTGTTGTTCTCCGTACGCAGCACTGATTGAACTCTTCTTCTTCTTTTTTTCTTTCTAAACCCTATTTCACGTTCAGTCAGTCGTCTCTTTTCCTCCCGTTATCAGCACCCCCGTCCGCCGCCCGTCGCAACCTGCACGCCGTCGTTGAAGCTCCCGTAGTCTCAGCCTTTCCACGGAGTCGTAGCCGCCACCTTCCTCTCATACTCTCTTGACTTTCACCTATCAGACTTATCTCCGTTCATTTTTGTCCCGAACACTGCGGTTCAGCCCCCAAACCGCGCCGTTTGTGAGATCGCGCGACCGCTGCTTGTTTTTCAGATCCCAAGGTTTTATTTTCTGTTTTTGTTTTGTTTTTCTGGGTTATGTTGGTGGTCTATTCTCTTTCACTCACGGAAAATAAAATCACGAACAATTTTTTGTTGTTGTTGTTGATGATGATGATTTCTTTTCCAATAGATGTTCTACTAACCTAAATGAAAATATAATACTAAGAATGTATATCTTACAGATTAGAGAAAAAGATAATGAATAAAAATGAACAAAACATATCATTCTTATCAACAAAATAGAAAATTAATATTAGGTTCGAGTTTGATTGAACTGTCGATGGGTTTGAAATATCATAGGGAGACGATTGCATATGAATTGGCTGGATATAAATAAAAAATAAAACGCTTATGGGGTAGAGCTAGAAACAGATTTTGACCGATTCAGGGGTTCCAAACAGGGGGTACAACCTCAGAAATCTATTTTAATGTAGCAGATTCTCTTTCTTCTTGCTTTTGGGTCTTCCTTTATCTTCTCAATCTCTTCTGATTTGGGAAATTACTTTTCTGAGAGGTAGGGCTAAGGTTCACATTCAGGAAAGCCAAAGATGCAGCAACCACCGCAAATGATGCCCATGATGCCTTCATTTCCCCCCACCAATATCACCACCGAGCAGATACAAAAGGCACGCTCTGTCTATTTCTTCTTTACTTCTTACTCAAACGTCTTTTTTCTTTTTTTCATATGGTATTGAAGTGACTGCTCCCTTCGGTGGTGCGTTTGATTTCATGAAACTTTGTTATGACATTGGATGTGATTTTGAAAGAAACATGCTTTTATGCTTGATAAGTTAATAGCTTCAACATGAAAATTAATGACCAAATGTTTGCTGATGGAAAGAACCAAATAAAGCAGGCCTTTGGGAATTAATGCGATTCATAAAAAGAACAATGTTGAATTGGAGTTTTTGATTAAGAATTGAAAATGATAAGGTAGTGTTCTGTTGGAAACATGTTTCGAGGACTAATGTGCTGGACTGATGGTGCAAATTTGATATTGGAGCTGGGTAATGCTGTGTTTTATTAAAATTTTGTGGATTTTTCCTTTTGTTTCAATTGTGGATTGGAGAGCTTTTCATCACATTTGCTTCCTCTTTTGCATAAGATTTGAACTTCTTTTTATGTTCATTTTGTCTCTGGATGTTTGAAGTGTAGGTGTTTATTAAAATTAACTAATATGAATTTAGATTTAGCTGCTCCACAATAGATCCTTGTTAAGACATTTGAGTTGAAGTTATCAACAATGAATGGTTTCAACTGCATGCAGTATCTTGATGAGAACAAAAAGTTGATATTGGCCATACTGGACAACCAAAATCTGGGGAAACTAGCTGAATGTGCTCAGTAAGTTACCCCTCTCTCTACACATTGTTGTGCGTGGTGTTGATTCTTGAAATGTTACATCCCAACACCAATGGAGCCCACAAAGTTGCATTGATTATTATCTTTTTTCCTGTGTTTCTCATAATCTATAATCCTACTCCTAATAACGTAGGATTTTTAGGATGTGAAGAAGTCTAGAGAGAAGGTTTAACACTTCTGTTTGGGAGTTCGTCACTGGACAATTTTGTAATTATAACATTTATCTTGTTCTTTTGGACTAAAATCCTTTGTTTGGTAAGTGTTGGATTCCTGTTTTTGGGGACATGTTTTTTGTGCTTCTTGCACCCTTGCATTTTTTCAATGAAAGTTCAGCTTCTTACCCAAATAATAATAATAATAATAATAATTTACCATGCATGTTATTTAAAAGTAAGGATGGTGTATCTTGGTGTTTAAGAGCTGGAGGTGTCTATGGGTGCAGTTTAAATCTTGCTACTAATTATGTGTTTTCATTTTCGAGCATTTCTCATGTCTTTGTAATTTGAGCAATAGTCGCTTTTCATGAAAAGTGTTGTTGCCATTTAAAAATAAAATAAAATAAGGATGTGGACTTATTATGGACTTCTGTTCTTTATAATTGGGTATGTATTTCGGAATTGATACAATGTATTGTTTTTGTGAATATCTGGAGTCAAGGGTTACATAATCTACATCCTTTGCTGTCTCTATGCGCTTGTGTGGTTTTATGAACTACTGAAGTGTTGCATTTCCTAAAACTATTTTTAATACGTGGCTTTAAATTTTCACAATATGATGCATTTTACTCAAGGACAATTTCATCCCTATGTACCTGTAGTGTACACAGTATTGTACCTGAGAGCTGAGAGTTAATTTGATTATTTAAATAGGTACCAAGCTCAACTTCAGAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCCCAGCCACAGGCACCGGCCATGCCTCCACAGGTTGGTTAATAACTAGGCCTCAGTTTCTGCTAATTTCATAACAAAATATAGTCTGTCTTACATATGTTGGAATGGTCAGATGGCTCCCCATCCTGCTATGCAGCAAGGGGGTTATTATATGCAACACCCTCAGGCAGCTATAATGGCTCAGCAATCGGGACTTTTCCCTCCAAAAGTTCCATTGCAGTTTGGCAACCCCCATCAATTACAAGATCCACAGCAGCAACTACACCAACAACACCAGCAAGCAATGCAAGGGCAAATGGGACTAAGACCTATTGGTGGTGCTAACAATGGCATGCACCACCCACATCACACTGAAAGTACCCTTGGAGGTGCTAGTGCTGGTGGCCCTCCTCGAAGTTCAGGGCAAACTGATGGTCGTGGAAGTGGCAAGCAAGACTCCGCTGATGTGGGGGGTGCAGGCACCGATGGTCAGGGAAGTGCAGCTGGTGGTCGGGGCGGTGGTGGTGATGGTGAGGAAGCTAAGTAACATAGCCTTATGGCTGGTTCCCACATCCATGTGTGGCTTGTTAATAGTAGGTGCTTCGTACAATAGAGCTTCCATGCTGTGGTGATATTAGTAGGTTGAGTAAAGAAAAACCAAAGTTCTCAATTGTTTTAGTTTATAAGCAGAATATTTAGGTAAGTTGTGTATGTGTTGTAAGAGTCTTGGTATGCAGTTAAACTCCATGCTTGGCAATATTAGGCAGATGTAGTTTGAAGAGAGTTAGTGGTAGACTGGTCTTGACCAGTACTTGCACTTTTATCTCATTTTGTAAACAACTTGGGAAAGATCAGTAGGATTAGTTATAATATAATTCTACTGGATGGTTTCTAGCAGTTGGCTCTTTATAACTGACCTCAAACTTTTGAATGCAAAGGAAAGTTGTCCAACAATGTTTGTTTGGAGTGGGTGCTTGTGGCAGGTGTCTACAAGCAAACCAAAGCACAATGGTTGTTAAATCCACAGGTTGAATTCATAAATGTTGTTTTTTTTGTACTGTGTACTTGATTTCAGCTTCTCTTTGAAGATTGAAGAGTGATGTTGATGAAATGATGAACTGACACTCCAAACATTGGGAGTCAATCACAATGATCTTACAATCATGAAAGAAAAAAGATTATAAATGTTCGGATTTGTATTATTGCAACTGTTTGCACGAATCCCAGCAACAGCCTTAGTACAAATTATGTGGACGCCTGGCTCTATCCATAAAATGGGAA

mRNA sequence

ATGCAGCAACCACCGCAAATGATGCCCATGATGCCTTCATTTCCCCCCACCAATATCACCACCGAGCAGATACAAAAGTATCTTGATGAGAACAAAAAGTTGATATTGGCCATACTGGACAACCAAAATCTGGGGAAACTAGCTGAATGTGCTCAGTACCAAGCTCAACTTCAGAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCCCAGCCACAGGCACCGGCCATGCCTCCACAGATGGCTCCCCATCCTGCTATGCAGCAAGGGGGTTATTATATGCAACACCCTCAGGCAGCTATAATGGCTCAGCAATCGGGACTTTTCCCTCCAAAAGTTCCATTGCAGTTTGGCAACCCCCATCAATTACAAGATCCACAGCAGCAACTACACCAACAACACCAGCAAGCAATGCAAGGGCAAATGGGACTAAGACCTATTGGTGGTGCTAACAATGGCATGCACCACCCACATCACACTGAAAGTACCCTTGGAGGTGCTAGTGCTGGTGGCCCTCCTCGAAGTTCAGGGCAAACTGATGGTCGTGGAAGTGGCAAGCAAGACTCCGCTGATGTGGGGGGTGCAGGCACCGATGGTCAGGGAAGTGCAGCTGGTGGTCGGGGCGGTGGTGGTGATGGTGAGGAAGCTAAGTAA

Coding sequence (CDS)

ATGCAGCAACCACCGCAAATGATGCCCATGATGCCTTCATTTCCCCCCACCAATATCACCACCGAGCAGATACAAAAGTATCTTGATGAGAACAAAAAGTTGATATTGGCCATACTGGACAACCAAAATCTGGGGAAACTAGCTGAATGTGCTCAGTACCAAGCTCAACTTCAGAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCCCAGCCACAGGCACCGGCCATGCCTCCACAGATGGCTCCCCATCCTGCTATGCAGCAAGGGGGTTATTATATGCAACACCCTCAGGCAGCTATAATGGCTCAGCAATCGGGACTTTTCCCTCCAAAAGTTCCATTGCAGTTTGGCAACCCCCATCAATTACAAGATCCACAGCAGCAACTACACCAACAACACCAGCAAGCAATGCAAGGGCAAATGGGACTAAGACCTATTGGTGGTGCTAACAATGGCATGCACCACCCACATCACACTGAAAGTACCCTTGGAGGTGCTAGTGCTGGTGGCCCTCCTCGAAGTTCAGGGCAAACTGATGGTCGTGGAAGTGGCAAGCAAGACTCCGCTGATGTGGGGGGTGCAGGCACCGATGGTCAGGGAAGTGCAGCTGGTGGTCGGGGCGGTGGTGGTGATGGTGAGGAAGCTAAGTAA

Protein sequence

MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRSSGQTDGRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK*

Homology

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BLAST of CsaV3_6G001440 vs. NCBI nr
Match: XP_004138447.1 (GRF1-interacting factor 3 [Cucumis sativus] >KGN45750.1 hypothetical protein Csa_005109 [Cucumis sativus])

HSP 1 Score: 410.6 bits (1054), Expect = 8.4e-111
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRSSGQTD 180
           HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRSSGQTD
Sbjct: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRSSGQTD 180

Query: 181 GRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK 218
           GRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK
Sbjct: 181 GRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK 217

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BLAST of CsaV3_6G001440 vs. NCBI nr
Match: XP_016899447.1 (PREDICTED: GRF1-interacting factor 3 isoform X2 [Cucumis melo])

HSP 1 Score: 407.1 bits (1045), Expect = 9.3e-110
Identity = 215/217 (99.08%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRSSGQTD 180
           HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLG ASAGGPPRSSGQTD
Sbjct: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGSASAGGPPRSSGQTD 180

Query: 181 GRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK 218
           GRGSGKQDSADVGGAGTDGQG+AAGGRGGGGDGEEAK
Sbjct: 181 GRGSGKQDSADVGGAGTDGQGNAAGGRGGGGDGEEAK 217

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BLAST of CsaV3_6G001440 vs. NCBI nr
Match: XP_016899446.1 (PREDICTED: GRF1-interacting factor 3 isoform X1 [Cucumis melo])

HSP 1 Score: 401.7 bits (1031), Expect = 3.9e-108
Identity = 215/220 (97.73%), Postives = 216/220 (98.18%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPP---QMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQF 120
           LMYLAAIADAQPQAPAMPP   QMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQF
Sbjct: 61  LMYLAAIADAQPQAPAMPPQNGQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQF 120

Query: 121 GNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRSSG 180
           GNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLG ASAGGPPRSSG
Sbjct: 121 GNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGSASAGGPPRSSG 180

