CsaV3_6G000060 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAATAATATTGGGCCGAAACGGAACCGGGAATTCACCGCGGCTCAAAATTTCGACTCAAAGACCTAAACCTCGCGAGAGAAAAACCTTCCGAGTTCCGATGGCTACCACCAACAACCTCCATGGCTCTGGTACTCCTCTTTCTTTTTATGTTTTCTTCATTTTTATTTTCTATTTCTGCTTCCTTTTTCTGTTTGCTTTCATCTAACCAGAATTGTATGATTGTGATTCGAATTCACATCCAGCAAGTCATTTAATATGTATGCATTTTCTTACTCTTCGTGGCATTGTAATTCTCTTTGAGTCGAACTTTCTATTGTTTGCTGAAGACTAAGAAGCGTATTGAGGGGTTCTATTTTTTAGTATATTTGACCTGGGTATTTGCTAAATTTTAAAAATTTCACTGTGGGGTTAAGTTTCCATATACTGTTGGCTCAGAGATTTGCAATATTTGAAGGTGGGTGGGTGCTTTATGAAAACTTTTTTTTTTTTGCTATGGAAATTCAAACCCGGTTGATTTTATGTGTTTTCTAAAGTATAATTGTGTCCAGGCCTTCAGGATCGTCTAACCTATAAGCTATAATGTATAATTTTGGTATTTTTCTTTTCAATCCTTGCTGCTTAAATTTCACAATTCATCTTGTTAACTGTTTTCGTTTTTACAATACTTTCTCGTACAGGATTCCTTCAATTCTCAATGTTACATTATTTGACGTCCAAACCTTTAGGCATTTTTCATTTTTTCTTGTTTTGACCTTGGGAGTTCTGTTTTTGATCTGTACTGGGATGTGGAATTTAATTTTGAAGATCATACCTCCATGGGTAAAGATCATTTGGGTGAACAAAAGGCGTTTGTTCCTTGAAATAATTGGAGGGAGAGTCTTTCTATTGATTGGCGTTTTATCATCTTTTGTTGCCTTCTTGTTATCTTTATTTGCTGGACTATTTTTAAGTGTTTAATCTCTATTAATATTCTTACCTAACTTAATTGTCAAATTAATAGTTGATCCTCCTTACTCAAGTATTGGTTCGTGTATAGTAACATCTCATGCAAGGTTTCAGCTTTTCCTATTTTTCCTTGAAGGTTGAGTTTTTCCACATAATATGTCAGATTCTGTGAATGAAGTGCTTATGGAATCAGCTAAAGAAGGATCTGCTAATATGAGGTCAGAGGGAAAGACTAGTGACACAGGTAAGAATAGGTAGTGCGAACTTGATGTCCTTTATTGTTTCTTGTTTAATTCTTTTCCTTAACATACATATTGTGCTTTTAACATTAAATTGCGCATTAAGAGGTATGGTGCTATTCTTCTTTATCATTGTAGAAATAAAAGCACGTGTTGATTCCATGTGGGAGCAAATGAACAAAGGGGTGTCCAGCAAAACACTAAAAGGTTTGTCAACCAAACGATCTCCAGCTGTGAATAAAAACTCAAAGAAGCCATCCAATGTAAAAATTCACATTCTGCTCTTGCATAACGAGGCAGCTCAAAATATAGGAAATATATCTCATACTTTTTTCTCTCCCCATTTCCCCTGTGTCTAGAATTGGATGGCATATCTTGGTATGGCATCAAAGAAGCCTCAGGAAAAAGATACATTATCAGAAGGATCCAAGGTTCTGCAGAACAGTTCTATTGATGATGCAAAGATGCTTGCTGCTACTGCGCTCTCAGCTGTTAGGGATGCTACAGCAACTATCTCTGGCAGGGGGAAAGTTGAGGTGCCATTACTTTCATCACTATTTTTCATTTGTTTTTCTACTCTTTTAGGTGTGAATTGTGATTATCTAGGCATTTGGTTTTTTTATTGCTTTGATGCATATAGAGCTGAAAATAGTTTCTCTGGCTAGATTGGATAGTTTTTTAGAGAATCATTTGTTGTTGGGATGGAAGGAGAACATCCTTCTGTAATGATGGTGGGTAGGTTTGAAATACTCTTCTTCTTCAGTGTCTGTCTATCTCTCTCTCTGTCCTTTTTTTGGTGATTTCTCCACAGAAAGAAAAGGTCTTGGTCTTTGATGCTTGGGAAGAAGGAACTCATCCTTGGGGAATGGGTGTGAGGAAAATAGATAGGAGCTGCACTTGACTTGGTTGATGAGGTGAATCAAGGAAAGATGAAAGAGTTTAGAAGGTTGATCCATGTACAACATTGTTTGTGAAGCTACATTGCTGAAGGCCAGTACATGCTGGAAACCGAATATTTTGGTGAAGTAATTGTTTTACTGTGGATACTACAATTTAGTAGCATTTACATTACAACAAGTGAGTTGCAGAAAAGGTGTCACCTGTTGCTTTTTGAAAAAAGAGAAGAAAAAGGGTCATCCGTTACTTTAAGCTTCCTACTGCCTTTGCATAAAGGCAGGGGAGGGTTAAGCGCATTTGTCTTTTTGATGTTCATATGGCAAAAGCTGTTGGGAATCAGGATAATCCTCTTATATATTTTGGTTTCTCATAGCCTCATAGCTGTTGGACAAATGTCCTATGGGGGGTAACATCCGCAGTGTAAAGCTCAAAACCAAAGTTAAATTGTTATGGATTAATGCCACTAGATCAATCATTGGGAGGATATACTTTGAAAAAGATCAAATTGGAGAAGTTTTTGGGTGAGAGTGTATATTATTACAAATCGCCAGGCTTCTTCTTGGTGTGGCTTGTCTACCATATTTTGCACCTATACCTCCAATTTAATTTAGTTTTAGTTTTTGGGGGGCTTGTGTGGGAGGGGATTTTACGGGAGAGAGTTCTACAAGAGGTTGATAGTTCTGATATTTCAAAACTGGATTTGATTTGTGCAAACTTGCCTCCAATCAGATTGTGTGGTTTCTTTTCCTCTTTTATTTCATTTTACAATACCATTTCTTGTAAAACAGTGAAACATCAAGTTTAGGCATTTATTATATTGATCGGTTAGTTGATGAACTCAAACCATTGGCTTTTTTACTTTCAACAGATCACAGAGATTAGGGACTTTGCAGGCCAAAATGTTGAAATTAAAAAGTTTGTAGATGCGGATTCAAAAGAAGCACACGAGAAAATGAAGGCACCTGCTACTTCAGCTGTCGATGTAGTCCTCGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACGAAAAAGGACTGGGGAGAGTTTAAGGAAGAAAACAAGGGTCTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCGAACCAATATCTTGATAAAGTTTCTTTTTTGCAGCGAACCGATTACAGGGAGTTTGAACGAGAGAGGGATGCACGATTGGCTTTGCAGGCCCGACGAAGGCCTGATATGCGGGAGGAGCCATAATTAAAGTCATCATCTGAAGCTCTTTGAAGAATGTGCCCTTATTTTTAAGGTTCTGAGAATTTTCTTGTGCCCTAACTGGCGTCTGCTCTCATAGTCTTGAACAGATCAGAAAAAATTCCTATAGCGCAGTTGTTTTTCATTCTTCTGTTGTGTATAGATAAATCTTCGAGCCTTGGAAATATTAGATTGTGCTTTCATTCTTGCCATTTTTGTCCAATATTAGATTGTGCTTTCATTCTTGCCAATTTTTTCTTGAAGCAACAAGATATTAAAAACATGTGAACCAAAACAACCAAAGGCTTTAGACCCTTTTGAGAGAACAGAGCAAACCGCTTTCCAAGACCAAGAGATGAACTTGATAGAAGTAAGATTAGGGTCAGTAATTGGTTAAAGAAAGAGCATTGATATCTGAAAATTTTGTATCTATGATTTAAAAGATCGATGACTTCAAATGAGTTAAATGTCATCGACTATATTCCATGCTTCTTAGGCCAACACATTCTTGCCATTAGAGCTTGTTACAAGATTAAAAGCTAACTGTTAGGTCCATGTGCATTATTGATTAGAGGATACAACCTATGAAATAAATCATCAAATGTACAACTATAGAGTAGATGAAGTAACTAAATTAGAGTTTCCATGCTCGTGGCTAAAACTAGAGTAAATACACACCGTAAATTACAAGTGGGAAATGCATCAAAAGGTCTTTCTATTCCTTCATGTTATAGACACTCAACTGTTATTACATATTATTGTTACTGTCGCAAAAAACATAGCAGATTTATCTGCTTTCCAAGATAGCAAAAAGAAATATAAACTCGCCAACAAGTGATTTGCAACTCGTCAAAGTAAAAAAAATGCGGCGATCTTCTAGATGTGAATGGGCTTGTCATAAGTTGCCATAGCAGCCTCCTTCAGTGCCTCGCTCATTGTAGGATGTGCATGGCAAACTCGAGCTATATCCTCACTTGCTGCATCATATTGTAAGGCCAATACTGCCTCATGTATAAGCTCCCCAGCATTAGGAGCCATGATATGGACACCAAGTATCTTGTCTGTCTCCTTTTCAGCCAGAATTTTCACCACCCCTTCAGCGTCGTCTATTGCTTTTGCCCTACTATTTGCCAAGAACGGAAACTTCCCAACACAATAATCTACACCTGATTCCTTCACTTGCTCTTCTGTCTTCCCAACAGATGCAACTTCCGGATGTGTATAGACAACCCCTGGGACTTTGTCGTAGTCAACATGGCCTGTCTTCCCAGCTATGAACTCGACACAGGCAACCCCATCCTCTTCAGCCTTGTGAGCTAGCATTGGCCCTGGAATTACGTCCCCAATTGCGTAAACACCATCCACATTCGTAGCAAATCTTTCATTTACCAAAATGCGTCCTGCCTTATCAGTTTCGATTCCTAGCTTGTCTAGTCCGAGTCCAGCAGTGAACGGGGTTCTACCTGCAGATACAAGAACAACATCTGCTTCAAGTGTCGTCTGTTCACCACCAGCCGCAGGTTCGAGAGTCAGCTTCACACCGTCCCTTGATGTATCAACCCCAACCACTTTAGTTCTTAGCATGAATTTCATTCCTTGCTTTTCAAGGGA ATGGCTACCACCAACAACCTCCATGGCTCTGATTCTGTGAATGAAGTGCTTATGGAATCAGCTAAAGAAGGATCTGCTAATATGAGGTCAGAGGGAAAGACTAGTGACACAGAAATAAAAGCACGTGTTGATTCCATGTGGGAGCAAATGAACAAAGGGGTGTCCAGCAAAACACTAAAAGGTTTGTCAACCAAACGATCTCCAGCTGTGAATAAAAACTCAAAGAAGCCATCCAATAATTGGATGGCATATCTTGGTATGGCATCAAAGAAGCCTCAGGAAAAAGATACATTATCAGAAGGATCCAAGGTTCTGCAGAACAGTTCTATTGATGATGCAAAGATGCTTGCTGCTACTGCGCTCTCAGCTGTTAGGGATGCTACAGCAACTATCTCTGGCAGGGGGAAAGTTGAGATCACAGAGATTAGGGACTTTGCAGGCCAAAATGTTGAAATTAAAAAGTTTGTAGATGCGGATTCAAAAGAAGCACACGAGAAAATGAAGGCACCTGCTACTTCAGCTGTCGATGTAGTCCTCGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACGAAAAAGGACTGGGGAGAGTTTAAGGAAGAAAACAAGGGTCTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCGAACCAATATCTTGATAAAGTTTCTTTTTTGCAGCGAACCGATTACAGGGAGTTTGAACGAGAGAGGGATGCACGATTGGCTTTGCAGGCCCGACGAAGGCCTGATATGCGGGAGGAGCCATAA ATGGCTACCACCAACAACCTCCATGGCTCTGATTCTGTGAATGAAGTGCTTATGGAATCAGCTAAAGAAGGATCTGCTAATATGAGGTCAGAGGGAAAGACTAGTGACACAGAAATAAAAGCACGTGTTGATTCCATGTGGGAGCAAATGAACAAAGGGGTGTCCAGCAAAACACTAAAAGGTTTGTCAACCAAACGATCTCCAGCTGTGAATAAAAACTCAAAGAAGCCATCCAATAATTGGATGGCATATCTTGGTATGGCATCAAAGAAGCCTCAGGAAAAAGATACATTATCAGAAGGATCCAAGGTTCTGCAGAACAGTTCTATTGATGATGCAAAGATGCTTGCTGCTACTGCGCTCTCAGCTGTTAGGGATGCTACAGCAACTATCTCTGGCAGGGGGAAAGTTGAGATCACAGAGATTAGGGACTTTGCAGGCCAAAATGTTGAAATTAAAAAGTTTGTAGATGCGGATTCAAAAGAAGCACACGAGAAAATGAAGGCACCTGCTACTTCAGCTGTCGATGTAGTCCTCGAACAAATCAAGAAGAAACAAAAGCTTAGTGTTCTTGACAAGACGAAAAAGGACTGGGGAGAGTTTAAGGAAGAAAACAAGGGTCTGGAAGAGGACTTGGATGCTTACAAGAAGAGCTCGAACCAATATCTTGATAAAGTTTCTTTTTTGCAGCGAACCGATTACAGGGAGTTTGAACGAGAGAGGGATGCACGATTGGCTTTGCAGGCCCGACGAAGGCCTGATATGCGGGAGGAGCCATAA MATTNNLHGSDSVNEVLMESAKEGSANMRSEGKTSDTEIKARVDSMWEQMNKGVSSKTLKGLSTKRSPAVNKNSKKPSNNWMAYLGMASKKPQEKDTLSEGSKVLQNSSIDDAKMLAATALSAVRDATATISGRGKVEITEIRDFAGQNVEIKKFVDADSKEAHEKMKAPATSAVDVVLEQIKKKQKLSVLDKTKKDWGEFKEENKGLEEDLDAYKKSSNQYLDKVSFLQRTDYREFERERDARLALQARRRPDMREEP* Homology
