CsaV3_6G001230 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G001230
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 820895 .. 821549 (-)
RNA-Seq ExpressionCsaV3_6G001230
SyntenyCsaV3_6G001230
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTGCTTTTGCTGCAGATTTATGTGGGTCAATAGATCATGCCCAGATCTTGTTCTATCTTGATCCACTTGCTTATCTTCTCCACCTTAATAAAGTGAAGGAGAATAGAGGAGGAGGAGAGAGACAAAGAGAGCGAGGTGATTACCTACTGCCCTTCTCTTCTTTATGTGGTTCAAGAGATGGAAGTCAATGTTTATGGCGTTTGGTCTTGTGATTCTGCTTAAAACGATCTTTGAATATTTTTCTTTGATTTGATTTGATTTTCCTATGCATCTGGTCATCTGGGCCTGTTGGTATAACTCCAGAGGAGAAAATTTGCTGTTATATTATCGATGGTAGAGTAGGCATTTTTTGTTTACTTCTTTTCCTTTCTGAAGTCAATGACAATAAGGAAATGAAATTTTAAAGATTTTATAACTGAAGTGTTGAATAGATTTTGTTTCTCAATTAGGAGGTTTTCCTCATTTTATTGCACCATTTCCTGTAGGGCTGAGCGTCACTGTTATTATTATTGAAATGATGTTAAATCTTATGGCTATTCTCTCTTTCTATCTTTTTGAAGATGGAATTTGGTTGACTACATTTGGGAGTTTCTTGTTTTGTCGTAGGTTGTTCATTGTTCCATGTAAAAGAAGCTGTATCTGGTTTGAAGCAAC

mRNA sequence

GTTGCTTTTGCTGCAGATTTATGTGGGTCAATAGATCATGCCCAGATCTTGTTCTATCTTGATCCACTTGCTTATCTTCTCCACCTTAATAAAGTGAAGGAGAATAGAGGAGGAGGAGAGAGACAAAGAGAGCGAGGTTGTTCATTGTTCCATGTAAAAGAAGCTGTATCTGGTTTGAAGCAAC

Coding sequence (CDS)

GTTGCTTTTGCTGCAGATTTATGTGGGTCAATAGATCATGCCCAGATCTTGTTCTATCTTGATCCACTTGCTTATCTTCTCCACCTTAATAAAGTGAAGGAGAATAGAGGAGGAGGAGAGAGACAAAGAGAGCGAGGTTGTTCATTGTTCCATGTAAAAGAAGCTGTATCTGGTTTGAAGCAAC

Protein sequence

VAFAADLCGSIDHAQILFYLDPLAYLLHLNKVKENRGGGERQRERGCSLFHVKEAVSGLKQX
Homology
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BLAST of CsaV3_6G001230 vs. NCBI nr
Match: KAE8646555.1 (hypothetical protein Csa_004845, partial [Cucumis sativus])

HSP 1 Score: 127.9 bits (320), Expect = 3.1e-26
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0 

Query: 1  VAFAADLCGSIDHAQILFYLDPLAYLLHLNKVKENRGGGERQRERGCSLFHVKEAVSGLK 60
          VAFAADLCGSIDHAQILFYLDPLAYLLHLNKVKENRGGGERQRERGCSLFHVKEAVSGLK
Sbjct: 1  VAFAADLCGSIDHAQILFYLDPLAYLLHLNKVKENRGGGERQRERGCSLFHVKEAVSGLK 60

Query: 61 Q 62
          Q
Sbjct: 61 Q 61

The following BLAST results are available for this feature:
BLAST of CsaV3_6G001230 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646555.13.1e-26100.00hypothetical protein Csa_004845, partial [Cucumis sativus][more]
BLAST of CsaV3_6G001230 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G001230 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G001230 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G001230.1CsaV3_6G001230.1mRNA