Query: 181 QTDGRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK 218
           QTDGRGSGKQDSADVGGAGTDGQG+AAGGRGGGGDGEEAK
Sbjct: 181 QTDGRGSGKQDSADVGGAGTDGQGNAAGGRGGGGDGEEAK 220

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BLAST of CsaV3_6G001440 vs. NCBI nr
Match: XP_038885310.1 (GRF1-interacting factor 3-like [Benincasa hispida] >XP_038885311.1 GRF1-interacting factor 3-like [Benincasa hispida])

HSP 1 Score: 399.8 bits (1026), Expect = 1.5e-107
Identity = 211/217 (97.24%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRSSGQTD 180
           HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTL GA+AGGPPR SGQTD
Sbjct: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLVGATAGGPPRGSGQTD 180

Query: 181 GRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK 218
           GRG GKQDSADVGGAG DGQGS+AGGRGGGGDGEEAK
Sbjct: 181 GRGGGKQDSADVGGAGADGQGSSAGGRGGGGDGEEAK 217

[Close]

BLAST of CsaV3_6G001440 vs. NCBI nr
Match: XP_023550144.1 (GRF1-interacting factor 3-like [Cucurbita pepo subsp. pepo] >XP_023550145.1 GRF1-interacting factor 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 392.9 bits (1008), Expect = 1.8e-105
Identity = 207/217 (95.39%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPA+QQGGYYMQHPQAA+MAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAIQQGGYYMQHPQAAMMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRSSGQTD 180
           HQLQD QQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTE TLGGASAGGP RSSGQTD
Sbjct: 121 HQLQDQQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEGTLGGASAGGPARSSGQTD 180

Query: 181 GRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK 218
           GRG GKQDSADVGG G DGQG++AGGRGGGGDGEEAK
Sbjct: 181 GRGGGKQDSADVGGTGADGQGNSAGGRGGGGDGEEAK 217

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BLAST of CsaV3_6G001440 vs. ExPASy Swiss-Prot
Match: Q93VH6 (GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 9.2e-52
Identity = 141/232 (60.78%), Postives = 159/232 (68.53%), Query Frame = 0


Query: 1   MQQPPQMMPM-MPSFPPT-NITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQ 60
           MQQ PQM+PM +PSFPPT NITTEQIQKYLDENKKLI+AIL+NQNLGKLAECAQYQA LQ
Sbjct: 1   MQQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQ 60

Query: 61  KNLMYLAAIADAQPQAP-------AMPPQ-MAPHPAMQQ--GGYYMQHPQAAIMAQQ--S 120
           KNLMYLAAIADAQPQ P       AM PQ MAP+P+  Q    Y+MQ  QA  MAQQ   
Sbjct: 61  KNLMYLAAIADAQPQPPAATLTSGAMTPQAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPP 120

Query: 121 GLFPPKVPLQFGNPHQLQDPQQQLHQQHQQAMQGQMGLRPIG-GANNGMHHPHHTESTLG 180
           G+FPP+ PLQFG+PHQ  DPQQQL   HQQAMQG MG+RP+G   NNG+ H  H   T  
Sbjct: 121 GIFPPRGPLQFGSPHQFLDPQQQL---HQQAMQGHMGIRPMGLNNNNGLQHQMHHHETAL 180

Query: 181 GASAGGPPRSSGQTDGRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK 218
            A+  GP       D  G GK D  ++  +G DGQG +A   GGG    E K
Sbjct: 181 AANNAGP------NDASGGGKPDGTNMSQSGADGQGGSAARHGGGDAKTEGK 223

[Close]

BLAST of CsaV3_6G001440 vs. ExPASy Swiss-Prot
Match: Q9MAL9 (GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 8.9e-47
Identity = 126/208 (60.58%), Postives = 140/208 (67.31%), Query Frame = 0


Query: 2   QQPPQMMPMMPSFPP-TNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 61
           QQ PQM PM+PS PP  NITTEQIQKYLDENKKLI+AI++NQNLGKLAECAQYQA LQKN
Sbjct: 4   QQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQKN 63

Query: 62  LMYLAAIADAQPQAP--------AMPPQMA-PHPAMQQGGYYMQHPQAAIMAQQSGLFPP 121
           LMYLAAIADAQP  P        A+  QMA PH  MQ   Y+MQHPQA+     +G+F P
Sbjct: 64  LMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSGMQPPSYFMQHPQAS----PAGIFAP 123

