CsaV3_6G000200 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G000200
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 140951 .. 141256 (+)
RNA-Seq ExpressionCsaV3_6G000200
SyntenyCsaV3_6G000200
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAGAGCGGGTTTTCGTACTGTTATTGCAAATTTCGTCTTTCTTCATTTTCTTTTAAGAATATCTTTCAATTTGGTGAGGTTTGGCTATGAAAGAAAGCCCGCCACAAGAATTATGTATCGTAGTCTAGATTTATCAAATATTATCAGCCATTTTCTGTGCTCTCATTGTAGGTTTTGCAACACTACTTACTTGGCATCTTTTGGTGGCATTCATGCAGATGCTCAAAGCTTTAAGTACATGCCGAGGAAAATGCATATATATTTTTATAATGATTTTGTTTGGAAATACCTCACTTCATAA

mRNA sequence

ATGATGAGAGCGGGTTTTCGTACTGTTATTGCAAATTTCGTCTTTCTTCATTTTCTTTTAAGAATATCTTTCAATTTGGTGAGGTTTGGCTATGAAAGAAAGCCCGCCACAAGAATTATGTATCGTAGTCTAGATTTATCAAATATTATCAGCCATTTTCTGTGCTCTCATTGTAGGTTTTGCAACACTACTTACTTGGCATCTTTTGGTGGCATTCATGCAGATGCTCAAAGCTTTAAGTACATGCCGAGGAAAATGCATATATATTTTTATAATGATTTTGTTTGGAAATACCTCACTTCATAA

Coding sequence (CDS)

ATGATGAGAGCGGGTTTTCGTACTGTTATTGCAAATTTCGTCTTTCTTCATTTTCTTTTAAGAATATCTTTCAATTTGGTGAGGTTTGGCTATGAAAGAAAGCCCGCCACAAGAATTATGTATCGTAGTCTAGATTTATCAAATATTATCAGCCATTTTCTGTGCTCTCATTGTAGGTTTTGCAACACTACTTACTTGGCATCTTTTGGTGGCATTCATGCAGATGCTCAAAGCTTTAAGTACATGCCGAGGAAAATGCATATATATTTTTATAATGATTTTGTTTGGAAATACCTCACTTCATAA

Protein sequence

MMRAGFRTVIANFVFLHFLLRISFNLVRFGYERKPATRIMYRSLDLSNIISHFLCSHCRFCNTTYLASFGGIHADAQSFKYMPRKMHIYFYNDFVWKYLTS*
Homology
[Close]
BLAST of CsaV3_6G000200 vs. NCBI nr
Match: KGN45622.1 (hypothetical protein Csa_005201 [Cucumis sativus])

HSP 1 Score: 213.0 bits (541), Expect = 1.2e-51
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MMRAGFRTVIANFVFLHFLLRISFNLVRFGYERKPATRIMYRSLDLSNIISHFLCSHCRF 60
           MMRAGFRTVIANFVFLHFLLRISFNLVRFGYERKPATRIMYRSLDLSNIISHFLCSHCRF
Sbjct: 1   MMRAGFRTVIANFVFLHFLLRISFNLVRFGYERKPATRIMYRSLDLSNIISHFLCSHCRF 60

Query: 61  CNTTYLASFGGIHADAQSFKYMPRKMHIYFYNDFVWKYLTS 102
           CNTTYLASFGGIHADAQSFKYMPRKMHIYFYNDFVWKYLTS
Sbjct: 61  CNTTYLASFGGIHADAQSFKYMPRKMHIYFYNDFVWKYLTS 101

[Close]
BLAST of CsaV3_6G000200 vs. ExPASy TrEMBL
Match: A0A0A0KB62 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G000700 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 5.8e-52
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0 

Query: 1   MMRAGFRTVIANFVFLHFLLRISFNLVRFGYERKPATRIMYRSLDLSNIISHFLCSHCRF 60
           MMRAGFRTVIANFVFLHFLLRISFNLVRFGYERKPATRIMYRSLDLSNIISHFLCSHCRF
Sbjct: 1   MMRAGFRTVIANFVFLHFLLRISFNLVRFGYERKPATRIMYRSLDLSNIISHFLCSHCRF 60

Query: 61  CNTTYLASFGGIHADAQSFKYMPRKMHIYFYNDFVWKYLTS 102
           CNTTYLASFGGIHADAQSFKYMPRKMHIYFYNDFVWKYLTS
Sbjct: 61  CNTTYLASFGGIHADAQSFKYMPRKMHIYFYNDFVWKYLTS 101

The following BLAST results are available for this feature:
BLAST of CsaV3_6G000200 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45622.11.2e-51100.00hypothetical protein Csa_005201 [Cucumis sativus][more]
BLAST of CsaV3_6G000200 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G000200 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KB625.8e-52100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G000700 PE=4 SV=1[more]
BLAST of CsaV3_6G000200 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G000200.1CsaV3_6G000200.1mRNA