BLAST of CsaV3_6G000060 vs. NCBI nr
Match: XP_004138527.1 (craniofacial development protein 1 isoform X1 [Cucumis sativus] >KGN45609.1 hypothetical protein Csa_004824 [Cucumis sativus]) HSP 1 Score: 479.9 bits (1234), Expect = 1.3e-131 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0
BLAST of CsaV3_6G000060 vs. NCBI nr
Match: XP_008458319.1 (PREDICTED: LOW QUALITY PROTEIN: craniofacial development protein 1 [Cucumis melo]) HSP 1 Score: 466.5 bits (1199), Expect = 1.5e-127 Identity = 251/259 (96.91%), Postives = 255/259 (98.46%), Query Frame = 0
BLAST of CsaV3_6G000060 vs. NCBI nr
Match: XP_004138528.1 (craniofacial development protein 1 isoform X2 [Cucumis sativus]) HSP 1 Score: 461.5 bits (1186), Expect = 5.0e-126 Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 0
BLAST of CsaV3_6G000060 vs. NCBI nr
Match: TYK02974.1 (craniofacial development protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 449.9 bits (1156), Expect = 1.5e-122 Identity = 243/250 (97.20%), Postives = 247/250 (98.80%), Query Frame = 0
BLAST of CsaV3_6G000060 vs. NCBI nr
Match: XP_038906898.1 (craniofacial development protein 1 isoform X1 [Benincasa hispida]) HSP 1 Score: 445.7 bits (1145), Expect = 2.8e-121 Identity = 240/259 (92.66%), Postives = 250/259 (96.53%), Query Frame = 0
BLAST of CsaV3_6G000060 vs. ExPASy Swiss-Prot
Match: Q9UEE9 (Craniofacial development protein 1 OS=Homo sapiens OX=9606 GN=CFDP1 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 7.7e-13 Identity = 80/256 (31.25%), Postives = 123/256 (48.05%), Query Frame = 0
BLAST of CsaV3_6G000060 vs. ExPASy Swiss-Prot
Match: Q75QI0 (Craniofacial development protein 1 OS=Gallus gallus OX=9031 GN=CFDP1 PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.0e-12 Identity = 63/195 (32.31%), Postives = 101/195 (51.79%), Query Frame = 0
BLAST of CsaV3_6G000060 vs. ExPASy Swiss-Prot
Match: Q60FC2 (Craniofacial development protein 1 OS=Tragulus javanicus OX=9849 GN=CFDP1 PE=2 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 8.5e-12 Identity = 54/135 (40.00%), Postives = 78/135 (57.78%), Query Frame = 0
BLAST of CsaV3_6G000060 vs. ExPASy Swiss-Prot
Match: Q4ADK4 (Craniofacial development protein 1 OS=Muntiacus reevesi OX=9886 GN=CFDP1 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.2e-11 Identity = 78/258 (30.23%), Postives = 122/258 (47.29%), Query Frame = 0
