
CsaV3_5G040240 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATGTATGGCGGGGGGATGCAGGTTCTGATCAGGATCAACCAAGAACATGTCCAGTGAAATTTGCATCAACAGGGACATGTCAAGAGCCATATGGAACAGCAGGATGTTACGACGAAGTCATGGGAAAATATGGAAATTTCCCACCAAAGGACTGTCAATGCATTCCTAATGGCGATAATTCTCGCTTTTGCCAATGCAATATCTATTGTTAA ATGTATGTATGGCGGGGGGATGCAGGTTCTGATCAGGATCAACCAAGAACATGTCCAGTGAAATTTGCATCAACAGGGACATGTCAAGAGCCATATGGAACAGCAGGATGTTACGACGAAGTCATGGGAAAATATGGAAATTTCCCACCAAAGGACTGTCAATGCATTCCTAATGGCGATAATTCTCGCTTTTGCCAATGCAATATCTATTGTTAA ATGTATGTATGGCGGGGGGATGCAGGTTCTGATCAGGATCAACCAAGAACATGTCCAGTGAAATTTGCATCAACAGGGACATGTCAAGAGCCATATGGAACAGCAGGATGTTACGACGAAGTCATGGGAAAATATGGAAATTTCCCACCAAAGGACTGTCAATGCATTCCTAATGGCGATAATTCTCGCTTTTGCCAATGCAATATCTATTGTTAA MYVWRGDAGSDQDQPRTCPVKFASTGTCQEPYGTAGCYDEVMGKYGNFPPKDCQCIPNGDNSRFCQCNIYC* Homology
BLAST of CsaV3_5G040240 vs. NCBI nr
Match: KGN52689.1 (hypothetical protein Csa_008701 [Cucumis sativus]) HSP 1 Score: 169.5 bits (428), Expect = 1.1e-38 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of CsaV3_5G040240 vs. NCBI nr
Match: KGN52690.1 (hypothetical protein Csa_007932 [Cucumis sativus]) HSP 1 Score: 103.2 bits (256), Expect = 9.5e-19 Identity = 41/60 (68.33%), Postives = 47/60 (78.33%), Query Frame = 0
BLAST of CsaV3_5G040240 vs. NCBI nr
Match: KAG6607502.1 (hypothetical protein SDJN03_00844, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 82.0 bits (201), Expect = 2.3e-12 Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 0
BLAST of CsaV3_5G040240 vs. NCBI nr
Match: KAG6607501.1 (hypothetical protein SDJN03_00843, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 80.9 bits (198), Expect = 5.0e-12 Identity = 32/59 (54.24%), Postives = 41/59 (69.49%), Query Frame = 0
BLAST of CsaV3_5G040240 vs. ExPASy TrEMBL
Match: A0A0A0KUV4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650540 PE=4 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 5.2e-39 Identity = 71/71 (100.00%), Postives = 71/71 (100.00%), Query Frame = 0
BLAST of CsaV3_5G040240 vs. ExPASy TrEMBL
Match: A0A0A0KSV3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650550 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 4.6e-19 Identity = 41/60 (68.33%), Postives = 47/60 (78.33%), Query Frame = 0
BLAST of CsaV3_5G040240 vs. TAIR 10
Match: AT4G15735.1 (SCR-like 10 ) HSP 1 Score: 42.7 bits (99), Expect = 1.4e-04 Identity = 20/62 (32.26%), Postives = 34/62 (54.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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