Query: 122 KVPLQFGNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHP-HHTESTLGGASAG 181
           + PLQFG+P Q QDPQQQ  Q HQQAMQG MG+RP+G  NNGM H     E+ LGG    
Sbjct: 124 RGPLQFGSPLQFQDPQQQ-QQIHQQAMQGHMGIRPMGMTNNGMQHAMQQPETGLGG---- 183

Query: 182 GPPRSSGQTDGRGSGKQDSADVGGAGTD 199
                     G   GKQD AD  G G D
Sbjct: 184 --------NVGLRGGKQDGAD--GQGKD 192

[Close]

BLAST of CsaV3_6G001440 vs. ExPASy Swiss-Prot
Match: Q8L8A5 (GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-20
Identity = 79/197 (40.10%), Postives = 108/197 (54.82%), Query Frame = 0


Query: 6   QMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLA 65
           QM PMM  + P+N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ QA+LQ+NLMYLA
Sbjct: 7   QMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLA 66

Query: 66  AIADAQPQAPAMPPQMAPHPA----MQQGGYYMQHPQAAIMAQ--QSGLFPPKVPLQFGN 125
           AIAD+QPQ P++  Q           + G +Y+Q  QA    Q  Q  L   +  + +  
Sbjct: 67  AIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARSSMLYAQ 126

Query: 126 PHQLQDPQQQLHQQHQQAMQGQMGLRPI--GGANNGMHHPHHTESTLGGASAGGPPRSSG 185
             Q Q P   L  QHQQ    Q+G+     GG ++G+H              G P   SG
Sbjct: 127 QQQQQQPYATL--QHQQLHHSQLGMSSSSGGGGSSGLHILQGEAGGFHDFGRGKPEMGSG 186

Query: 186 QTDGRGSGKQDSADVGG 195
              G G G+  S+  GG
Sbjct: 187 ---GGGEGRGGSSGDGG 198

[Close]

BLAST of CsaV3_6G001440 vs. ExPASy Swiss-Prot
Match: Q6AVI1 (GRF-interacting factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.6e-19
Identity = 85/202 (42.08%), Postives = 106/202 (52.48%), Query Frame = 0


Query: 16  PTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAP 75
           PT +TT+ IQ+YLDENK+LILAILDNQN GK+ ECA+ QA+LQ NLMYLAAIAD+QP   
Sbjct: 20  PTTVTTDLIQQYLDENKQLILAILDNQNNGKVEECARNQAKLQHNLMYLAAIADSQPPQT 79

Query: 76  AMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQLHQQHQ 135
           A   Q   +  MQ G  YM    A +MA QS L   +  + +  P     P QQ  QQ  
Sbjct: 80  AAMSQYPSNLMMQSGARYMPQQSAQMMAPQS-LMAARSSMMYAQP--ALSPLQQQQQQQA 139

Query: 136 QAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRSSGQTD-----GRGSGKQDSA 195
            A  GQ+G+   GG  +G    H   S  GG   GG   S          GRG G     
Sbjct: 140 AAAHGQLGMGS-GGTTSGFSILHGEASMGGGGGGGGAGNSMMNAGVFSDFGRGGGGGGKE 199

Query: 196 DVGGAGTDGQGSAAGGRGGGGD 213
                  D +G+ +G + G G+
Sbjct: 200 GSTSLSVDVRGANSGAQSGDGE 217

[Close]

BLAST of CsaV3_6G001440 vs. ExPASy Swiss-Prot
Match: A5HEH4 (GRF-interacting factor 1 OS=Zea mays OX=4577 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.4e-15
Identity = 92/233 (39.48%), Postives = 115/233 (49.36%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQ    MM    S  P  +TT+ IQ+YLDENK+LILAILDNQN GK  EC ++QA+LQ N
Sbjct: 7   MQMNQNMMGGYTS--PAAVTTDLIQQYLDENKQLILAILDNQNNGKAEECERHQAKLQHN 66

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIAD+QP   A   Q   +  MQ G  YM  PQ+  M     L   +  + + +P
Sbjct: 67  LMYLAAIADSQPPQTAPLSQYPSNLMMQPGPRYMP-PQSGQMMNPQSLMAARSSMMYAHP 126