BLAST of CsaV3_6G000060 vs. ExPASy Swiss-Prot
Match: O88271 (Craniofacial development protein 1 OS=Mus musculus OX=10090 GN=Cfdp1 PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 7.2e-11 Identity = 80/277 (28.88%), Postives = 131/277 (47.29%), Query Frame = 0
BLAST of CsaV3_6G000060 vs. ExPASy TrEMBL
Match: A0A0A0K9U3 (BCNT-C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G00090 PE=4 SV=1) HSP 1 Score: 479.9 bits (1234), Expect = 6.5e-132 Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0
BLAST of CsaV3_6G000060 vs. ExPASy TrEMBL
Match: A0A1S3C8V1 (LOW QUALITY PROTEIN: craniofacial development protein 1 OS=Cucumis melo OX=3656 GN=LOC103497769 PE=4 SV=1) HSP 1 Score: 466.5 bits (1199), Expect = 7.5e-128 Identity = 251/259 (96.91%), Postives = 255/259 (98.46%), Query Frame = 0
BLAST of CsaV3_6G000060 vs. ExPASy TrEMBL
Match: A0A5D3BUX3 (Craniofacial development protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00590 PE=4 SV=1) HSP 1 Score: 449.9 bits (1156), Expect = 7.2e-123 Identity = 243/250 (97.20%), Postives = 247/250 (98.80%), Query Frame = 0
BLAST of CsaV3_6G000060 vs. ExPASy TrEMBL
Match: A0A6J1H4U3 (craniofacial development protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460409 PE=4 SV=1) HSP 1 Score: 445.3 bits (1144), Expect = 1.8e-121 Identity = 241/261 (92.34%), Postives = 251/261 (96.17%), Query Frame = 0
BLAST of CsaV3_6G000060 vs. ExPASy TrEMBL
Match: A0A6J1KYB0 (craniofacial development protein 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499305 PE=4 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 4.4e-120 Identity = 238/261 (91.19%), Postives = 251/261 (96.17%), Query Frame = 0
BLAST of CsaV3_6G000060 vs. TAIR 10
Match: AT5G30490.1 (CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). ) HSP 1 Score: 213.4 bits (542), Expect = 2.2e-55 Identity = 134/242 (55.37%), Postives = 175/242 (72.31%), Query Frame = 0
BLAST of CsaV3_6G000060 vs. TAIR 10
Match: AT5G30490.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source: NCBI BLink). ) HSP 1 Score: 213.4 bits (542), Expect = 2.2e-55 Identity = 134/242 (55.37%), Postives = 175/242 (72.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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