CsaV3_6G000690 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G000690
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 452495 .. 452716 (+)
RNA-Seq ExpressionCsaV3_6G000690
SyntenyCsaV3_6G000690
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTTCCGGTGGTCGTCACCGTCCATTTCGAACTGCCATTATTCTTCCCGCCGGCGTCTTTACGCCACCCCTAACACCGACTGAACTTCTCCTCAACTCTCACATCCTTTTCATCAATGCTGATTTGGACGTCGACCCACTTTGGTCGTTCTCGTTTGGTCCATTCCTTTTCCTTCAACGTCCTGAAAGCCGCCGCCCCGGTGAATTCCATTCCCCATGA

mRNA sequence

ATGTCTTCCGGTGGTCGTCACCGTCCATTTCGAACTGCCATTATTCTTCCCGCCGGCGTCTTTACGCCACCCCTAACACCGACTGAACTTCTCCTCAACTCTCACATCCTTTTCATCAATGCTGATTTGGACGTCGACCCACTTTGGTCGTTCTCGTTTGGTCCATTCCTTTTCCTTCAACGTCCTGAAAGCCGCCGCCCCGGTGAATTCCATTCCCCATGA

Coding sequence (CDS)

ATGTCTTCCGGTGGTCGTCACCGTCCATTTCGAACTGCCATTATTCTTCCCGCCGGCGTCTTTACGCCACCCCTAACACCGACTGAACTTCTCCTCAACTCTCACATCCTTTTCATCAATGCTGATTTGGACGTCGACCCACTTTGGTCGTTCTCGTTTGGTCCATTCCTTTTCCTTCAACGTCCTGAAAGCCGCCGCCCCGGTGAATTCCATTCCCCATGA

Protein sequence

MSSGGRHRPFRTAIILPAGVFTPPLTPTELLLNSHILFINADLDVDPLWSFSFGPFLFLQRPESRRPGEFHSP*
Homology
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BLAST of CsaV3_6G000690 vs. NCBI nr
Match: KAE8646544.1 (hypothetical protein Csa_005352 [Cucumis sativus])

HSP 1 Score: 157.1 bits (396), Expect = 5.7e-35
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0 

Query: 1  MSSGGRHRPFRTAIILPAGVFTPPLTPTELLLNSHILFINADLDVDPLWSFSFGPFLFLQ 60
          MSSGGRHRPFRTAIILPAGVFTPPLTPTELLLNSHILFINADLDVDPLWSFSFGPFLFLQ
Sbjct: 1  MSSGGRHRPFRTAIILPAGVFTPPLTPTELLLNSHILFINADLDVDPLWSFSFGPFLFLQ 60

Query: 61 RPESRRPGEFHSP 74
          RPESRRPGEFHSP
Sbjct: 61 RPESRRPGEFHSP 73

The following BLAST results are available for this feature:
BLAST of CsaV3_6G000690 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646544.15.7e-35100.00hypothetical protein Csa_005352 [Cucumis sativus][more]
BLAST of CsaV3_6G000690 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G000690 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G000690 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G000690.1CsaV3_6G000690.1mRNA