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPH---HTESTLGGASAGGPPRSSG 180
                P QQ     QQA  GQ+G+ P GG   G        H E+++GG  AG       
Sbjct: 127 S--LSPLQQ-----QQAAHGQLGMAP-GGGGGGTTSGFSILHGEASMGGGGAGA------ 186

Query: 181 QTDGRGSGKQDSADVGGAGTDGQGSAAGG-------RGG------GGDGEEAK 218
              G G+   ++    G G  G G+  G        RGG       GDGE  K
Sbjct: 187 ---GAGNNMMNAGMFSGFGRSGSGAKEGSTSLSVDVRGGTSSGAQSGDGEYLK 219

[Close]

BLAST of CsaV3_6G001440 vs. ExPASy TrEMBL
Match: A0A0A0K7M8 (SSXT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008810 PE=3 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 4.1e-111
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRSSGQTD 180
           HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRSSGQTD
Sbjct: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRSSGQTD 180

Query: 181 GRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK 218
           GRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK
Sbjct: 181 GRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK 217

[Close]

BLAST of CsaV3_6G001440 vs. ExPASy TrEMBL
Match: A0A1S4DTX1 (GRF1-interacting factor 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485532 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.5e-110
Identity = 215/217 (99.08%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRSSGQTD 180
           HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLG ASAGGPPRSSGQTD
Sbjct: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGSASAGGPPRSSGQTD 180

Query: 181 GRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK 218
           GRGSGKQDSADVGGAGTDGQG+AAGGRGGGGDGEEAK
Sbjct: 181 GRGSGKQDSADVGGAGTDGQGNAAGGRGGGGDGEEAK 217

[Close]

BLAST of CsaV3_6G001440 vs. ExPASy TrEMBL
Match: A0A1S4DTY1 (GRF1-interacting factor 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485532 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.9e-108
Identity = 215/220 (97.73%), Postives = 216/220 (98.18%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPP---QMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQF 120
           LMYLAAIADAQPQAPAMPP   QMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQF
Sbjct: 61  LMYLAAIADAQPQAPAMPPQNGQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQF 120

Query: 121 GNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRSSG 180
           GNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLG ASAGGPPRSSG
Sbjct: 121 GNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGSASAGGPPRSSG 180

Query: 181 QTDGRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK 218
           QTDGRGSGKQDSADVGGAGTDGQG+AAGGRGGGGDGEEAK
Sbjct: 181 QTDGRGSGKQDSADVGGAGTDGQGNAAGGRGGGGDGEEAK 220

[Close]

BLAST of CsaV3_6G001440 vs. ExPASy TrEMBL
Match: A0A6J1JX83 (GRF1-interacting factor 3-like OS=Cucurbita maxima OX=3661 GN=LOC111489667 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 1.1e-105
Identity = 207/217 (95.39%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAA+MAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAMMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRSSGQTD 180
           HQLQD QQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTE+TLGGASAGGP RSSGQTD
Sbjct: 121 HQLQDQQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEATLGGASAGGPARSSGQTD 180

Query: 181 GRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK 218
           GRG GKQDSADVGG G D QG++AGGRGGGGDGEEAK
Sbjct: 181 GRGGGKQDSADVGGTGADAQGNSAGGRGGGGDGEEAK 217

[Close]

BLAST of CsaV3_6G001440 vs. ExPASy TrEMBL
Match: A0A6J1FN71 (GRF1-interacting factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111445449 PE=3 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.5e-105
Identity = 207/217 (95.39%), Postives = 210/217 (96.77%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAA+MAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAMMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRSSGQTD 180
           HQLQD QQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTE TLGGASAGGP RSSGQTD
Sbjct: 121 HQLQDQQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEGTLGGASAGGPARSSGQTD 180

Query: 181 GRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK 218
           GRG GKQDSADVGG G D QG++AGGRGGGGDGEEAK
Sbjct: 181 GRGGGKQDSADVGGTGADAQGNSAGGRGGGGDGEEAK 217

[Close]

BLAST of CsaV3_6G001440 vs. TAIR 10
Match: AT4G00850.1 (GRF1-interacting factor 3 )

HSP 1 Score: 204.9 bits (520), Expect = 6.5e-53
Identity = 141/232 (60.78%), Postives = 159/232 (68.53%), Query Frame = 0


