CsaV3_6G001190 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G001190
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 795436 .. 795648 (+)
RNA-Seq ExpressionCsaV3_6G001190
SyntenyCsaV3_6G001190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAAATTTGGAGAAAAAAGAGTCAGGAAGAAGGTGTTTGGAGATGGGTTGAAGAGGGATTTGGCGGGAAATCAAAGAAGGAAGAAGGAAGTAATAGGAAGGGGATTAAAGAGAGAGAAAGGGAGTGGAGTAGCCATTATTGGGAACAGAGAAAGCTGCGAATTCAGAAAAAAGGAGGAATCGGGGGTTGTTTCATTGATGGATTATTGA

mRNA sequence

ATGAAAAAATTTGGAGAAAAAAGAGTCAGGAAGAAGGTGTTTGGAGATGGGTTGAAGAGGGATTTGGCGGGAAATCAAAGAAGGAAGAAGGAAGTAATAGGAAGGGGATTAAAGAGAGAGAAAGGGAGTGGAGTAGCCATTATTGGGAACAGAGAAAGCTGCGAATTCAGAAAAAAGGAGGAATCGGGGGTTGTTTCATTGATGGATTATTGA

Coding sequence (CDS)

ATGAAAAAATTTGGAGAAAAAAGAGTCAGGAAGAAGGTGTTTGGAGATGGGTTGAAGAGGGATTTGGCGGGAAATCAAAGAAGGAAGAAGGAAGTAATAGGAAGGGGATTAAAGAGAGAGAAAGGGAGTGGAGTAGCCATTATTGGGAACAGAGAAAGCTGCGAATTCAGAAAAAAGGAGGAATCGGGGGTTGTTTCATTGATGGATTATTGA

Protein sequence

MKKFGEKRVRKKVFGDGLKRDLAGNQRRKKEVIGRGLKREKGSGVAIIGNRESCEFRKKEESGVVSLMDY*
Homology
BLAST of CsaV3_6G001190 vs. NCBI nr
Match: KGN45726.1 (hypothetical protein Csa_005107 [Cucumis sativus])

HSP 1 Score: 136.7 bits (343), Expect = 7.6e-29
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0

Query: 1  MKKFGEKRVRKKVFGDGLKRDLAGNQRRKKEVIGRGLKREKGSGVAIIGNRESCEFRKKE 60
          MKKFGEKRVRKKVFGDGLKRDLAGNQRRKKEVIGRGLKREKGSGVAIIGNRESCEFRKKE
Sbjct: 1  MKKFGEKRVRKKVFGDGLKRDLAGNQRRKKEVIGRGLKREKGSGVAIIGNRESCEFRKKE 60

Query: 61 ESGVVSLMDY 71
          ESGVVSLMDY
Sbjct: 61 ESGVVSLMDY 70

BLAST of CsaV3_6G001190 vs. ExPASy TrEMBL
Match: A0A0A0KD64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008575 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 3.7e-29
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0

Query: 1  MKKFGEKRVRKKVFGDGLKRDLAGNQRRKKEVIGRGLKREKGSGVAIIGNRESCEFRKKE 60
          MKKFGEKRVRKKVFGDGLKRDLAGNQRRKKEVIGRGLKREKGSGVAIIGNRESCEFRKKE
Sbjct: 1  MKKFGEKRVRKKVFGDGLKRDLAGNQRRKKEVIGRGLKREKGSGVAIIGNRESCEFRKKE 60

Query: 61 ESGVVSLMDY 71
          ESGVVSLMDY
Sbjct: 61 ESGVVSLMDY 70

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN45726.17.6e-29100.00hypothetical protein Csa_005107 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KD643.7e-29100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008575 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G001190.1CsaV3_6G001190.1mRNA