Query: 1   MQQPPQMMPM-MPSFPPT-NITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQ 60
           MQQ PQM+PM +PSFPPT NITTEQIQKYLDENKKLI+AIL+NQNLGKLAECAQYQA LQ
Sbjct: 1   MQQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQ 60

Query: 61  KNLMYLAAIADAQPQAP-------AMPPQ-MAPHPAMQQ--GGYYMQHPQAAIMAQQ--S 120
           KNLMYLAAIADAQPQ P       AM PQ MAP+P+  Q    Y+MQ  QA  MAQQ   
Sbjct: 61  KNLMYLAAIADAQPQPPAATLTSGAMTPQAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPP 120

Query: 121 GLFPPKVPLQFGNPHQLQDPQQQLHQQHQQAMQGQMGLRPIG-GANNGMHHPHHTESTLG 180
           G+FPP+ PLQFG+PHQ  DPQQQL   HQQAMQG MG+RP+G   NNG+ H  H   T  
Sbjct: 121 GIFPPRGPLQFGSPHQFLDPQQQL---HQQAMQGHMGIRPMGLNNNNGLQHQMHHHETAL 180

Query: 181 GASAGGPPRSSGQTDGRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK 218
            A+  GP       D  G GK D  ++  +G DGQG +A   GGG    E K
Sbjct: 181 AANNAGP------NDASGGGKPDGTNMSQSGADGQGGSAARHGGGDAKTEGK 223

[Close]

BLAST of CsaV3_6G001440 vs. TAIR 10
Match: AT1G01160.1 (GRF1-interacting factor 2 )

HSP 1 Score: 188.3 bits (477), Expect = 6.3e-48
Identity = 126/208 (60.58%), Postives = 140/208 (67.31%), Query Frame = 0


Query: 2   QQPPQMMPMMPSFPP-TNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 61
           QQ PQM PM+PS PP  NITTEQIQKYLDENKKLI+AI++NQNLGKLAECAQYQA LQKN
Sbjct: 4   QQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQKN 63

Query: 62  LMYLAAIADAQPQAP--------AMPPQMA-PHPAMQQGGYYMQHPQAAIMAQQSGLFPP 121
           LMYLAAIADAQP  P        A+  QMA PH  MQ   Y+MQHPQA+     +G+F P
Sbjct: 64  LMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSGMQPPSYFMQHPQAS----PAGIFAP 123

Query: 122 KVPLQFGNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHP-HHTESTLGGASAG 181
           + PLQFG+P Q QDPQQQ  Q HQQAMQG MG+RP+G  NNGM H     E+ LGG    
Sbjct: 124 RGPLQFGSPLQFQDPQQQ-QQIHQQAMQGHMGIRPMGMTNNGMQHAMQQPETGLGG---- 183

Query: 182 GPPRSSGQTDGRGSGKQDSADVGGAGTD 199
                     G   GKQD AD  G G D
Sbjct: 184 --------NVGLRGGKQDGAD--GQGKD 192

[Close]

BLAST of CsaV3_6G001440 vs. TAIR 10
Match: AT1G01160.2 (GRF1-interacting factor 2 )

HSP 1 Score: 171.0 bits (432), Expect = 1.0e-42
Identity = 126/242 (52.07%), Postives = 140/242 (57.85%), Query Frame = 0


Query: 2   QQPPQMMPMMPSFPP-TNITTEQIQK---------------------------------- 61
           QQ PQM PM+PS PP  NITTEQIQK                                  
Sbjct: 4   QQSPQMFPMVPSIPPANNITTEQIQKMLGGSGNFESGFQEWTLKLDACLMLLFCTFSWLD 63

Query: 62  YLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAP--------AMP 121
           YLDENKKLI+AI++NQNLGKLAECAQYQA LQKNLMYLAAIADAQP  P        A+ 
Sbjct: 64  YLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAVA 123

Query: 122 PQMA-PHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQLHQQHQQA 181
            QMA PH  MQ   Y+MQHPQA+     +G+F P+ PLQFG+P Q QDPQQQ  Q HQQA
Sbjct: 124 AQMATPHSGMQPPSYFMQHPQAS----PAGIFAPRGPLQFGSPLQFQDPQQQ-QQIHQQA 183

Query: 182 MQGQMGLRPIGGANNGMHHP-HHTESTLGGASAGGPPRSSGQTDGRGSGKQDSADVGGAG 199
           MQG MG+RP+G  NNGM H     E+ LGG              G   GKQD AD  G G
Sbjct: 184 MQGHMGIRPMGMTNNGMQHAMQQPETGLGG------------NVGLRGGKQDGAD--GQG 226

[Close]

BLAST of CsaV3_6G001440 vs. TAIR 10
Match: AT5G28640.1 (SSXT family protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.0e-21
Identity = 79/197 (40.10%), Postives = 108/197 (54.82%), Query Frame = 0


Query: 6   QMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLA 65
           QM PMM  + P+N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ QA+LQ+NLMYLA
Sbjct: 7   QMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLA 66

Query: 66  AIADAQPQAPAMPPQMAPHPA----MQQGGYYMQHPQAAIMAQ--QSGLFPPKVPLQFGN 125
           AIAD+QPQ P++  Q           + G +Y+Q  QA    Q  Q  L   +  + +  
Sbjct: 67  AIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARSSMLYAQ 126

Query: 126 PHQLQDPQQQLHQQHQQAMQGQMGLRPI--GGANNGMHHPHHTESTLGGASAGGPPRSSG 185
             Q Q P   L  QHQQ    Q+G+     GG ++G+H              G P   SG
Sbjct: 127 QQQQQQPYATL--QHQQLHHSQLGMSSSSGGGGSSGLHILQGEAGGFHDFGRGKPEMGSG 186

Query: 186 QTDGRGSGKQDSADVGG 195
              G G G+  S+  GG
Sbjct: 187 ---GGGEGRGGSSGDGG 198

The following BLAST results are available for this feature:

BLAST of CsaV3_6G001440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004138447.1	8.4e-111	100.00	GRF1-interacting factor 3 [Cucumis sativus] >KGN45750.1 hypothetical protein Csa...	[more]
XP_016899447.1	9.3e-110	99.08	PREDICTED: GRF1-interacting factor 3 isoform X2 [Cucumis melo]	[more]
XP_016899446.1	3.9e-108	97.73	PREDICTED: GRF1-interacting factor 3 isoform X1 [Cucumis melo]	[more]
XP_038885310.1	1.5e-107	97.24	GRF1-interacting factor 3-like [Benincasa hispida] >XP_038885311.1 GRF1-interact...	[more]
XP_023550144.1	1.8e-105	95.39	GRF1-interacting factor 3-like [Cucurbita pepo subsp. pepo] >XP_023550145.1 GRF1...	[more]

BLAST of CsaV3_6G001440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93VH6	9.2e-52	60.78	GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1	[more]
Q9MAL9	8.9e-47	60.58	GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1	[more]
Q8L8A5	1.4e-20	40.10	GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1	[more]
Q6AVI1	1.6e-19	42.08	GRF-interacting factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GIF1 PE=1 S...	[more]
A5HEH4	1.4e-15	39.48	GRF-interacting factor 1 OS=Zea mays OX=4577 GN=GIF1 PE=1 SV=1	[more]

BLAST of CsaV3_6G001440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7M8	4.1e-111	100.00	SSXT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008810 PE=3 S...	[more]
A0A1S4DTX1	4.5e-110	99.08	GRF1-interacting factor 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485532 PE=...	[more]
A0A1S4DTY1	1.9e-108	97.73	GRF1-interacting factor 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485532 PE=...	[more]
A0A6J1JX83	1.1e-105	95.39	GRF1-interacting factor 3-like OS=Cucurbita maxima OX=3661 GN=LOC111489667 PE=3 ...	[more]
A0A6J1FN71	1.5e-105	95.39	GRF1-interacting factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111445449 PE=...	[more]

BLAST of CsaV3_6G001440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00850.1	6.5e-53	60.78	GRF1-interacting factor 3	[more]
AT1G01160.1	6.3e-48	60.58	GRF1-interacting factor 2	[more]
AT1G01160.2	1.0e-42	52.07	GRF1-interacting factor 2	[more]
AT5G28640.1	1.0e-21	40.10	SSXT family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007726	SS18, N-terminal	PFAM	PF05030	SSXT	coord: 18..73 e-value: 3.3E-22 score: 77.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..217
None	No IPR available	PANTHER	PTHR23107:SF26	BNAA09G51550D PROTEIN	coord: 1..189
IPR044779	SS18 family	PANTHER	PTHR23107	SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN	coord: 1..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G001440.1	CsaV3_6G001440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003713	transcription coactivator activity